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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1071 | supercontig | LSalAtl2s1071:54573..60571 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000478 >EMLSAP00000000478 ID=EMLSAP00000000478|Name=EMLSAP00000000478|organism=Lepeophtheirus salmonis|type=polypeptide|length=387bp
MQTHFQVLIFPSLFHSSSCVIYQVMMDIDMTCLRSEGYPCEVYKVTTDDG
YILEMHRIPHGINNQNISETRPVVFVQHGLLSSSADWVIAAPKKALGYIL
ADAGYDVWMGNFRGNSYSRNHLTLKPSKIRFWKFSWDQMAKYDLPAMLKK
TMSLTNSSQIQFVGHSMGTTVFMAMLNIYPDMKEHFHLAHFLSPIAYISH
TISPIKYFAKFGNEIGWVLNHLGAGEFLPSRWLMNVLSALFCKPGMNHIC
KSTIFLLCGYDHAQTNSSLLPTIIQHTPAGTSTYTVVQYAQEFNTGDFKA
MDWGKKQNIKYHGSEVPPRYQIEAVDVPVADVIHVVNRLPQLYDDYIVPY
DDWNHVDFLWAIDADRFLYKKLIDNMKRYENKDILKK back to topmRNA from alignment at LSalAtl2s1071:54573..60571- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000478-696325 ID=EMLSAT00000000478-696325|Name=EMLSAT00000000478|organism=Lepeophtheirus salmonis|type=mRNA|length=5999bp|location=Sequence derived from alignment at LSalAtl2s1071:54573..60571- (Lepeophtheirus salmonis)
AACGCAACTTAAAATGCAAACTCATTTTCAAGTCCTCATTTTTCCATCTC
TCTTCCATTCCTCGTCTTGTGTGATATATCAAGTCATGATGGATATAGAC
ATGACTTGTCTCCGGTAAGATATTAAACTTTATATTAATTCTTCATAAAC
ACGAGTAGATATTGATTTGTTTTTTGACACTTTACACGTAACAAACACAT
GGACTTTTTTGTTTGTTAAATGTGAGAGACTACACACGTACAACCATCCA
TAACAGRAAAAAAAAATACTATTACATAAATATTACGTTGTTGTGATATG
ATATTTCATTCTAGTTGTGTTTAAAGTTTGCTTTGAATGATTGTTGTAGA
GCTCTTAGCCCTTTTGGTCAGGTWAATTGAGGCAGCTTCAAATCATCATG
CAGCNAGCTGTATATTTCATAGATATAATATTCTTGGATACACACTTAAT
GTCTTAGAAAATATGATCAATATCCTGTGCAAGATTTTTTAGTATTTGGT
GATTTGAGTAGTGTTTTTATTTTGCAAAACTGTTCTTTAATTCTTGAGGA
GAGAATATCTAATTAGAAGGTGTAACCAAGAGTGTGTGTGCCCATGAAAG
ACAACGAGTAATACTGAAGATTTGTGGAGGAGTTATATGGGTAAATCCGT
GTTTGACATGTATTCATTCCATTCATCCTATAGCTGTTGAAAGGGTTAAA
GAGGCGTCTGCAGGGTTGTATTTTGAAGAAGGCTAGGTTTCTATACTTAT
TCGCAAGGAATTAAGTTGTTGAAATTTTTTTTAGCTCTTCACAAAAATTA
TTTTTTTTTTGTAAAAATATTTCAAAAATTAAATTTTTGGAAAAAAAATT
CCAATATAAACTATTTTTTTCCCAAAAATCCAATGTTATTCACAAAGAAT
TAAATTTTTCGTAAATTTTATTCAAAAATTCATTSATATTCTCAAAAAAT
TTCAAATATTATTTTTTTTTGAATTTTTTGTCTAAAATGCTTAGTTATTC
TCACAAAAATTCAAATATTAAAATTTTTTTTACAGCTGTTCACTAAAAAT
TAAATTTAATTTCCAATATTAACTTTTTGAAATTTTTTTCCGAAAATCCA
ATGTTATTCACAAAGAATTAAATTTTTTGTAAGTTTTATTCAAAAATTCG
TTCATATTCTCAAAAAATTTCAATTATTATTTTTTTTTGAATTTTTTTTC
TAAAATGCATAGTTATTCTCACAAAATTCAAATATTATATATTTTTTTTG
AATTTTTTTTTTACAACTGTTGACAAAAAATCAAATTTTTTAGAATAACA
TTTCTAAAATAAAATTTTTAACACAACATTTCTAAAATTAAATTTTGGAA
AATAAGTTCCAAAATCATCTGCTATTCACAAAAAAATAATTTTTTGAAAA
ATGCATTTTTATGTTTAAAAAATTTCGAATATTACATTTTTTTTGGAAAT
AAGAATAAAAAATCCATAGTTATTCTCAAAAATTTATATTTTGTGGAAAA
ACATTTCAATTATCCACAGCTGCTCAGGAAAAATTAAATTGTATGTAAAA
AAATTTCCAAAATTAATTTTCCAAAATAAAATATTTTACAAAAAAAAAAA
CAATTCAAATATTACATTTTCTAGTAAAGAGCAAAAATTCCTTAATTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNACATGAACTTGTCGGTCTGACAGA
AAAGAAAATGAAAATCTGCAAAGTAATCCTGATAATTGAAATAATTCTTT
ATAGGAGACAGTTTAGCAGTCGTCTCGTTTCATTATATTCGCTGCGAGCA
GCGATGGGATGAAGGAAATCAACATAATGCAACATCATGCAATTACTCTG
TTTTCCATCCTCAACCAGGACTTGCATTTATTAAAGCAACTACTTATGTT
CGTCTTTTACGCACTAGCATTTACATTAAACTTAAATGTTCATTCATTAA
TAAGGGAAGAATAATGACACCTGCTTTGAAAAATAAAACACACTCTTCAT
GTGGCATCAACAAAAAGTTTTGCACTCGTCAAAGGTCATATTTAAAAAAA
AATCTACTTATAATTATTCCATAAACTCAATATTAATAATATTTAATAAT
ATTATTTCGTCTTCCCATTATTTTTTTCAGCCACAAATAATTAGATCTGA
GGGTTATCCTTGTGAAGTCTACAAAGTCACGACAGATGATGGATATATTT
TGGAAATGCATCGAATCCCTCATGGGATTAACAATCAAAATATTTCAGAG
ACTCGACCTGTAGTCTTTGTTCAACATGGACTATTATCTTCATCTGCTGA
TTGGGTTATAGCCGCGCCCAAAAAGGCCTTAGGTTTGTATTTATTTTATT
GCATGTATCTACTATGTAATGCTTTACTGGGTTTAATTTCCGCTGATGCC
ATTTTCTGCATAAATCAACACACATTACGTTTATGTTTAAGCACATAATT
TATTATTGAACAAATACAGAAGTATGTGATTTAGGGGAGACCGAGAATAG
TTGAAACATGGGACAGTCCGTAGAATTATATTTTGGAGAGGGATTGATTT
TTCCACAGAACCACACAGATATTTAAATCAAGTTAACTTTTGTAAAAATT
TCAAAAATCCAAAGCTATTCAATTAAAATTATATTTTTATGGAAAAAAAC
TCCAAAAATCCACAGATATTCACAAAAATTAAATTTTTTGGAGAAAAATT
TCAAAAAAACCATAGCTATTCAAAGAAAATTTTTTTATAAAAAAATTTGA
ACAATGATAATTAGCAATAAAATTAAAATACAATTTTTTTAGTTAATAAT
TTCAAAAATCAATTGCTAGTCTCTAAAAATTATATTTTTTGGATAAGAAA
AATTCAAAATTTTACGGAGGTTTACAAAAAATTTCAAAAATCCCCAGCTG
TCTATAAAAAATTAAAGTTTTTATAAAAAAATTCAAAAATCCATAGCCAT
TTACAGGAAATTAAATTTTTTAGAAAAAAATTTGAAAAATTAAACAATAT
TTAAATATTAATTTTTATGGAGAAACATTCAAAAATCAATAGCTATTTAC
AGACAATAAAATTTAGGGAAAAAATTGGAAAAATCCTTTTCTTTGGATGA
AAAAATTGAAATTTTTTTTCATCTGTTTAAAAAAGAAGTTGAAATATTAA
ATTTTCTAGTAAAATGCAAAAATTTCTTAATTTGTTGAGGGGGCAATAGC
CCCTCCAGCACAACCCCAGCAACGCCACTGCAATCCCCCTTCCTTGCACA
TCAAACAAAGCTAAAGCCACAAAACTTATATTACTATTTTATGATGCAGA
TTATTATTGAAAGATAGTCAGTTATTTTTTTTTTTAATTTCCTTCAAAAT
ATCGGATAAAAATAGATTTTGAAAAATAAAAGTGTTTTCTTTTTTTGGAG
AAGGAATATTTTTGTAATACTACAGTTAGCTTTTCATTGTTTTACTGTAA
CTTAAAACTTTTCAATCATTTACTATTAGCTGTTTAAATTGATAAGGTAG
AGTAACGCAAAGAGGTCAACAGCAACAAGGGACGTAATTTCCTTGCATTG
ATTGCGTCAATAATTATAATTTTGTGATATAGTCTGGATATTCTGGATAA
GTCTAAGAGTTTTAGGGTAGAACCGGAGGTATGTTGACCATATCAGCCAT
TTTGCATTGTTAGTTTGTGTTTGAAAGATAAAAAGGTTCGACGTTTTTGA
TGTGTTCTGCAATTTTCTAGTATTGAAAAAAAAATCGAAAGAAAAAATAT
TTGTGGAAACATTTTTAAACACTTTTGAAAGATTCTTTATTCTTCTAAAA
TAGTTATTTTTTACAAAATGCTAAATAAATTCGGATTTAGAAAATCAACC
TCTATATTAAAAAATTAGAAATATAATTATTTTTAAAGAAGCAGTATAGG
TACCACAGGGGAGTCTGCAGTTGTTTGAATAGAGGGGCTGTGGKCCCTCC
CCCCAAAAGTAATTTTCTCTTTTAGAATAATTTTTTTTTTGGTCAGGATG
AAATAATTTTTTCACAAAATAAGGGGTAAATATTTTTAGTTGAACGATTT
CAATTTTTTTTTCGGAAAAAACTTATATTTGAAATTAAATTTCAAATATA
AGTTTTTTCCAAAAATTAACTATTTGAAATATAATTTTTGAAGATTTTTT
TTTTCCAAAAAATGTAACTCTTTTTTTTTTATGATTTCTGTTTGTATCTT
TTTCGTAAAAATTTTAAAAACCAAGACTTCCCTACCCAAAAATATATATA
TATAATCCTGCGAACGCCCCTGTACCAGTATCGGAGGTATTAGGCAAGGA
ATAGTCGAAAATAAACGTTTACAAATTGACTTAATCTTTTTCTTCTAAAA
ATAGGATGAAAACTCCAAACGTCACCTACGTAAAAGTTTCCATTTGTATC
TAATAACATACCACATTTACCTTTTTGATTATAAAATATTTTAGGATGTT
TAAATTTGAAAATCCTATCCTAGGATTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC
TCAGTACGATGATTATTTAGTATTAAGAAAATGTTTTTAATGTTACTATT
TGATCCAATGATACATAGCTTTTAATTGATAATATATACATAACTTAACT
TGGAAATCCATTTTGAGCTATCATAATATAATGCTCAATTGACAATTGAT
TCGCCCCCCCCCCCCCTCCTCTTTGTGTTCCCTTTCTAAAGGAATGGTCA
ACATTCACCGTAGGTCTACAAAAATCATTTAAAATCGAATTTAAAAAATA
TACTTGTCGAACTTCGTCGCAAAACTAAATTCTATGTATTAACATGCCTT
CTCATACCTTTATAGGTTATATTCTTGCGGATGCAGGTTATGATGTTTGG
ATGGGGAATTTCCGGGGAAATAGCTATTCCCGGAATCACTTGACTCTCAA
ACCATCAAAAATTAGATTTTGGAAATTTTCGTAAGTGGTGATTAAATAAT
TATTATAATAAACATACATATATATCATGTCTACAGATGGGACCAAATGG
CAAAGTACGATTTGCCAGCCATGCTAAAGAAGACAATGTCATTGACCAAC
AGCTCCCAAATTCAATTCGTCGGCCATTCCATGGGCACCACGGTATTCAT
GGCCATGCTTAACATTTATCCAGATATGAAAGAACACTTTCATTTGGCTC
ATTTCCTTTCACCAATTGCTTATATTTCTCATACCATTAGTCCCATCAAA
TACTTTGCAAAATTCGGGAACGAGATTGGGGTAAGGGAGTAAATGTTACC
AATGTATGACTGAGTAGAGTCAATCGTTGTTTCTTTGCAGTGGGTCCTTA
ATCATCTCGGAGCAGGCGAATTTTTGCCTAGTCGATGGCTTATGAATGTT
CTCTCTGCTCTATTTTGCAAGCCAGGGATGAATCATATTTGTAAATCCAC
AATATTTCTCTTATGTGGATACGATCACGCCCAAACCAATTCATCTCTCC
TCCCAACCATCATACAGCACACTCCTGCAGGAACCTCAACATATACCGTC
GTTCAGTACGCCCAAGAGTTCAATACCGGGGATTTTAAAGCAATGGATTG
GGGAAAAAAACAAAATATAAAGTATCATGGGTCTGAGGTCCCTCCACGAT
ATCAAATTGAAGCAGTTGACGTTCCTGTTGCTGTTTATCGTGGGAAAAAT
GATTGGCTGGSACAAGAAGAAGKAAGATTTGAGCAGTAATATTTATAAAT
TGATAACTTTAGTGACACTTTTTTTAAGGATGTGATACACGTGGTTAATC
GCTTACCTCAACTATATGATGACTATATCGTACCATATGATGATTGGAAT
CATGTTGATTTCTTATGGGCCATAGATGCAGATCGATTTTTGTACAAAAA
GCTCATTGATAATATGAAGAGATACGAAAATAAAGACATTTTAAAGAAA back to top
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