EMLSAT00000000522, EMLSAT00000000522-696369 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000522
Unique NameEMLSAT00000000522-696369
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:162441..162992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000522 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000522EMLSAG00000000522-683288Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002261EMLSAE00000002261-711189Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773605auto773605Lepeophtheirus salmonispolypeptide
EMLSAP00000000522EMLSAP00000000522Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000522

>EMLSAP00000000522 ID=EMLSAP00000000522|Name=EMLSAP00000000522|organism=Lepeophtheirus salmonis|type=polypeptide|length=183bp
MDAIRHARKHLATEDQEQLSTVQRAMALLVFPTDTIISPYCEMLKDFRWN
DLIQQFRTENYRLYQLSNQSVFTVALQVGLSALKTPMCYRSVKERNTECP
VCEPCLNNLAKNLPNAHCSHSRLICHITGTPLNEHNPPLMLPNGYVYGEQ
ALVKMADENDGQVICPRTKEIYPFRDCEKVYVM
back to top

mRNA from alignment at LSalAtl2s1081:162441..162992+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000522-696369 ID=EMLSAT00000000522-696369|Name=EMLSAT00000000522|organism=Lepeophtheirus salmonis|type=mRNA|length=552bp|location=Sequence derived from alignment at LSalAtl2s1081:162441..162992+ (Lepeophtheirus salmonis)
ATGGATGCTATCAGACATGCTCGTAAGCATTTAGCCACAGAGGATCAAGA
ACAATTGAGCACAGTACAAAGAGCAATGGCTCTTCTTGTCTTTCCAACAG
ATACCATCATCAGTCCTTACTGTGAGATGTTAAAAGACTTCCGTTGGAAT
GATTTGATTCAACAGTTTCGGACAGAAAATTATAGATTGTATCAATTGTC
CAATCAGTCCGTTTTTACAGTGGCACTTCAAGTTGGACTATCTGCTCTCA
AGACACCTATGTGCTATCGTTCTGTGAAGGAAAGGAATACAGAGTGTCCC
GTCTGTGAACCTTGTTTGAATAATTTGGCGAAAAATCTTCCCAATGCACA
TTGTTCACATTCAAGGCTCATTTGTCATATTACTGGTACTCCTCTCAATG
AACACAACCCTCCACTAATGCTTCCTAATGGCTATGTATATGGGGAACAA
GCTCTAGTAAAAATGGCTGATGAGAATGATGGTCAGGTCATTTGTCCTAG
AACAAAAGAAATTTATCCTTTCAGAGATTGCGAAAAAGTTTATGTTATGT
AA
back to top
Add to Basket