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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1088 | supercontig | LSalAtl2s1088:46689..50891 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000539 >EMLSAP00000000539 ID=EMLSAP00000000539|Name=EMLSAP00000000539|organism=Lepeophtheirus salmonis|type=polypeptide|length=475bp
ATYNYCLCKREGEREKEEEREGEREGKREREGEEVSTEPHLHEHGQIHTP
FIMVLSAIYILDMKGKVLINRNYRGDIENNVIEKFIGQTTIAEDEGSSAP
LISTSDGVTFAYIKRNNLYVVATTRKNSNIAMIFVLLHKICSVMEDYFKD
VEEESIRDNFVIIYELLDELVDFGYPQTTDGKILQEYITQEGHKLEVVVR
PPPAVTNAVSWRPEGLKYTKNEVFLDVIESVNLLAGASGNVLRSEIVGAI
KMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFD
NDRTISFIPPDGEFELMSYRLTTHVKPLIWIESVIERHAHSRVEYMVKAK
SQFKRRSTANNVEIVIPVPNDADSPKFKTTSGHCKYVPEQSSIIWTIKSF
PGGKEYLMRAHFGLPSVESELTEGKPPIHVKFEIPYFTTSGIQVRYLKII
EKSGYQALPWVRYITQNGDYQLRTN back to topmRNA from alignment at LSalAtl2s1088:46689..50891+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000539-696386 ID=EMLSAT00000000539-696386|Name=EMLSAT00000000539|organism=Lepeophtheirus salmonis|type=mRNA|length=4203bp|location=Sequence derived from alignment at LSalAtl2s1088:46689..50891+ (Lepeophtheirus salmonis)
GCGACCTATAACTACTGTTTGTGTAAAAGGGAGGGAGAGAGAGAGAAAGA
AGAAGAAAGAGAGGGAGAGAGGGAGGGAAAGAGAGAAAGAGAAGGAGAAG
AAGTGTCAACAGAACCTCATCTCCACGAACACGGACAAATCCACACACCT
TTCATCATGGTTCTGAGTGCCATATACATCCTGGATATGAAGGGCAAAGT
TCTCATCAATAGAAATTATAGAGGGGATATTGAGAACAATGTGATTGAGA
AGTTTATTGGACAAACGACGATTGCCGAAGATGAGGGCTCAAGTGCTCCA
CTCATCAGCACAAGCGATGGAGTCACTTTTGCTTATATTAAAAGAAACAA
TTTATATGTCGTTGCTACTACGAGAAAGAATTCCAATATTGCCATGATTT
TCGTTCTACTTCATAAAATCTGCTCTGTAATCATCTCATTTGTCATTGAT
TCTATCGGGATGTCATTGATTGAGCCTCATTAGTCATTGTTGTCCCACCT
CTTCCTCTCTCTTTCTATATAAAATATATATATACATATATCTATTGCGT
ATAAGTTGCAATTTCTTCGTCTTTAATCCATTATTTCATGCCTAACTATA
CATTGAAGCTATCATTTTATTTTCCTCTATTAAAATTACATAGTTATTAT
GTATTTATGAATAATATAGCCGTGAGCATTTGCACCTTATAATGTGCCAT
AGAATACTTATATTTGAGTCGTTTTTATTAAAATAGTCAAAATTTAGACC
ACAAATATGTCAATCATCCCTAGAATATTCTATTTTTGCGGCATCCTCAT
CCCAAGTACTCTAAATCTTTCATTTTAAATTATTCATATTATTTTTTGGT
TGCAACTCGTTCACAACATTTATATATATATATACACTAGTATTTTCTAT
TCAAATTGAGTTTCTTAAATCTCCGTAAAATGACAATTATTTTTTTGGAT
TTTAAGACTTATAAATGTAATATCCATTTGAAAGTAATAGTATTACTTTT
AAAATTAGTCTAAAAGTAACGATAAACTTAGACTGGATATATTATAAGAC
TGTTATTTAATGTCATTAAAACAAATTATACACGATGTTGTCCAAAAATG
ATGTATTGTCTCAGCATGCATATACTTTTATTAATAGTCAGCAACTAAGA
TTGTATTAATTGCAATGACAAAATATCGTCAAATATATTTTTTTGAGAGA
GATACGTTTTTACGGAGCTTAAATTGATTTATATTTGGATAGGAATTWCT
TATTTATTTCCCCCCCCCCCTACATGTACTTAGTTTATGTTTATCCAAAA
ATTAATATGGCTTCTTTTCACTAATCATTTATTTATATTCTCTAAGGTTA
TGGAAGATTATTTTAAAGATGTTGAAGAAGAAAGCATTCGTGATAATTTT
GTTATTATATATGAACTTCTTGATGAGCTAGTTGATTTTGGCTATCCCCA
GACGACTGACGGTAAAATACTCCAAGAGTGCGTATTCAATATTTATATGC
AATAAATGAAAATATGCAATGACTTGTCATATTTCAGGTACATAACTCAA
GAAGGTCATAAACTAGAAGTGGTTGTTAGACCACCTCCTGCTGTCACTAA
TGCCGTTTCTTGGCGTCCTGAGGGGTTAAAATATACTAAAAACGAAGTTT
TTCTTGATGTTATTGAATCTGTCAACTTACTTGCGGGTGCGTCTGGAAAT
GTTTTACGATCGGAAATTGTTGGTGCTATTAAAATGAGAGTCTATTTGAG
TGGGATGCCGGAATTGAGGCTTGGTTTGAATGACAAAGTTCTTTTTGAGA
GTACTGGTCGTGGAAAGTCAAAATCGGTGGAATTAGAAGATGTGAAGTTT
CATCAGTGTGTACGTTTATCCAGATTTGATAATGATCGTACGATTTCGTT
TATTCCACCTGACGGTGAATTTGAACTCATGTCATATCGACTAACGACGC
ATGTAAGTATTCGATTCAATTGATTAGGTTTTCTATGAAGTTGGTTTGCT
TTTTCTAAAATTAACTTCTTTTTTTTTTTCTATTATTTTTAGGATGTAAG
ATTTTACGATTTGTGGTTTGAAAGTTATTTTAATTTTAGTTCTAAAATAT
TGATTTAGAAATTTATAAAGATAGTAATGTTTAGCACAATTATTAATTTT
TTTATTTAAGTCTTTGTACTAATTATTTTATTTTTACATATGGCAACGAT
ATTTAACAAAATCTAGTTCCTGTACATATTGCCATATAAACTCTTTACCT
TCTAATGCTACAATCTCAATAACCATTTCAAAATCAATATCATATCAATT
GTACGAAAAATGATTTATTATTTTTAGCTTCAGACTATTTTATATATGTA
TAGCGCGTTGTTTGTCATTGTGTAATATATTTTGAAGTGATAAGTAGTAC
ATAGTTTATTTATTCACCTTAGAAGTAATACAGATGATACTTAATGATTA
TGTATTATGTTAAAATACATTTCTATCATTTATCTTATTTTGATGTATTC
CTAGGTGAAGCCTTTAATATGGATTGAATCTGTGATTGAACGACATGCTC
ACTCCCGAGTTGAATATATGGTTAAAGCAAAGTCTCAGTTCAAAAGGAGG
TCCACTGCAAATAATGTAGAAATAGTCATTCCTGTCCCTAATGACGCAGA
CTCTCCGAAATTCAAGACGACTTCTGGTCATTGTAAATATGTACCAGAAC
AGTCCTCCATCATTTGGACTATAAAATCCTTCCCCGGTGGAAAAGAGTAT
CTTATGAGAGCTCACTTTGGACTACCGAGTGTAGAGTCGGAACTCACAGA
AGGGAAACCTCCTATCCATGTTAAATTTGAAATACCATATTTTACAACTT
CTGGAATTCAAGTGAGTCGCTTGATTTATACCACACTGCGTTAACTCTTT
CCGAAACAATATTTTTTTGAAACGAAATCTTAAGTTTCTTTATTAAACCT
ACATAAACAACCCAATTTGTGCTCAGTACCTCAATATGTTCCAAAGTTTA
ATGGATATTAACTGTGACCATATATAATCTTCGTATCAATTTAGATTAAA
ATGGATCTGTAACCTTAGCCGGTATCCTGTTGACCAACAGACAAACAAAC
AGACGTAAAACATAACCTCCGTTCAACTTAAATTTAGCCAAATTATGATT
TTTTATTGATAACTTTCTTTTTTTAATTTAAGATAAAACTATCTGAAATC
AAGAATTGCAGGGAAATTTTTATCAGAAAAGTCTTAGCTCAATTTTCTTA
AATTCTTAATTTGATTATTTTTCCATCTCTTGGAAAATAGTTAATCATTT
TAAATAACACCGAAATAATTAAATTGGCCATTTTTATGTACTAAGGTTTA
AAAAAAATCCAGAATATCCACTTTTATTCTTATTGATACAGTATTTATTT
GAATTAACTTATCTGGAATTATACGTCATTGTTTGCTATGAATCAATTAT
AAATATGGTAAATATCATTTGTTTCTTGCTTCACTGTCTTGAAAGGAAAT
TGAGGGGGAGAGTTATTAGATTGACTATGTATGTTTGTACTGCTCAAGGG
GTCTGTTCTTCTACTCGTGCTATAGATTGCCATTTTGACTTTTCATTCAT
TTTTACATCATCATTTTTTTGCAGGTAAGATATTTAAAAATCATAGAAAA
GTCGGGATATCAAGCCTTACCCTGGGTTCGCTACATCACTCAAAACGGAG
ACTATCAACTTAGAACGAATTAATATATCGATATATACTTTAAAGTGATA
AATAGTGATTATCCTTACTAATTATTATTTTATTGAAATTTACATTCCAA
TTATATTTTAGTATATGTTCTACGCCGAATTCACTTCTAACGTCGTTTTT
ATTTATATGTCGGGGGGGGCTAAATATTTTGGCCATACTTAATTGTTATG
TTTTTTATTATTATTATTATTAATGGTCTTTGTGTACTTCTTTTATCCAT
CACTAAAAAATATGTAAGTAGACAAAAAATAAATAAAGTTGATTCAATTA
TTGCTATTTTTGTTCAAATCTAGATTAATATTGTTTTCCTCTTGTCAAAT
CATAACTATTGTGCGAATAGAGCGCGTTCACGTGACGTCAGCATTGTGTA
TATCTGCCATTTTGGGGCCTTGAGCAACCAAGTTTGATATAAATGAAAAC
CCTTTTTTCATTAATATTAAGGAGAATGGTCAACTGTTGGGTCATGTCAG
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