EMLSAT00000000472, EMLSAT00000000472-696319 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000472
Unique NameEMLSAT00000000472-696319
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s106supercontigLSalAtl2s106:814214..816498 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000472 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000472EMLSAG00000000472-683238Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002077EMLSAE00000002077-711005Lepeophtheirus salmonisexon
EMLSAE00000002078EMLSAE00000002078-711006Lepeophtheirus salmonisexon
EMLSAE00000002079EMLSAE00000002079-711007Lepeophtheirus salmonisexon
EMLSAE00000002080EMLSAE00000002080-711008Lepeophtheirus salmonisexon
EMLSAE00000002081EMLSAE00000002081-711009Lepeophtheirus salmonisexon
EMLSAE00000002082EMLSAE00000002082-711010Lepeophtheirus salmonisexon
EMLSAE00000002083EMLSAE00000002083-711011Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779810auto779810Lepeophtheirus salmonispolypeptide
EMLSAP00000000472EMLSAP00000000472Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000472

>EMLSAP00000000472 ID=EMLSAP00000000472|Name=EMLSAP00000000472|organism=Lepeophtheirus salmonis|type=polypeptide|length=539bp
MASSSSSSASAXXARRGXRKLSXIVIETFVKSKEXSPTSAGDESHNNDDH
INFFSGNPFIENTKGILHLFKENETTSLEDGVIRSQMICMLGVPAKIKTP
DLLQFTAPCHTELEMVRIIHDGSPNQYMALFRFRCLEAADEFYQAFNGAA
FNSFEPDICTLVYVSKVETCKESEYYPLTDHTELPLCSICLERMDESVST
VLTILCNHTFHGSCLAKWEDLSCPVCRYVQTPEVVAEQKCSECQSCEDLW
ICLICGYVGCGRYVGGHSHAHFLATQHCYTMELDQRRXWDYVGDNFVHRL
VQTDSADGKLVEAQGNGEGDNSERKGNDSLSVNTEEKMDSIQLEYTFLLT
SQLESQRRYYEEKITRVEDKTQREIEEISEQLKTLSEDNSSLRSKVDALS
KDKNKSDKKMTALTSKYNKALADLKEERHMNEHLRNNQTEISSTLKETIQ
FRDDTQKRMLELEDKIRDMQFHVEVVKQIDESELADEIQLGSLDSSVGAT
FGDVSEKDWEVTLNRISSPGSIKRSCFPPSSVGYSQTQT
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mRNA from alignment at LSalAtl2s106:814214..816498-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000472-696319 ID=EMLSAT00000000472-696319|Name=EMLSAT00000000472|organism=Lepeophtheirus salmonis|type=mRNA|length=2285bp|location=Sequence derived from alignment at LSalAtl2s106:814214..816498- (Lepeophtheirus salmonis)
ATGGCTTCGTCCTCTTCATCATCTGCTTCGGCTGKTGSTGCGCGAAGAGG
GRCTCGGAAATTGTCTGRTATTGTCATTGAAACATTCGTCAAATCCAAGG
AGKCCTCACCTACTTCTGCTGGAGATGAGTCTCATAACAATGATGATCAC
ATTAACTTCTTCTCAGGAAATCCATTCATCGAAAATACCAAAGGAATACT
ACATCTTTTCAAAGAAAACGAAACAACGTCCCTTGAAGATGGGGTTATTC
GAAGTCAAATGATTTGTAATAACTCACATTTAATTGAAATCCACAAAATA
TATGGGCCTTTGAAATATATATCCTTAAAGGCCCATAATTCAAGATTTCA
TTCATATATATAAATTCATTTAAAAAAAAAGTTAATCATATAATTATTGT
TTAATAATTTTGTTACAGGTATGCTCGGAGTTCCCGCTAAAATCAAAACA
CCAGATCTACTCCAATTTACTGCGCCCTGTCATACTGAACTTGAAATGGT
TCGCATTATTCATGATGGTAGTCCTAATCAGTATATGGTATAACTTTTGC
TTTTGTAACAAATTTAATAATAACTATGTATGTTTATATTTTTATAGGCC
CTATTCCGTTTTCGATGCTTGGAAGCAGCAGATGAGTTTTACCAAGCGTT
TAACGGAGCAGCATTTAATTCATTTGAACCTGATATATGCACTCTAGTTT
ATGTGTCAAAAGTTGAAACCTGTAAAGAATCGGAATACTATCCCCTCACT
GATCATACGGAGCTACCACTATGCAGCATCTGTTTAGAGCGTATGGATGA
ATCAGTATCCACGGTTCTCACCATACTTTGTAATCATACATTTCACGGGT
CATGTCTGGCTAAATGGGAGGACTTGAGTTGTCCAGTTTGCCGATACGTA
CAAACTCCTGAAGTGGTTGCAGAGCAAAAATGCTCAGAGTGTCAATCATG
TGAAGACTTGTGGATATGTCTCATTTGCGGTTATGTTGGATGTGGAAGAT
ACGTTGGAGGKCATTCACATGCCCACTTCCTTGCTACTCAACATTGTTAC
ACTATGGAGTTGGATCAAAGGAGAGKATGGGATTATGTAGGTGATAATTT
CGTTCATCGATTGGTTCAAACGGACTCTGCAGATGGGAAATTGGTCGAAG
CACAAGGTAACGGAGAGGGAGATAACTCTGAGAGGAAAGGAAATGACAGT
CTCTCTGTAAATACAGAAGAAAAAATGGACTCTATACAGCTAGAGTATAC
GTTCCTACTTACATCACAATTAGAGTCCCAAAGAAGGTATTTTTGATTAT
TATTCTTGTTTCATATATATGTACATTTTTTGGGGGTTTTTATGTATAGA
TATTATGAAGAAAAAATTACGCGGGTTGAAGATAAGACGCAAAGGGAAAT
AGAAGAAATTAGCGAACAGTTAAAAACACTAAGTGAAGATAATAGTTCTC
TAAGATCTAAAGTGGATGCCCTCTCAAAAGACAAGAATAAAAGTGACAAA
AAGATGACCGCTCTTACATCCAAATATAACAAAGCACTCGCAGACCTCAA
AGAAGAACGTCACATGAATGAACATTTGCGCAATAACCAAGTAGGAATTG
ATACATTTATATATATATTTTTTAAAAATGCCGTTTACAAATATGACATC
ATTTCAGACGGAAATATCTTCCACTCTTAAAGAAACCATTCAGTTCAGGG
ATGACACCCAAAAGAGAATGTTGGAGCTTGAGGTACGTATCTATGTTTAA
ATGTTTTTATTTGTTTTAAGACCTGATCCATTTGATTGGTTTCAGGATAA
AATAAGAGATATGCAATTCCACGTAGAAGTTGTTAAACAAATCGATGAGT
CTGAGTTAGCTGACGAGATTCGTGGCGGGGATATTATTATTYCTCCAACT
CCAGAGACGGGKGKACGTTTAAAGACGCGTAGGAACCGTAGAGGACATAA
AWAAATATATATATATGGCAATATCCATTCTGAATGAAGACTTTTGTTGT
TTTTCAACATAATAAAAGAAAATTAATTTACATACATATAAGACGAAATA
TAACTAAGTATTCCACCAATTTATTAATCCTAGACCGGGTCCATTTACAG
AGGCAGTGATGGTATAAGGTATTTTCTCAGAGTTAGGCTCACTTGATTCC
TCAGTGGGCGCTACATTTGGAGATGTGTCGGAAAAGGATTGGGAAGTGAC
TCTGAATCGAATTTCTTCCCCAGGATCCATAAAGAGATCATGTTTTCCCC
CATCTTCTGTCGGGTATTCCCAGACCCAAACTTGA
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