EMLSAT00000000530, EMLSAT00000000530-696377 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000530
Unique NameEMLSAT00000000530-696377
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1082supercontigLSalAtl2s1082:19494..19924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000530 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000530EMLSAG00000000530-683296Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002298EMLSAE00000002298-711226Lepeophtheirus salmonisexon
EMLSAE00000002299EMLSAE00000002299-711227Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769415auto769415Lepeophtheirus salmonispolypeptide
EMLSAP00000000530EMLSAP00000000530Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000530

>EMLSAP00000000530 ID=EMLSAP00000000530|Name=EMLSAP00000000530|organism=Lepeophtheirus salmonis|type=polypeptide|length=120bp
MKIKVNFATQLISSSVVHEIKFYNKDLQLPEFRNSERTVEFLRRFDTLFD
FTNSRNLLAKGFKSPRSIGIKDYWKPIFQDMFLYISELKDAFGKPLVKTR
KITDFVGFMASITNGINAIE
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mRNA from alignment at LSalAtl2s1082:19494..19924-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000530-696377 ID=EMLSAT00000000530-696377|Name=EMLSAT00000000530|organism=Lepeophtheirus salmonis|type=mRNA|length=431bp|location=Sequence derived from alignment at LSalAtl2s1082:19494..19924- (Lepeophtheirus salmonis)
ATGAAAATAAAGGTATGTGAAAAATGTTACAATTTTTTAAAAGAAAAAAT
GGTAATTAATTAATTTTTTTACTTCAACAGGTAAACTTCGCTACTCAACT
CATTAGTTCATCTGTAGTACATGAGATAAAGTTCTATAATAAGGATCTTC
AATTACCGGAGTTTAGAAACTCTGAAAGAACAGTCGAGTTTCTTAGAAGA
TTTGATACACTTTTTGATTTCACCAACAGCAGAAATCTATTGGCAAAAGG
ATTCAAATCTCCTCGGAGTATAGGAATTAAAGACTATTGGAAACCAATCT
TTCAAGATATGTTTTTATATATTTCTGAATTGAAGGATGCATTTGGTAAA
CCTTTGGTCAAAACGCGTAAAATAACTGATTTTGTTGGATTCATGGCATC
AATTACCAATGGTATAAATGCCATAGAATAA
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