EMLSAT00000000514, EMLSAT00000000514-696361 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000514
Unique NameEMLSAT00000000514-696361
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1080supercontigLSalAtl2s1080:22915..23969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000514 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000514EMLSAG00000000514-683280Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002237EMLSAE00000002237-711165Lepeophtheirus salmonisexon
EMLSAE00000002238EMLSAE00000002238-711166Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769579auto769579Lepeophtheirus salmonispolypeptide
EMLSAP00000000514EMLSAP00000000514Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000514

>EMLSAP00000000514 ID=EMLSAP00000000514|Name=EMLSAP00000000514|organism=Lepeophtheirus salmonis|type=polypeptide|length=316bp
MQRIRNVHSGLSSRIISAKQFPARTKDKIGSAALMTWDLCYNCFTIAISM
IVLSVISFMIYGAFYYGYIPAPLIKSPMTMTFKPCHSSPSKCSVVSSSYN
LSEILMNDQPYFISVRLKLPDSPVNRDHGMFMSCLKVFGKNGSMLREHCK
SSLFPHRSFITRQLRNLIISPGSEKQRVIAGYWNEYETIEIDFFKEFMDM
DPYNPAKWITFVIKSRFLDVYSAELRILADFKGIRAFMYYYPITAAILGS
VFYLSVLISVLVISWLHLHGENYIKKGFEDSVDDMDDTSEDSMDSEKPEI
EDLYNSNLDFSRKNWF
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mRNA from alignment at LSalAtl2s1080:22915..23969-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000514-696361 ID=EMLSAT00000000514-696361|Name=EMLSAT00000000514|organism=Lepeophtheirus salmonis|type=mRNA|length=1055bp|location=Sequence derived from alignment at LSalAtl2s1080:22915..23969- (Lepeophtheirus salmonis)
ATATGCATTTCCGTGATGCAACGTATACGTAATGTACACTCTGGCCTGTC
CTCAAGGATTATTTCAGCAAAGCAGTTTCCTGCTAGAACTAAGGACAAAA
TTGGATCTGCTGCTTTGATGACATGGGACCTCTGCTATAACTGCTTCACA
ATTGCTATTTCAATGATTGTACTTAGTGTCATTTCCTTTATGATCTATGG
AGCATTTTATTACGGATATATCCCTGCTCCTTTGATTAAGTCTCCCATGA
CCATGACTTTTAAGCCCTGTCATTCATCTCCTAGTAAATGTAGTGTAGTA
TCTTCGAGTTATAACTTATCTGAAATTCTCATGAATGATCAACCCTATTT
TATATCTGTACGACTTAAATTACCCGACTCTCCAGTCAACAGGGACCATG
GTATGTTTATGAGTTGCCTAAAAGTTTTTGGTAAAAATGGATCCATGCTC
AGGGAACACTGTAAATCATCTCTTTTCCCTCATCGCTCCTTCATTACAAG
GCAATTAAGAAACTTAATTATTAGTCCAGGTAGTGAAAAACAAAGTATGT
TTGAAAAAGTTGTATGTTTAATTTTAACATTATAATTGATGGCTATTCTA
ACTATGAGAATTTGTAACATTATTATCTTATAGGGGTCATTGCTGGATAT
TGGAATGAGTATGAAACGATAGAAATCGATTTCTTCAAAGAATTTATGGA
TATGGATCCCTATAATCCAGCAAAATGGATCACATTTGTTATTAAGTCTC
GCTTCCTTGATGTATACAGTGCTGAACTAAGAATATTGGCGGATTTCAAG
GGTATTAGGGCATTTATGTACTATTATCCCATAACTGCGGCCATTTTGGG
CTCTGTTTTTTACTTATCAGTATTAATCTCTGTTTTGGTAATATCTTGGT
TACACCTACATGGAGAAAATTACATTAAAAAAGGATTCGAAGATAGTGTA
GATGATATGGATGATACTTCTGAGGATTCAATGGATTCGGAAAAGCCTGA
AATAGAGGATTTGTATAATAGTAATTTAGATTTTAGTCGGAAAAATTGGT
TTTAA
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