EMLSAT00000000597, EMLSAT00000000597-696444 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000597
Unique NameEMLSAT00000000597-696444
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:417953..421106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000597 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000597EMLSAG00000000597-683363Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002599EMLSAE00000002599-711527Lepeophtheirus salmonisexon
EMLSAE00000002600EMLSAE00000002600-711528Lepeophtheirus salmonisexon
EMLSAE00000002601EMLSAE00000002601-711529Lepeophtheirus salmonisexon
EMLSAE00000002602EMLSAE00000002602-711530Lepeophtheirus salmonisexon
EMLSAE00000002603EMLSAE00000002603-711531Lepeophtheirus salmonisexon
EMLSAE00000002604EMLSAE00000002604-711532Lepeophtheirus salmonisexon
EMLSAE00000002605EMLSAE00000002605-711533Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777484auto777484Lepeophtheirus salmonispolypeptide
EMLSAP00000000597EMLSAP00000000597Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000597

>EMLSAP00000000597 ID=EMLSAP00000000597|Name=EMLSAP00000000597|organism=Lepeophtheirus salmonis|type=polypeptide|length=484bp
MMIRNAAYTTKSSLRMVSCRYFSGEPACPSVTTPIPGPKSKALMDDLNKI
QSMDSVSFFVDYEKSYGNYIIDADGNTILDMFTNISSIPIGYNHPALLNA
FNSESKIKQLVNRPALGVYPGVNWSQQLRDILVSAAPKGLDQVTTMMCGS
CSNENAFKLMFFKYMDKQRGGRAFNDEENESCMVNLAPGTPNLAVLSFHG
GFHGRXAASLSXTHSKAIHKLDIPLFQWPACDFPRYKYPLHENERENRLE
DDRCLAQVEETIEAQEKKGVPVTGIIVEPIQCEGGDNIGSNYWFQQLQKI
CSKYDIVYHIDEVQTGGGPSGKLWAHEWFELDGPPDVVTFSKKMLTGGLY
HKKELRPKQGFRIFNTWVGDPGKLILLDAVLKTINEEKLLDLTMKTGEAL
RVGLDDLTAQFPGILSAPRGMGTLRAVDINTPARRDEIIGKFRAEGINVG
GCGFSALRLRPALIFGPKHAEMFLDTFKKILKSY
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mRNA from alignment at LSalAtl2s109:417953..421106+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000597-696444 ID=EMLSAT00000000597-696444|Name=EMLSAT00000000597|organism=Lepeophtheirus salmonis|type=mRNA|length=3154bp|location=Sequence derived from alignment at LSalAtl2s109:417953..421106+ (Lepeophtheirus salmonis)
TTTTTATAAAACCGTCATTTGCACAAAATTAATTCAATTATTAATTTAAA
GACTTCTTGTTTTTCTTACCAGATCAATTATCGATGTAAGTATTATTGCC
AGGGTCTTGGAAGGAATTAAAGTCTACGCCCAAAAATTATTGATTATTTC
ATATATATGTATATATATATTTAAACCTTTATAAATTCAATTTTATTAAA
CAGTATTCTCTAATACCAAGTGCCTTTAAACCCTACAATTCGATCCGCAT
ACGAATATCAAAGTGAAGTACGATTTATATTAGATAAGTACTCTTCACCC
CTTTAGTACTTTTATTTTCTGGATATTTTCTGCAGTTTCTAAATGCTTCA
AAAAATGCATACCTCCATTCCTCAAGTTTAAAAATTATGTTTTCAAATAG
AATAACATTTCTCTCACTTAAAATAAAATGTATTCAATATTATATTCATG
CAGCCCTTACAATTAGTATATTCGCTTAAATGATTCACATTGTATTCTTA
TTATTGATACACATCACTTCCAATTGAATAACTCGTTATTCCACTTTTGA
TCTCTATTTATCTCTCTCTGTAAGATTACATTTAATACATATTTGTTTAT
TTTAATAGAAAATGAAATCATTTTGAAAGAAGCTCATAACTCCCTCAGTA
AGACAAAAAAAGATCACGATGATGATTCGTAACGCCGCTTATACTACTAA
AAGTTCCTTGAGAATGGTTTCTTGTAGATACTTTAGTGGAGAGCCTGCAT
GTCCATCCGTGACTACTCCCATCCCTGGACCAAAGTCTAAAGCACTTATG
GATGATTTAAACAAAATTCAATCCATGGACTCTGTCTCCTTCTTTGTTGA
TTATGAAAAATCCTATGGAAATTATATTATTGATGCGGATGGGAATACTA
TTTTGGATATGTTTACGAATATATCTTCCATACCCATTGGTATAGTAGAG
CTCATTGAATATCTACATATTAATTAAATAATTTACTTCACCATTTTATA
TATATAGGGTATAATCATCCAGCTCTTTTAAACGCTTTCAATTCTGAGTC
CAAAATAAAACAACTCGTCAATAGACCTGCATTGGGAGTGTATCCTGGAG
TAAATTGGTCTCAACAGCTTAGAGATATCCTAGTATCTGCAGCTCCTAAG
GGTCTAGACCAAGTTACCACTATGATGTGTGGTAGTTGCTCAAATGAAAA
TGCCTTTAAGCTCATGTTCTTTAAGGTAGGATATGAAGCCAGATAGGCTA
TTATAAGTATTAATGCATTTATTATTTATTAGTACATGGATAAACAACGG
GGTGGAAGAGCATTTAATGATGAGGAAAATGAATCCTGCATGGTTAACTT
GGCTCCAGGTACACCAAATCTGGCAGTTTTATCTTTCCATGGAGGATTTC
ATGGTCGAKCGGCTGCCTCGCTCTCATMTACCCACTCTAAGGCCATTCAT
AAATTAGACATTCCACTATTTCAATGGCCTGCATGTGATTTCCCTAGATA
TAAGTAATTACACTTTTGATCTTATTACAAAAAAATTAATTAAAAATTTA
ATTTTATTATTAGGTATCCCCTCCATGAAAATGAAAGAGAGAATCGTTTG
GAAGATGATCGGTGTTTAGCACAAGTTGAAGAAACTATCGAAGCACAAGA
GAAAAAAGGAGTTCCAGTCACTGGAATTATTGTAGAACCCATTCAGTGTG
AGGGAGGGGACAATATAGGAAGCAACTATTGGTTTCAAGTAATCCTTTGA
GCTTTGATATATTATCCGAATTTGAGCTAGTAAATTTTGTGTTAATTTAG
CAATTACAAAAAATTTGTTCGAAATATGATATTGTTTATCATATCGATGA
AGTTCAAACAGGTGGTGGCCCATCTGGAAAGCTTTGGGCGCATGAATGGT
TTGAACTGGATGGTCCTCCAGATGTTGTTACTTTTTCAAAGAAAATGCTT
ACTGGTGGCCTTTATCACAAAAAAGAACTGAGACCCAAACAGGGCTTCCG
TATTTTTAATACTTGGGTTGGAGATCCAGGTTTGAAATAATATTCTACTG
TTTAAATTTCCTTAGGCGAATAATTCATATCCCCAAATCCAGGTAAATTG
ATCTTATTAGATGCTGTTTTAAAGACTATTAATGAGGAAAAGCTACTGGA
TCTTACAATGAAAACGGGTGAGGCTCTACGAGTTGGATTAGATGATCTAA
CTGCTCAATTCCCTGGAATTCTTAGTGCTCCACGTGGGATGGGAACTCTG
AGAGCCGTTGATATTAATACTCCTGCACGAAGAGATGAAATAATAGGCAA
ATTCCGTGCTGAAGGAATAAACGTTGGTGGATGTGGTTTTTCGGCGCTGC
GTTTAAGACCTGCTCTTATATTTGGCCCCAAGCATGCTGAAATGTTTCTT
GATACCTTTAAAAAGATCCTCAAGTCCTATTAATTCATAACTATACATTT
CTCTTCATTTAAACAAAACCAAATGTGCAGTGGGATAATTATTGGCTTCT
TTCTTTTCGTGATTTTTAATGAATCTGTCCAGATCTTTAGGCTCATTTCA
ATGGAATCTTTAATGGAAATTACATTTACATTCATTATAATAGATAACTA
ATAGGTGGTAATTTTATATTTGACATTAATTATTTTCCTCACAATATATG
TAATGTACTGTTTCAAATTTATTGATTAATTAATATTAGTCTTATTTTAA
GTATATATATTTAGTTTATGAACAAATTATACTATTTACTATTGTCCACG
AATTTGAAATATCTATCATTATAATATAAAAATATATTTATATATATAAC
TTCYTATAATATATCACACTTTTATGAAAACCACACTCAGAATATTATAA
TCTATAAAAAGAAACCAAAATTGCTTAATCACCCCTCTTAAAATAATGAA
TTATTTCATAAAGAATAGTCCGTAATCAATATACCAATTGATCAATTGAT
TATTATAATTCATTCTATATTTTACTGTCCAAAGTTAGGAATAACGGATG
TAGGATTAGGATCAGAACCAGGCATTGCATATTTTGGTCGGCAAGTGCAG
CCACTCTCAACTAAAACATAGTCTTGCCCTGTCAATGTAACGGGACCAAG
TGGGATCACGAGGAATAGATATGGGATATACGTTTGAATGCACTCCCCAT
GCAG
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