EMLSAT00000000534, EMLSAT00000000534-696381 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000534
Unique NameEMLSAT00000000534-696381
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1086supercontigLSalAtl2s1086:87045..88218 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000534 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000534EMLSAG00000000534-683300Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002308EMLSAE00000002308-711236Lepeophtheirus salmonisexon
EMLSAE00000002309EMLSAE00000002309-711237Lepeophtheirus salmonisexon
EMLSAE00000002310EMLSAE00000002310-711238Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771794auto771794Lepeophtheirus salmonispolypeptide
EMLSAP00000000534EMLSAP00000000534Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000534

>EMLSAP00000000534 ID=EMLSAP00000000534|Name=EMLSAP00000000534|organism=Lepeophtheirus salmonis|type=polypeptide|length=342bp
MLXSLKVSLVCVIVALSLFTTWSILVIQKFYKFDYLQSYKELSFSNDSQI
PLFVKTIKNHTIFFEANIPKDTSFFLMETSGKSRLTLKELCALESAARLH
PKRKAFFLMTNKTYERSAAVLEIMEKYSNIQLLSIDLTYVFKGTVIENLW
LKNRIQNSAHYNSHMSDILRCWFLYNYGGTYLDTDVIVLKELPLNYSYAG
VENMESFLITGSVIHFTHHHKLLKMILTDISHNFDGVAWINNGPAMFTNN
IIKLCKANTMKTINDAKCHNFKILPPNAFFPVYYPSWQLYFDSGSREEIK
KRLKDSLIAHYWGKLSSKTKIKSGMPIHDLALEKCPLTAKYF
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mRNA from alignment at LSalAtl2s1086:87045..88218-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000534-696381 ID=EMLSAT00000000534-696381|Name=EMLSAT00000000534|organism=Lepeophtheirus salmonis|type=mRNA|length=1174bp|location=Sequence derived from alignment at LSalAtl2s1086:87045..88218- (Lepeophtheirus salmonis)
ATGCTCCYATCATTAAAAGTTAGTTTAGTCTGTGTAATTGTCGCTCTTTC
ATTGTTTACTACGTGGAGCATACTCGTCATTCAAAAAGTAAGTTAATTAT
CTAAAAAAAAAACCTCAGACAATTGCTATTATTGATATAAAACCATATAT
AATTTCATTTGTACAGTTCTACAAATTTGACTATCTCCAATCCTACAAAG
AGCTCTCCTTCTCAAATGATTCTCAAATACCCTTATTTGTTAAAACCATC
AAAAATCACACCATTTTTTTTGAAGCAAATATTCCAAAAGACACAAGTTT
CTTCTTGATGGAGACCTCAGGAAAATCCCGTTTGACATTGAAGGAATTAT
GTGCCCTTGAGAGTGCAGCTAGGCTTCATCCAAAACGAAAGGCCTTTTTT
TTAATGACGAATAAAACTTACGAAAGAAGTGCAGCCGTTCTTGAGATCAT
GGAAAAATATTCAAATATTCAACTCCTTAGTATTGATTTAACATACGTTT
TTAAAGGAACAGTCATAGAGAATCTTTGGCTTAAAAACAGAATTCAAAAT
AGTGCTCACTATAACTCCCACATGAGTGATATTTTACGATGTTGGTTCCT
CTATAATTATGGGGGCACTTATTTGGACACAGATGTTATTGTTCTCAAGG
AATTGCCTCTCAATTATAGTTATGCTGGAGTTGAGAACATGGAATCATTT
TTAATTAGTAAGACAAACGAAATATTTATGGCAAACCCTATTAATATCGC
TATTTCTTTTTTCTTTACTTCAGCGGGGAGTGTCATACATTTCACTCACC
ATCACAAACTCTTAAAAATGATTCTTACTGATATTTCCCACAACTTTGAT
GGAGTCGCATGGATCAATAATGGACCTGCAATGTTTACTAACAACATCAT
CAAACTTTGTAAAGCCAATACCATGAAAACAATCAATGATGCCAAATGCC
ATAATTTTAAAATCCTTCCTCCAAATGCATTTTTTCCAGTTTATTATCCA
TCCTGGCAACTGTATTTTGATAGTGGCTCCAGGGAAGAAATAAAAAAACG
ACTGAAGGATAGTTTAATAGCACACTATTGGGGAAAATTATCATCAAAAA
CAAAAATTAAGTCAGGAATGCCGATTCATGACTTGGCTCTTGAAAAGTGC
CCCCTTACAGCAAAATACTTTTAA
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