EMLSAT00000000535, EMLSAT00000000535-696382 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000535
Unique NameEMLSAT00000000535-696382
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1087supercontigLSalAtl2s1087:26737..29097 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000535 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000535EMLSAG00000000535-683301Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002311EMLSAE00000002311-711239Lepeophtheirus salmonisexon
EMLSAE00000002312EMLSAE00000002312-711240Lepeophtheirus salmonisexon
EMLSAE00000002313EMLSAE00000002313-711241Lepeophtheirus salmonisexon
EMLSAE00000002314EMLSAE00000002314-711242Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769746auto769746Lepeophtheirus salmonispolypeptide
EMLSAP00000000535EMLSAP00000000535Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000535

>EMLSAP00000000535 ID=EMLSAP00000000535|Name=EMLSAP00000000535|organism=Lepeophtheirus salmonis|type=polypeptide|length=339bp
MKQAFSVILVSLLVLGSTLGAPQSYGAPKCTTQKPTCKNVPKQECQNVPK
QVPKQQCQKVPKQECRNVPKKECKNXPKQXPRQACEKVPKKECKQIPRQV
PKQIPEQKCQNIPKQVPKQECQKVPKQECKNIPKQVPRQECKKVPKQECQ
QVPTRIPKRVPKESCRQIPRQIPKQVPKQECKNVPKEKCEKIPKQVXKKE
CKNVAKQVPKQECRNVPKQECKNVPKQVPKQECRSVPKEECKKVPRQACQ
QVPKQECRNVPRQECQKVPRQACQNVPKQECKNVPKQSCKRVPRQKCQKV
PRQKCQQVPVQACQQVPQQECKNXPKQACETFYACEKTN
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mRNA from alignment at LSalAtl2s1087:26737..29097+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000535-696382 ID=EMLSAT00000000535-696382|Name=EMLSAT00000000535|organism=Lepeophtheirus salmonis|type=mRNA|length=2361bp|location=Sequence derived from alignment at LSalAtl2s1087:26737..29097+ (Lepeophtheirus salmonis)
CGTAACTGACGCAAAAAGGGTATGGAGCACAATATTCGGAGGAGTTGGTT
CGTTTAAAAAACACTATAAAAGGACAAGACTGTTTCAAAAAAGTAGATCA
TAATTTACTTAGAGTTTGATCAAGTAAAGTATAATGAAACAAGCATTCTC
AGTGGTAAGTGTTTGTTCAAATGAGGGTTAATTTTAGGAAAGAGGGATGA
GGAAGGGGCGCAATAGAAGAGAGATTAGTATAATCCTTTATTCTTTTTCT
ATCCTAGATTTTGGTATCTTTACTGGTCCTGGGTTCCACCTTAGGAGCTC
CTCAATCCTATGGAGCACCCAAATGTACCACGCAAAAAGTAAAGGAGCCC
ATTTCATACAAGTGCCAACAAGATCAAGAATGTGCCACCACGTATGAGCA
AGAATGCCAACAGGTCTACAAGGAGCAATGCAAAAACGAATACCAGGAGC
AATGTGAGACCGAATATGAGGATAAATGTTCCACTGAATACGAAGATCAG
TGTAAGACTGAGTACGAGCAGCAATGTCAAACAAAGTACGAGCAGCAATG
CCAAACCGAGTACGAAGATCAGTGTCAGACCAAATACGAATCCAAATGCG
AAACTGCTTACGAACAAAAATGTAAGACAGAGTATGATAATCAATGTGAA
ACCAAGTACGAGGAGCAATGTCAAACCGTCTACGCCACGGAATACGAGCA
GCAATGTGAAACCAAGTACGAACAAGTCTGTGAGACAAAATACGAGACTC
AATACGAGGAACAATGCCAGACCAAGTATGAGACTCAATATGAGGATCAA
TGTCAAACCACCTATGAAAAGGAATGTCAAACCACCTACGAGACTCAATA
TGAGACTCAATACGAAACCAAGTGCGAGACCCAATATGAAACTCAGTACG
AGACCCAATACAAGGAGGAATGTCAAACCAAGTACGAGGACCAATGTGAG
ACGAAGTACGAGACGACTTACGAACAAGAATGTGAGACCAAGTATGAGGA
ACAATGTCAAACCGTCTATGCCACTGAGTATGAACAACAATGTAAAACAG
AGTACAAGACCATCTATGAAACCATTCAAGAAGAGAAGTGTGAGACCAAG
TACGAGGATCAATGTCAAACCGTCTATGAAACTCAATATGAGGAACAATG
TCAAACCAAGTATGAAAAGGAATGTCAAACCCGCTATGAGGACCAATGTC
AAACCGTCTATGCAACTGAGTACGAAAAACAGTGTCAAACCAAGTATGAA
CAAGTTTGCGAACAACCTAGCTACAAACCCACTTATGGAAGTTATGGTGC
TCCAGCAAAGCCAACGTGTAAGAATGTTCCAAAACAAGAATGCCAAAACG
TGCCCAAGCAAGTACCCAAGCAACAATGTCAAAAGGTCCCCAAACAAGAA
TGTAGGAACGTTCCTAAAAAAGAATGCAAGAACGRCCCCAAACAAGRCCC
CAGACAAGCCTGCGAAAAGGTACCTAAAAAGGAATGCAAGCAAATCCCAA
GACAAGTTCCCAAGCAAATCCCAGAACAAAAATGCCAGAATATCCCCAAG
CAAGTCCCAAAACAAGAATGCCAGAAGGTCCCCAAACAAGAATGCAAGAA
TATTCCCAAGCAAGTCCCCAGACAAGAATGCAAAAAGGTTCCCAAGCAAG
AATGCCAACAAGTTCCCACTCGAATTCCCAAGAGAGTACCCAAGGAAAGT
TGTCGGCAAATCCCACGTCAAATCCCCAAGCAAGTCCCCAAACAAGAATG
CAAGAACGTTCCCAAGGAAAAATGCGAAAAGATCCCCAAGCAAGTCCRCA
AGAAAGAGTGCAAAAATGTTGCCAAGCAAGTCCCAAAACAAGAGTGCAGG
AATGTTCCCAAGCAAGAATGCAAGAACGTTCCCAAACAAGTCCCAAAGCA
AGAATGTAGAAGTGTCCCTAAGGAAGAATGTAAAAAGGTCCCACGTCAAG
CATGTCAACAAGTTCCCAAGCAAGAGTGCCGCAATGTCCCTCGTCAAGAA
TGCCAAAAGGTCCCTCGTCAAGCCTGTCAAAACGTTCCCAAACAAGAGTG
CAAGAACGTTCCCAAGCAATCCTGCAAACGCGTTCCTCGCCAAAAATGTC
AAAAGGTTCCTCGTCAAAAATGTCAACAAGTCCCCGTTCAAGCCTGCCAA
CAAGTTCCTCAACAAGAGTGCAAAAATGRCCCCAAACAAGCCTGCGAAAC
ATTCTACGCCTGTGAAGTTTGTGAACAACCCACCTAMGGTTAATKCGRCT
GCCAACATTGAGTCGGAAATTATCCTCTCTCTCAAAATTAGCAAACCCTT
AAACCCTATGAATCAGTCTGAAGATTTATTTATTTATTTTGCTTTTCAGA
AAACAAATTGA
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