EMLSAT00000000519, EMLSAT00000000519-696366 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000519
Unique NameEMLSAT00000000519-696366
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:113933..115049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000519 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000519EMLSAG00000000519-683285Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002254EMLSAE00000002254-711182Lepeophtheirus salmonisexon
EMLSAE00000002255EMLSAE00000002255-711183Lepeophtheirus salmonisexon
EMLSAE00000002256EMLSAE00000002256-711184Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772488auto772488Lepeophtheirus salmonispolypeptide
EMLSAP00000000519EMLSAP00000000519Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000519

>EMLSAP00000000519 ID=EMLSAP00000000519|Name=EMLSAP00000000519|organism=Lepeophtheirus salmonis|type=polypeptide|length=291bp
MSCSFGMVPLRSVEEYFGSMSXTSKRLXEDVSGXKSSYDSVWKELEDKEK
EQILDESIVPPEVSLQYETPSPSQHTVFPRYKVKAGQKTVRVEVEGENNE
TSSYSYLDEHSAPFHWKTRSQQELRFESGRPLSLSSTELTENGLEKITSP
PSKILAQRPRNTTKGNPSFAKPVGIPIVPSSPSSSRLSSSPESVKSSQPL
LKNTSTDSLGPSPSNSGIVHRIVKPRIAPPPPPPSSSQKRPVSAPPKEED
KKVLLDEXSSPLDENFKNFSINLSTDSIEIPKTGFDFLDNW
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mRNA from alignment at LSalAtl2s1081:113933..115049-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000519-696366 ID=EMLSAT00000000519-696366|Name=EMLSAT00000000519|organism=Lepeophtheirus salmonis|type=mRNA|length=1117bp|location=Sequence derived from alignment at LSalAtl2s1081:113933..115049- (Lepeophtheirus salmonis)
ATGAGTTGTTCCTTCGGAATGGTTCCACTTCGGAGCGTGGAAGAGTATTT
CGGGTCTATGAGCMCGACAAGTAAGCGGTTGAMGGAGGATGTGTCGGGCG
MGAAGAGCAGCTACGACTCTGTTTGGAAGGAGCTGGAAGACAAGGAAAAG
GAGCAAATTTTGGATGAGAGCATCGTTCCCCCAGAAGTGTCCCTCCAGTA
CGAGACGCCTTCCCCTTCACAACACACTGTTTTCCCCAGATACAAAGTCA
AAGCGGGGCAAAAGACGGTGCGTGTTGAAGTGGAAGGAGAGAACAACGAG
ACCGTAAGGATGGATCACATCTCATKCCATCCCATACGACTTATCCTCTT
TTCTTTTTCCAGAGCAGCTACAGCTACCTTGACGAACACTCCGCACCCTT
TCATTGGAAGACGCGGAGTCAGCAGGAGCTTCGTTTCGAGTCTGGGAGAC
CTCTTTCACTTTCCTCAACGGAACTAACAGAAAACGGTCTTGAGAAAATC
ACGTCACCCCCATCCAAAATTCTTGCCCAAAGGCCACGCAATACCACAAA
GGGGAATCCCTCCTTTGCCAAGCCTGTCGGGATCCCTATTGTTCCATCTT
CACCCTCCTCATCACGCCTCTCATCCTCTCCAGAATCGGTTAAATCCTCA
CAACCCCTTCTTAAGAATACGAGTACGGATTCACTTGGKCCCTCCCCATC
AAATAGTGGCATTGTGCATCGTATAGTTAAGCCACGAATAGCRCCCCCTC
CACCACCACCCTCATCATCTCAAAAGAGACCTGTAAGTGCTCCACCCAAG
GAAGAAGATAAGAAAGTCCTTCTTGATGAGRTATCCAGTCCATTGGATGA
AAATTTTAAGAACTTTTCCATTAACTTATCCACAGATTCTATTGTGAGTA
TATTATATTATTCATATACCTTTCCTCCCCCCCCCCCCCCTCCCCCAAAT
TTAATTAAAAAGGATTTTCGCCCCTGGTTGGGCTAAAAAGTGAGCCTCGA
TTCATGTAAATATTTGTGTATTTCAAGCAAATATATGTATATAACCTTAT
TTTTATTGTATCTTTTTTTTTACAGGAAATTCCAAAAACAGGTTTTGATT
TTTTGGACAATTGGTAA
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