EMLSAT00000000558, EMLSAT00000000558-696405 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000558
Unique NameEMLSAT00000000558-696405
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1091supercontigLSalAtl2s1091:26405..29491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000558 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000558EMLSAG00000000558-683324Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002422EMLSAE00000002422-711350Lepeophtheirus salmonisexon
EMLSAE00000002423EMLSAE00000002423-711351Lepeophtheirus salmonisexon
EMLSAE00000002424EMLSAE00000002424-711352Lepeophtheirus salmonisexon
EMLSAE00000002425EMLSAE00000002425-711353Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769731auto769731Lepeophtheirus salmonispolypeptide
EMLSAP00000000558EMLSAP00000000558Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000558

>EMLSAP00000000558 ID=EMLSAP00000000558|Name=EMLSAP00000000558|organism=Lepeophtheirus salmonis|type=polypeptide|length=653bp
MAQSDSDNAPLKQVLEKVMKSYVNGVYRWNAGNNERRDGLKNFLKIFIQN
ASRKDFRKLGHEALQKSWKEYEKSAYFSQTAPHFIYRIISKDRFPHIYRI
DSRSTFYKFNHPLVPSPVPCGYKKCSMTPGEDSVQNVISVVCTNACHMFF
HSSCFYEHIKTYGVLCTLTSECYALWTSCQVFGSTPEDFLKFCKVDAAID
KLECVEGPCLIQERFEDHEDPNKQTELRICKRLQEMWPSEEFEMEAENVR
DIIATKVNNANFTEIMNSEICIRVQKSPRKVVQSPSPVKSQGSRKRPAMD
SSVWTTSCVIEDPPFLTINLSNSSHIDKSDASTEPIVKNSDKGTDAMEIR
KKTRXTTXTRKIKGIXSRYTQYNSQKTSDKSIGTNKPTSDRGTEATHVDK
VDAQTETFIRSSIAVGVQTGRVEVREFLISNHQLFKMEQEFINYRYEEFN
ARCXLLKSAANTSLENGRIQVVRANALINAFRGMINEVRRKKLASQFVTE
SLRTYLRRIIMHKDDTERWIGEVEEHCCALQTNEDFXKPLLDYSLEFLLG
LFPLPPPPEMNKLLSDCIFNELIVTGFHNFNDPNNLLLLDLVKEAVIEFP
IAGKDAVIWSLFHIRRRVEFLDGIDLCKVLFRVLTQFTDNVIIESRKLVV
YIA
back to top

mRNA from alignment at LSalAtl2s1091:26405..29491+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000558-696405 ID=EMLSAT00000000558-696405|Name=EMLSAT00000000558|organism=Lepeophtheirus salmonis|type=mRNA|length=3087bp|location=Sequence derived from alignment at LSalAtl2s1091:26405..29491+ (Lepeophtheirus salmonis)
TAAAAATCTATGAAGAGTTGGGATCTTCATCTCATTGTGGACTCAGTCAG
CCAAGAGGGGTGATTAATTGTAATTTGGATCTGTGATATAATTATTTTTC
GTTATTAAATTTATAATCATCCGTCATCAACAATAATATGGCACAGAGTG
ATTCTGATAATGCTCCATTGAAACAAGTATTGGAAAAAGTAATGAAGAGT
TATGTGAATGGAGTTTATCGATGGAATGCAGGCAACAATGAGCGAAGAGA
TGGCTTGAAGAACTTTTTAAAAATCTTCATTCAAAATGCCTCTAGAAAGG
ACTTTCGAAAGCTTGGGCACGAGGCACTACAAAAGTCATGGGTAATATAC
AATTTTGAGTGGTTCTTCCTTCATTCCTAATGTTGTGTTCTCATAATTTA
TATTTATTTACAGAAAGAGTATGAAAAAAGTGCTTATTTTAGCCAAACAG
CCCCTCATTTCATATACCGCATCATTTCCAAGGACCGATTCCCGCACATA
TATCGCATTGATTCCAGATCCACTTTTTATAAATTTAATCACCCTCTAGT
CCCGTCTCCAGTGCCATGTGGTTATAAAAAATGTTCAATGACACCAGGGG
AAGACTCTGTTCAGAACGTGATATCCGTCGTCTGTACAAATGCATGCCAC
ATGTTCTTCCATTCCTCATGTTTTTATGAGCATATCAAGACTTATGGAGT
CCTTTGCACACTCACATCCGAATGCTATGCTCTATGGACTTCCTGTCAAG
TCTTTGGTTCAACTCCAGAGGATTTTCTTAAATTTTGTAAGGTTGATGCT
GCAATCGACAAATTAGAGTGTGTGGAGGGCCCTTGTCTTATTCAGGAGAG
ATTTGAGGATCATGAAGATCCCAATAAACAGACTGAACTTCGAATATGTA
AAAGGCTTCAGGAAATGTGGCCCTCTGAAGAATTTGAAATGGAAGCAGAA
AACGTGAGGGACATAATCGCCACCAAAGTCAATAATGCAAATTTCACGGA
AATTATGAACTCGGAAATTTGTATACGTGTACAAAAATCACCCCGGAAAG
TGGTCCAGAGCCCTTCACCAGTCAAATCTCAAGGATCGAGAAAAAGACCT
GCGATGGACTCGAGTGTTTGGTAATTAGAGCCTGTATTGATTTTTCTTAA
TTATAATTGTTTTTCCCAGGACTACTTCTTGTGTTATTGAGGATCCTCCG
TTTTTAACCATAAATCTGAGTAACTCCTCCCATATTGATAAATCAGATGC
TTCGACGGAGCCTATAGTCAAAAACTCTGATAAAGGCACTGATGCTATGG
AAATCAGGAAAAAAACAAGGAGWACAACTKCTACGCGAAAAATAAAAGGC
ATCTSGAGCCGCTACACTCAATACAATTCGCAGAAAACGAGCGATAAGTC
AATAGGAACAAATAAACCCACAAGTGACCGTGGAACCGAGGCAACCCATG
TGGATAAGGTTGACGCCCAAACTGAGACATTTATACGATCCTCAATTGCC
GTTGGTGTTCAAACTGGCCGTGGTATTGCGTTGAATTATATAGTTACTTA
TTTCTGATTAATATATTTATTTATTTTTTGAAAGTTGAAGTACGAGAATT
TCTCATCTCTAACCATCAGCTATTCAAAATGGAGCAGGAGTTTATTAATT
ATAGATACGAGGAGTTTAATGCCCGATGTAGKCTCTTGAAATCTGCTGCC
AATACGAGTCTTGAGAACGGACGAATCCAGGTCGTACGCGCTAATGCTCT
CATCAACGCATTTCGAGGGATGATTAATGAGGTTCGAAGAAAAAAACTCG
CATCTCAATTTGTCACCGAGTCTCTGCGAACCTATCTTCGACGTATCATC
ATGCATAAAGACGATACTGAGAGATGGATTGGAGAGGTAGAGGAGCATTG
CTGCGCGTTACAAACAAATGAGGATTTTATKAAGCCACTACTGGACTATT
CATTAGAGTTTCTACTGGGGCTTTTCCCTTTGCCTCCCCCTCCAGAAATG
AATAAATTATTATCTGACTGTATTTTTAACGAACTCATCGTGACAGGATT
CCATAATTTCAACGATCCCAACAATCTCCTCCTACTTGACCTCGTGAAAG
AGGCAGTTATAGAGTTTCCCATTGCGGGGAAGGATGCAGTCATTTGGAGC
TTGTTTCATATCCGAAGGAGGGTTGAGTTCTTGGACGGAATTGATTTGTG
CAAGGTTCTCTTTCGTGTTTTGACACAATTTACGGACAATGTTATCATCG
AGTCCAGAAAATTGGTCGTGTATATTGCATAAAAAATCTATTTTTCCTGT
ACATATATAACTATGTAGTTTTAATTATAAATATTATTTTTTAGATTAAT
GATTTTTCATAATATTTTATATGGAGATATAATTGTAATTTTTTATGAGG
AAATGTTCAGTTAAATATATATATATATATATATATTTATATCTAATTGC
AAGTGGTCTTATTTTGCTAATTAATGAACAATATACATACAGATGATAGA
AATAGGATGAAACAACCAGTTGCCTATTCGTTATTACATGTTTAGTGCGT
TTTCATGGTGCCAAGTAATTTTGCCTTGAAAGCATTTTGTCCCAAGGATA
TTTCGGCTTAATTTATATAAATAAATTAGGTTTAAACGTCGTTTTTCATT
ATTTTTACGAAAATAAAAACCTTTTTTTTCCCCGTTAATATTAAAGAAAA
TAGTCAAGTATTGGTTGTAAAATTGGACCAATAAATAAAAGGACCTTACT
ATCAAAAATATAACTAGTGCTTATTATATAGTCAAATCCAGATAAAGGAA
TCTACTATTTCTCTGATAAACCATCTGAGTTATGTAAAAAAGCACAATGT
TTGTATACTTATGTATGAGTAATTTTGAAATTCCTCATTCCGAGGCAACC
TTTTGTTTGATTAGATCCTGTTTGTGAGAGATCATCCAGGTTTTTTTAGC
TTGTCCCTCAGCAAAAGTGTATTATAGGGAGGTACTCGTGATTAGTGATC
TAGAAGTCATTATTTGTTTCCTTCGGACTATCAGTACTAGAACTGATTAA
AAAGTCGATAAAATAATGGAAATCGTCTAGTTGGACC
back to top
Add to Basket