EMLSAT00000000591, EMLSAT00000000591-696438 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000591
Unique NameEMLSAT00000000591-696438
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:308045..310430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000591 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000591EMLSAG00000000591-683357Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002576EMLSAE00000002576-711504Lepeophtheirus salmonisexon
EMLSAE00000002577EMLSAE00000002577-711505Lepeophtheirus salmonisexon
EMLSAE00000002578EMLSAE00000002578-711506Lepeophtheirus salmonisexon
EMLSAE00000002579EMLSAE00000002579-711507Lepeophtheirus salmonisexon
EMLSAE00000002580EMLSAE00000002580-711508Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776165auto776165Lepeophtheirus salmonispolypeptide
EMLSAP00000000591EMLSAP00000000591Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000591

>EMLSAP00000000591 ID=EMLSAP00000000591|Name=EMLSAP00000000591|organism=Lepeophtheirus salmonis|type=polypeptide|length=693bp
MRSDRYWVVFSVHDETLPFLELWNEPSEVATKPPVMMFPLIICQHISPSL
VPADTEWTFVINFEKSAVRFSCNSRQTMEEWVECIRNKLGEMGIFNPRGN
LYSKIGNPFLNHSTSMISIQPVATSRNPMSPLPEPPLIGLNEIPCSSSSP
IVLNNTAGSRTSIVDASDTSNQTFTTSIYLNQSPPSTPPLASSLQSSSPT
NTTPNAAQSSSASSTPNSNSGGARPKVAPTTGASSVYLNKTNPTRHVTVI
PINNAAEDSGEASREESSASPTRSAASEKQQSRRRSRRNSQAPPIISEPN
GSLNVNTNESNRRLSRRLSDCNSQRRRRTKRSSSLGPLLDDQHIASAIAG
LGTRTNSLESVDSNPRQALAKSDRRANYHRRPLPRIPGLSESNPPIPLFG
SPPRPSFHLPGSAIPPHVPIPGLTCHPSYLIPNPATAPPPPQTPGATSPP
QSLPTNVNNNPLPPHLHPDMIQSSRSPKEQQVTCLRQEIGHPAGVRLTLR
KRDCINSIALVDIFGCLWVAGWKKQTDFPILYKAFHLGDQIVSMGSGGVP
VRSASEFHKIVKQKTAEMHIEIIVRRIPFGQTFFIKRETEGQPLGIVANS
TNSDIKEVIPGSPASVHGMIPKIRSFDGQTFVPWSITEINGRPLNILNKD
GEAAERLANTGREMSIVIQPSDIINKLRKQLKSVKNYKDYLLI
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mRNA from alignment at LSalAtl2s109:308045..310430-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000591-696438 ID=EMLSAT00000000591-696438|Name=EMLSAT00000000591|organism=Lepeophtheirus salmonis|type=mRNA|length=2386bp|location=Sequence derived from alignment at LSalAtl2s109:308045..310430- (Lepeophtheirus salmonis)
GTTGCCTCACAATGAGAAAAAGAGCTCAGCACTTTCTAAACTCATGAGAT
CGGATCGATACTGGGTCGTTTTCTCTGTTCATGATGAAACTCTACCCTTT
CTCGAACTATGGAATGAACCCAGTGAAGTGGCTACAAAACCTCCTGTCAT
GATGTTTCCCTTAATTATTTGTCAGCATATTTCTCCATCTCTTGTGCCAG
CGGATACGGAATGGACATTTGTGATTAATTTTGAAAAATCCGCCGTGAGA
TTTTCCTGTAATTCCAGGCAGACCATGGAGGAGTGGGTTGAATGTATCCG
TAACAAACTTGGAGAGATGGGAATATTTAATCCTAGAGGTCAGTATTCTT
TCTCTTTCCTACCTAAAATTATATTTTACTTTTTATTTGAAGGTAATTTG
TACTCTAAAATTGGGAATCCATTCTTGAATCATTCCACTTCTATGATAAG
TATCCAACCTGTTGCTACATCACGAAATCCAATGTCTCCCTTGCCAGAAC
CCCCGTTAATTGGACTTAATGAAATTCCTTGCTCCTCTTCATCACCAATT
GTTTTAAATAATACTGCTGGATCACGGACAAGCATTGTTGATGCATCAGA
TACATCTAATCAGACATTTACAACTTCAATTTACTTGAACCAAAGTCCAC
CAAGTACACCCCCATTAGCATCATCATTGCAGTCATCCTCTCCTACAAAT
ACAACCCCCAACGCGGCTCAATCATCATCTGCTTCATCCACTCCAAATAG
TAATTCTGGAGGTGCTCGTCCAAAAGTGGCTCCCACTACTGGAGCGAGTA
GTGTGTATTTGAATAAAACAAACCCTACAAGACATGTGACAGTGATACCT
ATAAATAATGCCGCGGAAGATTCTGGTGAAGCTTCCAGAGAAGAATCTTC
GGCATCACCCACAAGAAGTGCAGCTAGTGAAAAACAACAGAGTAGAAGAA
GATCTCGTCGAAATAGTCAGGCACCACCTATAATATCTGAACCTAAGTAA
GATTTCGCTTATACCTCATTCATTGGGCATTATATTTTTATTCGATATAC
ACTTATTTTTCCTCCAATTTTTCAAGTGGAAGTTTAAATGTCAATACTAA
TGAGAGCAATCGTCGTTTGTCTCGTCGTCTCTCAGACTGCAACTCTCAAC
GCAGGAGACGAACAAAAAGATCTTCGTCTTTAGGACCTTTATTGGATGAT
CAACATATAGCTTCAGCTATTGCTGGATTGGGTACTCGAACCAATTCATT
GGAAAGTGTAGATTCTAATCCAAGACAGGCATTAGCAAAAAGTGATCGTC
GAGCAAATTATCACAGACGACCATTACCGAGAATACCTGGATTATCAGAG
AGTAATCCACCCATACCTTTATTTGGTAGCCCTCCAAGGCCAAGCTTTCA
TCTCCCCGGATCTGCTATACCTCCACATGTACCGATTCCAGGGCTGACTT
GTCATCCTTCATATTTGATACCTAATCCTGCTACAGCACCCCCACCTCCT
CAAACCCCTGGTGCAACTTCACCTCCTCAATCTCTGCCCACAAATGTAAA
CAATAATCCCCTGCCTCCTCATTTGCATCCTGATATGATTCAATCTTCTC
GGTCTCCAAAAGGTAGACTATGATCCCAAAATAAATTTTTATTGATTAAA
TAAATAATTATATACTTGTTTTTAATTTTTTAAAGAGCAACAAGTAACTT
GCCTACGCCAGGAAATAGGACATCCAGCTGGAGTTCGATTAACTCTTCGT
AAAAGAGACTGTATAAATTCAATTGCACTTGTTGACATTTTTGGATGCCT
CTGGGTAGCGGGATGGAAAAAACAAACAGACTTCCCTATTTTGTACAAGG
CTTTTCATTTGGGAGATCAAATTGTCAGTATGGGCTCTGGTGGCGTTCCT
GTTCGAAGTGCATCTGAATTTCATAAAATTGTCAAGCAAAAAACAGCGGA
AATGCACATTGAAATCATTGTTCGTCGAATACCATTTGGTCAAACATTTT
TCATTAAAAGAGAAACCGAGGGTACTAAAAGTGTTTTTTGATCAATTTAC
TCATAATAAATGTGTATATATAATTTAGGTCAACCCCTTGGTATAGTTGC
TAATAGCACTAATTCAGATATTAAAGAGGTTATTCCTGGGAGCCCAGCAT
CTGTTCATGGTATGATACCGAAAATACGAAGCTTCGATGGACAAACTTTT
GTTCCATGGTCTATCACAGAAATAAATGGTCGACCCTTAAATATTCTGAA
TAAGGATGGCGAAGCAGCAGAGAGATTAGCTAACACTGGAAGAGAAATGT
CTATAGTCATTCAACCGTCTGATATTATTAACAAATTAAGGAAACAACTC
AAATCAGTGAAAAATTACAAGGACTACCTACTCATA
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