EMLSAT00000000528, EMLSAT00000000528-696375 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000528
Unique NameEMLSAT00000000528-696375
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:97364..102531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000528 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000528EMLSAG00000000528-683294Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002289EMLSAE00000002289-711217Lepeophtheirus salmonisexon
EMLSAE00000002290EMLSAE00000002290-711218Lepeophtheirus salmonisexon
EMLSAE00000002291EMLSAE00000002291-711219Lepeophtheirus salmonisexon
EMLSAE00000002292EMLSAE00000002292-711220Lepeophtheirus salmonisexon
EMLSAE00000002293EMLSAE00000002293-711221Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772051auto772051Lepeophtheirus salmonispolypeptide
EMLSAP00000000528EMLSAP00000000528Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000528

>EMLSAP00000000528 ID=EMLSAP00000000528|Name=EMLSAP00000000528|organism=Lepeophtheirus salmonis|type=polypeptide|length=313bp
MVQKVYTVLFDYRLDIIPTDKDIQEHVVSPLQKVLNVVLTTEKKVEDPAA
TVAYQFIGGGFFVLLRIYDKDSSDEQVLMTLMIESKKPIDLNENGLELGN
LKSNLSCRMGLTLKDVHLVGSFNRCQKESPYLRSSDSRVQESGDGALLKE
IFSQPHKPAMVTMLEIDEMVMDXVNTHMPSVSGPYLKKDFREGPNHKIIV
GDAIEFMENELAKGAQYDIIFGDLTDVPISTSDNDVDTWNFIKTIVGLAI
PLLKAETGYYLTHCNGANVPEVLQAYEKFIKSIHNGKCTFTSSQAFVDSF
LEIWVYYQVQRHV
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mRNA from alignment at LSalAtl2s1081:97364..102531+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000528-696375 ID=EMLSAT00000000528-696375|Name=EMLSAT00000000528|organism=Lepeophtheirus salmonis|type=mRNA|length=5168bp|location=Sequence derived from alignment at LSalAtl2s1081:97364..102531+ (Lepeophtheirus salmonis)
TTGTAATATAACTCTTAAGACTACATATGGCTATATGAATTGAAACCTGT
TTCTCCATCGGCTTAAATTATAAATAATTTTTTTTAGAAAGAACATTTTT
CATTCAGATTTGAATCGTTCTTCGTTGATCAAGAAACTTGGAATTAAAAA
AATAGTAGCCATGGTTCAAAAAGTGTATACCGTTCTTTTTGACTATCGAT
TGGATATTATTCCAACGGATAAAGATATCCAAGAACACGTAGTCTCACCT
CTACAAAAAGTATTAAATGTTGTTCTTACGACTGAAAAGAAGGTCGAAGA
TCCAGCAGCAACGGTTGCTTATCAATTTATTGGTGGTGGATTTTTCGTAC
TTCTTCGTATTTATGATAAGGATAGCTCTGATGAACAGGTTTTGATGACT
CTCATGATTGAATCCAAGAAGTGAGTTTTCCTTTTATAATTATTATGAAT
GATCATTAATACTATATGTCTCTATTTTTTTATTATTATTATTATTAAGG
CCTATTGATTTGAATGAAAATGGATTGGAATTAGGGAACTTGAAATCAAA
TTTGTCTTGTCGCATGGGATTAACGTTGAAGGATGTACATTTAGTAGGTT
CATTCAATAGATGTCAAAAAGAATCTCCTTATCTAAGATCATCAGGTAAT
TATTTCTATTTAATTTGAATAATTAATGGAGTCAATATTGGAGTTAATTT
ATTATAATTATTTATTATATATTATTAGCCTAATTAGAGAATTTATATTT
TATCTTACATTTGTGACCAGGATGATATATAATATATATACGACACTACA
TGTTTAATTAATTAATTGTTTTTTTACTTAAATGCCAACATGAATGAAAT
TAACAAAAGCAAAGAGGAGAAAATCAAGGAGCTTCCTCCACTAAACAAAT
CATGATTATACTCTCCTTCGGCTTCTGAGTCAACTACATTTAGGTAATCA
TTATCATCATCAAATTCATCCTCAAGGTCTGTCTCTCCTTCTTCACTATC
CTTAAAGACGGGGCAGCTCTTAACATTGAGATCTCTATTTACGGACTGTA
TAACATCACCCAAGCTAGTTACGTAGGCGTCCATTATATTTTTCACGGTT
TTTTCGTCTGTGCACTCAATGAGGCTCATTTTCTCTTCTTCACAAGTAGA
AAACATACCTTCAAATTCTTTGCAAAGAGAATTCAAAAATTCATATTCAC
TTATTTTGTCTAGTATAGTGTTTTTTGCAGAATCTAAGCAGTTTTTGAAG
GATACTTTATATTCAGCCAATGTGTCTTCATCACAATTTGTTAATTTTGT
CTCTTCAGAGGACACTTGAGCCAGGAGTGAGAGTGAAACCAATAAAAAGA
GTTGAATATTAGATTTAAAAAACACCATTTTGATCACACAAAAAACGTTG
AATTAAAGTCAAGTTCTTTCTTTACAAATACTATTAGCAAATGTTGCTTA
GGTAGTACTAAATAGTAGTAGCAGGCTGTAGGATGGTAAGGTGACTGAGT
GATAACCTATTTCTTTTTGGTTTATACCTGGCCGAACAGTCGTTGTCTTC
TTAAGGTTGCTGGAGAAATGACTCGTTTTTTACGGTTTTTTTTTTTTAAA
TTACTAACATGTACCTACTTTAATTCCCCCATGTAAAGAGGTTACACCCT
TCTTCATTTTCATGTTATAACATGATAAATGATTGGCTTTGAACAACACA
TCTGCACTAGTGCGGGAGGCATGTTGTGAGTGGATTAATTTGCAAGCAAA
TTACATTACCGAATATCTTCATAAATATGCTTGATCTCTTCATTAGGAGG
TTTGTAACCTCTTGATAAGTAGATGGGAAATACATCGGGTTAAATTATAA
TTTCAATGTTAAAGTGAATAGTTAATTGATTATTATCAACAAAGTCAAAC
ATACATTATCACTACTTCATATACACTACAAAATATATATTTATTTTTTA
CAAATAATCGAATGATGAATCATTTTTATTAAAATGTATCACTAAATTTG
TATATAATTATGACTTAATATAATTTATAAATATACTATATAGTTTGTTT
TTCTTTCATTCATTTATAGATTCTCGAGTTCAGGAGTATAGATACAAAGA
AATCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTCTTGGTATTTATAGTTAAATATAATTGAACCCCA
TTGATTGTTTTACATTATTAGGAGTGGAGATGGAGCTTTACTAAAAGAGA
TATTTTCTCAGCCTCATAAGCCTGCTATGGTAACGATGCTTGAAATTGAT
GAAATGGTTATGGATGSTGTAAATACACATATGCCATCTGTTAGTGGACC
TTATCTCAAAAAAGACTTTAGAGAAGGCCCTAATCATAAGATCATTGTTG
GGGATGCAATTGAATTTATGGAAAATGAATTAGTAAGTTGACATGTCTTA
TCCTCTAATACAGTATTTTTCATACTTTAAGGCCAAGTGAATTTCAAGGT
ACGCCGAAAAATTTATGTTTCTATTTTTCAAAAAAGAAAATAGAACCAAA
AATTTGTTAAATAGCGTGTCTATGGTTTTGATAATTATCTCATTTATGTG
CCCTGGTGTAAAAAGTTTGAGAAACACGGTTTTAATCAATGATCAAATAA
TTAATTAATTAAAATGAATAGGCTAAAGGAGCACAGTATGATATCATTTT
TGGAGATCTTACGGATGTACCCATTTCAACAAGTGACAATGATGTAGATA
CTTGGAACTTCATCAAAACCATTGTTGGCCTGGCAATACCTTTATTAAAA
GCCGAAACGGGATACTACCTTACGCATTGCAATGGTGCCAATGTACCTGA
AGTACTTCAAGCATACGAAAAGTTTATAAAATCCATTCATAATGGAAAAT
GTACATTTACATCATCTCAAGCATTTGTCGACTCATTTTTGGAGATTTGG
GTTTATTATCAAGTTCAACGACATGTATAAAAATGATTACTAAATAAAAC
GATCAAAACTGAAGCATATCTCTAGACTTTTTTATTTATTTTTGATTTAA
TTATTTCAATATCCTGAACAAAGTGATTTTTAATCAATTTGAAAGGATTC
GTAGGCTCTGAAGATATACGCGGAATTTTGACTAATCTTCTTACTTGAGG
TTGCATTAAAATAAGATTGACTAACAGCCCAGACGCACCAGAAACTGACC
AGTACAGAGTCAGTCCACTTGGTGTATAGCAGCAAAGAGGTACGAGAATA
AAAGGTAGTATCCTCCCAACCATTCTTGCAGATCGAATGGGTAATGGMAA
TTTTTGACCTTCGGGGGATCGATGTAGTCTGGAGGAACATTCTTGATTGA
TTATAAGCGTCGATCCAATTAGAATCGGCAACACAAAAATGGGATCAGGA
ATACCTAAATTTGAAAACCAAAGACATCCTTCGGTTTTAAATTCCACAAA
ACGGAGCTGAAACATTTTTATTTATTAAGCACTCTCCTCACCAACATAAA
ATGAAGAAAAAAAAGAATTACCAGAGATTCCTTTGTGTAAGAGGTTATCG
TCATTTGATTCCGAAGAGCCATTGTCATAGTCATCCAGATAGGGATTTGT
AGAAAATAGGGGATGAATATTTTTGCTGCTGAACAATTTCTCTCTATTAC
CAATTCCTTGAATGAGTTTCGAATGGCGCTACAAATACAAAATATCAGTA
TACGAGTTATCCTTGCAATATTAAAATACAACTTATAAGTAATCAATTAC
ATCAATAACCCCAGAAGTTCCTATATTTGGTTCCGTGGATATACCGATAT
CTGTTCAAAACTTTACTAAATGATTTTTAAAATGAACAACCACACAATAG
CGAAACCCGGTCTAAAAGGGGAATTTTATTTTTAAAATATAGACACCACT
TAAGCCGGATCTCAAAGGATCGACACAGCTTTTCCACTATTAAAGAAACT
CGCCTTATTGAATGAATTAAATACTCCTATGATGCATCACTCGTTTTGGA
CTCTCATAAATGTCCCTTATAAACAAATATCCGTATTAAGCAGGTTCTAT
TGTATTCCTTTTTGGTATAAAGATATATTGGTTTTAGAATAGGGAATCAT
TTCTTTTCATTTGAGAAGCCATTCTTTGTACAATCAAATTTGCAGAACCG
GAGAATGAAACATATCCCTCTTACGGGATATGGCTTAAAATCTAGTTGTA
ATGGACAACAATGAAAAGAAAATATTATCTATTTGAAATTTAATATAAGG
GGATGGTGGAATGATCCTATTAAGTTGCCTAGAGACTGTTTACGTACAAT
TAATATATCATGGCAATGGAGCAAAAGTTTTAAAAATCACTGTTTGTCAA
AATGACATTTATGGCTAATATCAGTATTCTATTAAAATTAACCTTATTTG
ACAAATATAACTCAGGGAAATACTATATAACTTAATTTTAAAGCCTATAT
AACACAAATGTAACATAGGTAGCAATGAAGATCTTGATTTGGAAAACAAT
TATCACCGACATTAAGTCTTAAGCAATATTATCTTAAATTTTTCTCCAGA
CTCACGATAGAATAAAACTTAAAAGATTGATTCTTCATAACATGTAGGTG
GGATTTTACAAGAGTTTCAAGTTGAAATAAATTGAAGATAAAGTAAAAAA
AATAATATACACATTGAGTTCTCTTCTCATTAACTCAGGATGAATATTGT
TCTTCCTTGCTCGATATGCATATGAGTGTGTCAACTCTGGAACGATCGTT
TCTTCCATTTCTTGCATGATGAGAGCTCTTTTGGCGGCGGMCTGGAAATA
AAACAACAGCAATGAGCTGAAATGAATTAAACAATTACAACTTGTAGTAC
AAATCAGACGTGCATCATTAATAATAATTAATATAATATAACAATGAATC
AATCAAGCGCATCATGAC
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