EMLSAT00000000499, EMLSAT00000000499-696346 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000499
Unique NameEMLSAT00000000499-696346
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1078supercontigLSalAtl2s1078:43301..44013 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000499 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000499EMLSAG00000000499-683265Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002179EMLSAE00000002179-711107Lepeophtheirus salmonisexon
EMLSAE00000002180EMLSAE00000002180-711108Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770414auto770414Lepeophtheirus salmonispolypeptide
EMLSAP00000000499EMLSAP00000000499Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000499

>EMLSAP00000000499 ID=EMLSAP00000000499|Name=EMLSAP00000000499|organism=Lepeophtheirus salmonis|type=polypeptide|length=104bp
MDLLPNHRIVTMAAEVVGAPYEVKYVDIAAGVHKTPEFLERVPVMKYKGF
VINESRAIAGYLAPEFDKTGKLYPTCPMDNARVNQQLFFDMGVFFDAFRD
CVIS
back to top

mRNA from alignment at LSalAtl2s1078:43301..44013-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000499-696346 ID=EMLSAT00000000499-696346|Name=EMLSAT00000000499|organism=Lepeophtheirus salmonis|type=mRNA|length=713bp|location=Sequence derived from alignment at LSalAtl2s1078:43301..44013- (Lepeophtheirus salmonis)
ATGGATTTATTACCTAATCATAGGATCGTTACAATGGCTGCTGAAGTTGT
TGGAGCTCCTTATGAGGTTAAATATGTTGATATTGCAGCTGGAGTACACA
AGACACCTGAATTTCTTGAAGTAAGTATTGCATTCAGGATTGATCCCTTG
GCATTCACTTACATAATAGGTAAAAAATCGTTGAGGCAACATTATTGGTT
GTTTTGGCAAGAAGATTTACGTGTGCTGAGATGCTTTCATTTTAATATAG
TTTTCTGCCGTCTGTTATTAGTAAACATAATAATCTATTTTTTGCTACAA
ATGAACTATATTAATCAAAATATAAATTAATGTTGGTTATTCAAAATCAT
CTGTTCTTTGGCAATTTTGATATCTTAACCCTTTCTCTCTAAAACTAAAT
GCACCATAATTTCGTGTAATGAAGGGATCTATCTGTTTATATGTTATGTA
TTAGGAAAAATGATGTTGAACTTTTATCTAGTATATTAATTATTTATAGA
TTAATTAATCCTCAACAGAGAGTCCCAGTTATGAAGTATAAGGGTTTTGT
AATAAACGAGAGTAGAGCTATTGCTGGATACTTAGCCCCAGAGTTTGATA
AAACTGGCAAACTTTACCCAACTTGTCCCATGGACAATGCTCGAGTAAAT
CAACAATTATTCTTTGATATGGGAGTTTTTTTCGACGCTTTTAGAGATTG
TGTGATAAGTTAA
back to top
Add to Basket