EMLSAT00000000496, EMLSAT00000000496-696343 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000496
Unique NameEMLSAT00000000496-696343
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1078supercontigLSalAtl2s1078:162753..165695 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000496 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000496EMLSAG00000000496-683262Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002164EMLSAE00000002164-711092Lepeophtheirus salmonisexon
EMLSAE00000002165EMLSAE00000002165-711093Lepeophtheirus salmonisexon
EMLSAE00000002166EMLSAE00000002166-711094Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773626auto773626Lepeophtheirus salmonispolypeptide
EMLSAP00000000496EMLSAP00000000496Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000496

>EMLSAP00000000496 ID=EMLSAP00000000496|Name=EMLSAP00000000496|organism=Lepeophtheirus salmonis|type=polypeptide|length=521bp
MFFYRPWVRTPSDDVIFNKQINNLGIYNFYRRSWGYGVLLGLTMIGSLIL
NSSFLMSFWTWPNQRKHAPSIVLLMFTIRDLFVTIFLIPTAIAWLVFGEG
KWISGSEWCTISGFLDFFLAAEYPFLILCLCIVLITRKLTKYYDDFFDPA
LDEEDDHRKVDEYIQSIPTLSVPGVTVVGVGSPNGSRAPSVINQPIHGKY
ASSPPSIAYSDTSRGKRRLTPGGGFHHSNKAASISGGSVQRGANYLKPPL
HNFRASSPLKEEIASVDLWEEASLGYPGRQCPSIRTREMVDMDDEDELGP
PTFHQWHYFLTGTTWIIALSFGISAAFYMKYFQNKRTXTCMLFANPFSNP
NVMMDPGFNYLFSNVILTYLVPMGVFLILLVFMYLQRTKNSKFQRYIKLT
LAIFLVFVISRTPMDKLQLEGLIEAYNGTKLLTILPYEIEHEILVIWAMF
IPTLLHPIIFLGFISEYREGASIGWKIIVGCYHVKKQPKRANMMNQMDRI
EEEEPVKNDNDESMTKESEFL
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mRNA from alignment at LSalAtl2s1078:162753..165695+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000496-696343 ID=EMLSAT00000000496-696343|Name=EMLSAT00000000496|organism=Lepeophtheirus salmonis|type=mRNA|length=2943bp|location=Sequence derived from alignment at LSalAtl2s1078:162753..165695+ (Lepeophtheirus salmonis)
TTACGAGTCAATATGAGGACTCTGAGGGACAAATAAATCATTTCTTATTG
CAGTTCATACGAATATTATGCAAATAAATACTTTTTTTTATAATGGTTCA
TTGAAATGTAATGTTAACATCAATGTGTACGTATAGAATAAAACTTCCAG
GCGTTGTTACTCTAGCCAGGTATAACGCTTAGTTCCAGGTATGCAACTTC
ATAACAAATCTATACAACTACTCTTGTTCAATAGACTTGCATCATTTAAG
GACAGTTTAGATTATGTGGAGGACCTCCATGAATGAGACCGAATGTTCCA
CAAGCTAATTCTATCCAGTGGACAACTACTACTATGACTTTTATATGAAT
TCAAAGGAACCCAGAACAAGAATACACACAAAGGTAAGAAGACTAAGTTT
ATTGCACTCAAGTTCAACTATTATTTCACAAATTCAAAAGAAGCTAATTA
ATTTTTGTACAAATTCGGCAAAGACAAAATTGGTAATGTTTTGTACACAT
AGACAATAAGACTTAAAGACCATCTTTTAAAAATTCTTCATAAGGGAGGA
CTGATAAATTAATTATCCATTTGTATTCAACTCAATGGCATTTATATTTA
TACTTACACATTATAGCATATTTCTTATTTGAACAAATGACTATTACAAT
TGGGTAGATAAAACTAGGGGAGGGAGGCTAAGGACTTTTTCCATTGTTGG
AGACATGTATAAACATATTATGGCTGYTAATGTAGCATTTAAAATACATT
TAATTGATAATTGAATGTCTGAAAGAATGTTTCAAAGATATCAATTTTCA
CATCTACAGAAATAAACATAGTATTTTTTTTTTCTTTTGCCAAATCTGTC
AATTGTTTTTTGGTAAATAGTGATGATTTGTTCCTACAAATCGTTATTTT
TATCTTTTTACGATTTGTTATTCGATTAAATAATTAAATCTTTACGTAAT
TAATTCATTTTATGCGTTTGTATGCATTAAAATTTTACATTTCGATTATA
ATAACTTCCGTTGATTGTTCTCTTAGTACATACAATTTGGTATTATTTTT
TTCTTATTTTCTAGAATCAGTCATGTTTTTCTATCGGCCTTGGGTTCGTA
CTCCAAGTGATGATGTAATTTTCAATAAGCAAATAAACAATCTAGGAATT
TACAACTTTTATCGTCGTAGCTGGGGCTATGGAGTTTTACTCGGTCTTAC
GATGATAGGAAGTTTAATTTTAAACTCATCATTCTTGATGAGTTTTTGGA
CATGGCCCAATCAAAGGAAACATGCGCCCTCAATTGTTTTACTCATGTTT
ACCATCCGAGACTTGTTCGTGACGATATTTTTAATTCCAACAGCTATAGC
TTGGTTAGTTTTCGGGGAAGGAAAATGGATATCCGGGAGTGAGTGGTGCA
CGATATCTGGCTTTTTGGATTTTTTCCTGGCTGCAGAATACCCTTTTCTT
ATTTTATGTCTATGCATTGTTTTAATCACGAGGAAACTAACTAAATACTA
CGATGATTTTTTTGATCCTGCACTTGATGAAGAGGATGATCATCGAAAAG
TGGATGAGTATATTCAAAGCATACCAACATTGTCAGTACCTGGAGTGACT
GTGGTTGGAGTTGGTAGTCCAAATGGCTCKCGAGCGCCCTCCGTCATTAA
TCAACCTATTCATGGAAAGTACGCCTCCTCTCCTCCGTCCATTGCATACT
CAGACACTTCGAGAGGGAAAAGGAGATTGACTCCAGGAGGAGGTTTTCAT
CACTCCAATAAAGCAGCTTCTATTTCTGGAGGATCTGTGCAAAGGGGAGC
CAACTATTTAAAGCCCCCATTACATAACTTTAGGGCTAGTTCACCACTTA
AAGAAGAAATTGCTTCGGTAGATTTGTGGGAAGAGGCCTCTTTGGGATAT
CCTGGTCGACAGTGCCCATCGATTAGAACCCGAGAAATGGTAGACATGGA
TGACGAAGATGAACTTGGGCCTCCAACATTTCATCAATGGCATTACTTCC
TAACTGGAACTACATGGATCATAGCCCTGAGCTTTGGGATATCTGCTGCT
TTTTACATGAAGTATTTCCAAAGTAGGTTTGACCCTATAGTTCAATTGGT
ATCCCTCTTTATAACTTATATTTGTAATTTTCAGATAAGCGTACATGNAC
ATGCATGCTATTCGCAAATCCCTTTTCAAACCCTAACGTCATGATGGATC
CTGGGTTTAACTACTTGTTTTCAAATGTCATACTCACTTACCTTGTTCCC
ATGGGAGTATTCCTTATACTTTTGGTCTTTATGTATTTACAAAGGACCAA
AAACTCTAAATTTCAAAGATATATTAAACTCACACTCGCCATATTCCTTG
TATTTGTTATATCAAGAACCCCCATGGACAAATTACAATTAGAAGGTCTC
ATTGAAGCCTATAATGGAACTAAACTATTAACTATCCTTCCTTATGAAAT
AGAACATGAAATCCTGGTTATTTGGGCCATGTTTATCCCAACTCTTCTTC
ATCCAATTATTTTCCTTGGATTCATATCGGAATATCGAGAGGGAGCCAGC
ATTGGATGGAAAATCATTGTGGGTTGCTATCATGTAAAAAAACAACCAAA
GAGAGCTAATATGATGAATCAAATGGATAGAATAGAGGAAGAAGAACCTG
TCAAGAATGATAACGATGAATCTATGACCAAAGAGTCAGAATTTCTCTAA
ATAGGGCACACGTTGTCAACATTGGATCTCTCTCTCTATGTTATTTGAAT
GCTAAAATGCTTCAATATAACTCAATAATTTCAAGTTATTTTTAAAAATA
ATTATATTTTTGCTATACAACATAATAAGTATATTTTATTTTTATTTTGG
TATATATCGTTATATGTATTATGTACTAACAATACCAAAAGTAATTTGTT
GAAACTGCATACATTTAAATTGAAAATAAATTCATATAAGTAC
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