EMLSAT00000000543, EMLSAT00000000543-696390 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000543
Unique NameEMLSAT00000000543-696390
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1089supercontigLSalAtl2s1089:95639..99073 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000543 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000543EMLSAG00000000543-683309Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002349EMLSAE00000002349-711277Lepeophtheirus salmonisexon
EMLSAE00000002350EMLSAE00000002350-711278Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772000auto772000Lepeophtheirus salmonispolypeptide
EMLSAP00000000543EMLSAP00000000543Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000543

>EMLSAP00000000543 ID=EMLSAP00000000543|Name=EMLSAP00000000543|organism=Lepeophtheirus salmonis|type=polypeptide|length=69bp
MADCNDNPGKKKLFNVMYLMVHAVCNKWEIMDVSSYSIMGHKFICSSGVH
CSCIVYFILPLVVYLEKKP
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mRNA from alignment at LSalAtl2s1089:95639..99073+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000543-696390 ID=EMLSAT00000000543-696390|Name=EMLSAT00000000543|organism=Lepeophtheirus salmonis|type=mRNA|length=3435bp|location=Sequence derived from alignment at LSalAtl2s1089:95639..99073+ (Lepeophtheirus salmonis)
ATGGCAGACTGCAATGATAATCCAGGTAAAAACATTGACGAAAAAAATTC
GTCTCAGAAAATGAACCATCGTCATCATCTTTCTTGATTGAAACGCCTGA
GGTGGAGTTTTTTTGTTTTTTGTTTGTTTTTTCAATAATTATAATGCAGA
GGATTGCTATGATTTATATTATTGTTGACAGTGCTCCAAAAAAATAAAGA
CAACATACGGTATGACTAGTAAATGACTCCTAATCGATCTAATTTCATCA
TATACATTCTATGTATCAAGCAAGTAACATTTTTATAAATAAAATCTCCA
TTTTCCGGCCGTAATCTTCATCTATCTGACAACCTTGAATAGCTAGAGGG
GAGAAAAAATAAAATAAAAAGTAATAAATAGGGGTGATATTTAATTGTTA
TTCCCATTATGAGTCAAAAATAAAATAACAAACCAATTATATTTGATTAT
TTAATACGTTAGAAAAAATATGAAGTCATTTCCCCATTTCCTTTATTTAT
TTTTTCATTAACATAAGTATATTTATTTATNAGAGTGTATTGTTAAATTG
TACAAACAGCAAGTTATTTGTTCATTTATATAATTTGCTCCAACAGCTCT
TGCGTAATATACATAAGATATGAGCGGTCAACTCACTCAAATAATAACTA
CAAGCTGTGTCTTTATTATATGTTCTGCAATTTCTTGTTTTTTCACGTTC
TCTCTCTAGCTTTTCAAACATGCATTATATGATAAAACAAATCGAATATC
TGTTAATCAAGCAAATAATAATTGATCTATTGAGAGTTATGTATCAAGGA
AAAAAATACTGGTTTGATCTAGAATCTGTAATTTACAACAATCATATGTA
GTTTGATGATGTAAAAGGAAAGACGCTTTTGATGAAAACCCCTTTAGTAG
ATAATATTAGCACAAAAAAATATGTATACAATTTCAATAGAAGGTTGAGT
GAGGGCTAAAGAATGTACATTAACAAAGAATTAATTTATTTAATGGTTAT
TAATAATATCTAATTTATTGTGCATTGAAGCGGAGTTGATCTTAGATGAT
GGTTTATTTCTTATTTTAATCTGAAAGGGTTAAAGTAATCTATCAATGGA
TGGACAAAAGGAATGCTTCAATAAATAATTCCATTCTTATATTCTCTCAA
ATATTTTTATAATAGAATATTAATTTTGTATATTTATTTATATTGTTTGA
CCGATGATGGCGAACGTTTCCCATCAAAAAGTGGTCTATTTTTGAGAGGT
GGAAAATGGATATCAGCTAACTATTATTTGGTTACCTGTAATAATATTAT
AATATGCATTAATTTTTGATTGGTAGTAACATGATTATGTAATCATTATT
TACTTTTTCTTTTTAGGTAAGAAGAAACTATTTAATGTTATGTATCTAAT
GGTCCACGCTGTTTGCAATAAGTGGGAAATAATGGACGTTTCATCCTACT
CAATCATGGGTCATAAATTTATATGTAGTTCAGGAGTGCATTGTAGTTGC
ATTGTATATTTTATCCTACCTCTTGTGGTGTATTTAGAAAAAAAACCATA
GTCTTATGTGCAATGCTTCCGCACTGCAAGTCCTTGGCTCCATAAACTGC
ATCACTACCTTCGATTTCTGTCCGGACAGAACATACTTTTTATATTATGA
ATACTAGATTGCGAGTTTTGTTGAGATGAATGGCCAAATGGCCGCAATTT
CGATCTGTTTCATACCTTTAGATCGAGTTGATTCATAGTCTACGTGAATA
TTTTTTCCCAACGCAAGATGTCGCTTTTTATAATACCATGATTCATGAAT
GATTAAAAAGTAACCTTTTCCCCCTTTCCAAAATTCACCTAGATAATTAA
AAAGGGGGATCCCTGGAGATTACATAGTTAGTTATAAGTAAAGGACTCTA
GGCAAAGAGTAGACTCTCAAGGCAGGGAAGGTAGGATTTAGAAGTTCTCA
ATTCTGATTGAGTTATAATTAGAAACTGCTACATGTTCCTCCAGCTAGGC
ACACAGGSGAGGGGGGGGGGGTGAGTGAAGGAGKGAGCCCTCCCCTGAAA
AGAGAAAAATTAGGGCCAACTACGTTAGGAACATAGTGTTCCTTGTCCTT
CGATTGAATTGCTCATTTTTCCCTTGAGCGCTCATTCCCTCGAGTCCTTT
AATTATAAGTTAATATTCAAATATACTCAACGCTCCGTAGTGGACAAATT
AGTAATTGGGTAAACAAGTATATTTGGATAAATATTGATGACGTTGTCCT
CGTTTTGCCATTTGCTTTATTTTTTCTGTTTGATGTACACAACTGACCAC
TCAGATGCATTCTATCCAATTAATTTGCAAAAGCTTGCAGGATCTCAAAT
TACTCAGTCACTGTTGAATAAGTATAAGAAATATCGGTACTACTGAAATG
AGGGGAAACAACTTCTTCAAATAAGTTAATTCCCCATTTTTTTAGGACTT
TTTTTTAACATACCTAGTAGAACTTTGATACTTTGCATTAATCGTTAAAT
TTTTATTGAAACACTAGTGTCGCACATCAGCTGACAAGACGTTCACGGAC
GTTAACAGTTCTTATTTCATTGGTTATTGAGAACAAGTTATAAAAAAAGC
CCCACCAAACTGTAAAAATGTCATAACATTTATAGTTACGAGTGTTTTGT
CAATGATGATAACTACTATCAAGATGTGCACATTTTTCCCAATTTGGTGT
TGCTTTCATTTGTAACGTGAGTGAAAACACTCTTATTGATATATCACATC
ATTACCTGCTTTATTGTATTTATCAACTTTTCTTCGAAAAAGAAATAGAA
AAAAGGCCCAAAATCAATTCTTAGCATCTAGTCACTATCAAAGTTAATAG
AAATAGAAGGATATACCATTACGCGTTTACGACTGATGTTTGACTTCCGC
CACGCTTTTAATATTGACGTCATGATAAATGAGTGGTTGTGTGTTTTGTC
AAAATCTGCCTGTCTTGCCCAGCAGTCGATGCAATACATCAGATTGAAAA
TTCTAACAAGGAAGATTACATGATGGTCTAACCTTGTATTTCTATTAACC
TTGAGTATTATGAAGTTATTATTCAATAACTTTTTGAAATGTTTCACAGC
CTGACACTACTGATAAGGGGGAAGGAAGCAGACCATTGACAGCTGACAAT
AAAATACATTGTATATTTGTTTATTAGTGAGGTAGTACTTTGATACAGAA
CCATAGAGAAAGATAGAAAGACTAGGTGAGATAAAGGGATCAGTAAAACG
TTTTTCACAGTCATTTGTCAACATATATATTCTATGTATATAACGCATCA
AAGTACTAAGTACCAACTGTTCTTTTTTCGTTATTATCTTAAGGCAACTC
AACTATGTAGTTCTCAACATTCTCGCAACCCTAATATTATATCTTATTCC
TTTATATATTACATACTTTGTTTATTTGAAATACA
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