EMLSAT00000000529, EMLSAT00000000529-696376 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000529
Unique NameEMLSAT00000000529-696376
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1082supercontigLSalAtl2s1082:34274..35257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000529 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000529EMLSAG00000000529-683295Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002294EMLSAE00000002294-711222Lepeophtheirus salmonisexon
EMLSAE00000002295EMLSAE00000002295-711223Lepeophtheirus salmonisexon
EMLSAE00000002296EMLSAE00000002296-711224Lepeophtheirus salmonisexon
EMLSAE00000002297EMLSAE00000002297-711225Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770037auto770037Lepeophtheirus salmonispolypeptide
EMLSAP00000000529EMLSAP00000000529Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000529

>EMLSAP00000000529 ID=EMLSAP00000000529|Name=EMLSAP00000000529|organism=Lepeophtheirus salmonis|type=polypeptide|length=210bp
MIKMITYLLLLSVSSILIPPYQAEEACRMMIDKHNRAEMMSKNFVFGNNN
LWPDKQVPYVFGTRFTSSEKKMIQEAMDTIQTSSCVEFIARSTQRNFIIL
RNDKRGXYTSALGFNQNRGSTTINLNRRMCMRCDLRRLTPYSNCYNGMXA
TTFGLPYDYKSVMQYSRKAFSKNGRNTMTPTRAFRGPLGNRVGMTSLDIQ
KLNEAYQCNS
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mRNA from alignment at LSalAtl2s1082:34274..35257-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000529-696376 ID=EMLSAT00000000529-696376|Name=EMLSAT00000000529|organism=Lepeophtheirus salmonis|type=mRNA|length=984bp|location=Sequence derived from alignment at LSalAtl2s1082:34274..35257- (Lepeophtheirus salmonis)
ATGATAAAGATGATTACATATCTGCTACTCCTGAGTGTGAGTTCCATCCT
TATTCCTCCTTACCAGGCTGAAGGTTTGAAATATTTTATTAAACTTTAAT
AATTGTTAAGTCTAATCATGTTTTCTTTTATTATCAACAGAGGCATGTAG
AATGATGATTGACAAACATAATAGGGCTGAAATGATGTCCAAAAACTTCG
TGTTTGGTAACAACAATCTTTGGCCAGACAAACAAGTACCTTATGTATTT
GGAACTCGTTTTACATCAAGCGAAAAAAAAATGATTCAAGAAGCAATGGA
TACAATTCAAACAAGTTCATGTGTTGAATTCATAGCTCGAAGTACACAAA
GAAATTTCATTATACTTAGAAATGATAAGAGAGGCTGKTATACCTCTGCA
TTGGGATTTAATCAAAATAGAGGTAGCACTACGATAAATTTAAATAGACG
AATGTGCATGGTTTGTACTTAAATTGTAAGAATATTTCTGACTCGTCTTC
ATTCTTTCATGTTTTCAGACCCCATCCACCATTATTCATGAGCTATTTCA
TGCACTTGGCTTTATGCATGAGCAAAATAGGCCAGATCGAGATGCTTTTA
TTCGTGTGAGTTGGAATAATATTCAACAGAGCACTAATACCTATTATCAA
TTTGCTCGAGCTAGAGCATCTGGAGAAACTATACAGCGTTGTGATCTTAG
AAGACTTACACCCTACAGCAATTGCTATAATGGAATGMCAGCCACAACAT
TTGGCCTTCCTTATGATTATAAATCTGTCATGCAATATTCAAGGAAAGCG
TAAGAAAATGAAAAAATTATATCATTTCAATTATGCCTTGATTTACAACA
CAAATATTAGTTTCTCTAAAAATGGACGAAATACGATGACTCCTACCCGT
GCTTTCCGTGGACCCTTGGGAAATAGAGTTGGAATGACATCATTAGATAT
TCAAAAATTAAACGAAGCATATCAATGCAATAGT
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