EMLSAT00000000538, EMLSAT00000000538-696385 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000538
Unique NameEMLSAT00000000538-696385
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1088supercontigLSalAtl2s1088:2159..2548 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000538 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000538EMLSAG00000000538-683304Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002322EMLSAE00000002322-711250Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768276auto768276Lepeophtheirus salmonispolypeptide
EMLSAP00000000538EMLSAP00000000538Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000538

>EMLSAP00000000538 ID=EMLSAP00000000538|Name=EMLSAP00000000538|organism=Lepeophtheirus salmonis|type=polypeptide|length=129bp
MIFFLVLYTSFLTASFGEDQEGRSKLPYPYQHEQSLKPYSYQYGIKDDYS
GVKLRAEESSDAKVVKGSYEVALPDSRIQKVTYTVDGDSGFVANVKYEGV
AIYPNHVSIYDQTTPTPVYIPIKKTILNS
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mRNA from alignment at LSalAtl2s1088:2159..2548-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000538-696385 ID=EMLSAT00000000538-696385|Name=EMLSAT00000000538|organism=Lepeophtheirus salmonis|type=mRNA|length=390bp|location=Sequence derived from alignment at LSalAtl2s1088:2159..2548- (Lepeophtheirus salmonis)
ATGATATTTTTTCTCGTCCTTTACACATCGTTTCTGACAGCTTCTTTTGG
GGAGGATCAAGAAGGCCGATCCAAACTACCCTATCCATATCAACATGAGC
AATCCCTCAAGCCTTATTCATACCAATATGGGATCAAAGATGACTATTCT
GGTGTAAAACTCCGTGCAGAAGAGTCCTCTGATGCAAAAGTGGTCAAAGG
ATCATATGAGGTGGCTCTTCCCGATTCAAGGATTCAAAAAGTAACTTATA
CAGTGGATGGMGATAGTGGATTTGTTGCCAATGTGAAATACGAAGGTGTT
GCCATTTATCCTAATCATGTTTCAATCTATGATCAAACAACACCTACTCC
AGTCTATATTCCAATCAAAAAAACAATTCTCAATTCATAA
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