EMLSAT00000000606, EMLSAT00000000606-696453 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000606
Unique NameEMLSAT00000000606-696453
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:446994..450007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000606 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000606EMLSAG00000000606-683372Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002629EMLSAE00000002629-711557Lepeophtheirus salmonisexon
EMLSAE00000002630EMLSAE00000002630-711558Lepeophtheirus salmonisexon
EMLSAE00000002631EMLSAE00000002631-711559Lepeophtheirus salmonisexon
EMLSAE00000002632EMLSAE00000002632-711560Lepeophtheirus salmonisexon
EMLSAE00000002633EMLSAE00000002633-711561Lepeophtheirus salmonisexon
EMLSAE00000002634EMLSAE00000002634-711562Lepeophtheirus salmonisexon
EMLSAE00000002635EMLSAE00000002635-711563Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777769auto777769Lepeophtheirus salmonispolypeptide
EMLSAP00000000606EMLSAP00000000606Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000606

>EMLSAP00000000606 ID=EMLSAP00000000606|Name=EMLSAP00000000606|organism=Lepeophtheirus salmonis|type=polypeptide|length=395bp
MSIYSQIINLPPLLRTKYFNRKDVLXREAKNQRLTNTFVNRFLPEEIYEN
SNSDDDIEIVNHAWKTVIDGNWQNIDSNILLFKKEISKLFKKHKILIERA
KKESSIFVTTIASTSLDTYKKYNFDLVCIDEAGFVSQGNSLLHILRAPRI
ILCGDHCQLPPITFNPDSALEGYEISAMEKLTKLLPNCVSFLSIQYRSNQ
IISEWSSRYIYYNKLRTSSTVANITLQDLIPHQNSELNRPFVFIDTKGQG
YHEEQDEGSEFMTDADKSIVNLNEAFLVEIIVNKYIELGVSPKVISVLRS
LIWKSDHLRDISIYTVDSFQGKEKEMIIISFVRSNPYGEIGFLRETRRIN
VSVTRARRCVIIVGDSETLCHDPALKDLVDFCSDNELIVGSDTIF
back to top

mRNA from alignment at LSalAtl2s109:446994..450007+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000606-696453 ID=EMLSAT00000000606-696453|Name=EMLSAT00000000606|organism=Lepeophtheirus salmonis|type=mRNA|length=3014bp|location=Sequence derived from alignment at LSalAtl2s109:446994..450007+ (Lepeophtheirus salmonis)
TAATTGATAATAATAAACATTCAATTCCACATTTGACTTGATTTGAAGTT
GCATTGGGGTTGACAAATTCCGTTTGTTAATTTGATGTATGCAAAAAACT
AAAAAAGTACTTGAAACTTCTAACTAGCATCAAAATGTATAGAAGATCCC
TCCTTCGATGGATTAGATTCCCAAGATCTTTTGGAAATCAGTACTCATCT
AGTACCTCCGTAGCTGAATCTCATTTTACACGAGTACAAGACTATGTGGA
CTATAATATTCGAATGACTCAATTGGAAATGATTGAAGTTGCTTCATTTA
ACAATTAACAGATGTGGCCTGTCAACACAAAAGCAAGCTAGAATGATTTT
TCTGAAAATTGATCATCACAATAATAAAGAATGAGAAATGGAAGGATTTT
AATTTTTATGGTTGAAAGGGGTCATATCGGAGCCAAAATAAGTCTCTTAT
ATCAAATAAAGGTCCTAAACACTAGCTAAAATTCTTGGATATCTTTACTC
ATTCCAGTAATTTGAATAGTACGCCTATAATTGACTCAAATATATAAAAA
ATAAATTGGGATTTTCTCCCTTTCTTGATTTTTGTTCAAGATTGTTTTTA
TGTTGGCACGCCACAGATGTTGAATATATTCCCTCACTCCACTCTTTTTA
GAAACTTGGTCTGGAAGAGAAAGTTAAGCAAAGTCTAACTCGAACTGAAT
TGGAAGTTCGGGGTTTAGCATTGTTTGGACTACTCATTTGTCCGAAAACT
CCGGTTTCCATTACGCAAGGTGAGTATTAATGTATTTATTGCTTGATCTC
TTAACTTATGTTCCCCCCTTTCTACTAGATGGAAGTGTTCAGATACATTT
AGTCAAATTGGAAACTAATAATTTTGATTTTAAAAGAGTATTTCGAAAAG
GAAAATTGGTCACCCTCAATCTGGATCCCAAAGGTTCAACCAAAAATCAA
GTAGATCATTTATATCTGTTTTGTAACTTGTATACCAAAAATATGATCAT
TTTAAACATTCCAGTATTCCTTTGAAAAATTATCATCAACCGATCCGGCT
TCAGCATTCAATGCTATCATTGAAGATATTTTTGACGAAAATATAATATT
AAATATTTCCTCTTTCGATGCTACTAACCCAAATTTCATTCAAACAATTC
GATCTTTATCATCAAAACATTCAACCTTTGTATTTCTTACAAAGCGCTCT
GAAAAATACTTATTCAAATCATCTATTCAAAGGCTTAAAAAAATTCGTAG
ATGGAAGGAATTGCGACAAGGAACTAATAATGGCATTCATATTGTATCAA
GTCTGAGTGACGATGATTCACTTACGGATTTTGAACTTAAAAGTACAAAA
AACCACAATAATACCTTGGAGTTGAGTGACTATTTGGATGATTCAAAACT
TGAAACATTGAATCATGCTTCCAAATGTCCACCTTTACATCTGATTCATG
GTCCTCCAGGAACAGGGAAAACAACTTCACTTGCATCCATAGTCATATCA
GCTGTTGCTAATGATGAAAGGGTACTCGCCCTAGCACCCTCACACGCCGC
TTGTGATGCACTCACCATGTCTATTTATTCTCAAATAATAAACCTTCCTC
CTCTGTTGAGAACGAAATACTTTAATCGGAAGGATGTGTTGGMGAGAGAG
GCTAAAAAYCAGAGACTGACGAATACATTTGTCAATAGATTTCTTCCAGA
AGAAATTTATGAAAATTCAAACTCTGATGACGATATAGTAAAATGTTTAT
TAATGTTCTTACATATTTTTATAATGATATATTGTATACTTTTTTAGGAA
ATTGTCAATCATGCATGGAAAACGGTAATTGATGGAAATTGGCAAAATAT
AGATTCAAATATTTTATTGTTTAAAAAAGAAATATCCAAGCTTTTTAAAA
AACACAAAATATTGATTGAAAGAGCAAAAAAGGAATCCTCCATTTTCGTC
ACAACCATAGCTTCCACTTCTCTTGATACTTATAAAAAGTATAACTTTGA
TTTGGTTTGTATTGATGAGGCGGGTTTTGTATCACAAGGAAATTCTTTAT
TACATGTAAGATTCATTTATTCTCGTGACTCTCAAAATGAAATTGCCAGA
TTTAGGGAATCACGGAGATGGATTCTTTTTTCATTTGTGGCATTTTTTTC
TTAAATTAATGTTATTATATGCAGATATTACGGGCTCCAAGAATAATCTT
ATGTGGGGATCATTGTCAGTTACCTCCAATTACTTTTAATCCTGATAGTG
CTCTTGAGGGATATGAAATCTCTGCGATGGAAAAGTTAACAAAATTGCTG
CCAAACTGCGTCTCATTTTTGTCTATACAGTATCGTTCAAACCAAATTAT
TAGCGAATGGAGCTCAAGATATATTTACTATAACAAACTCCGTACGTCAA
GTACGGTAGCTAACATTACATTACAAGATCTTATACCACATCAGAATTCA
GAACTGAATCGTCCCTTCGTGTTCATTGATACAAAAGGTCAAGGTTATCA
CGAAGAACAAGACGAGGGCTCTGAGTTTATGACGGATGCCGACAAATCCA
TTGTTAATTTAAATGAAGCTTTTTTAGTGGAGATTATTGTTAACAAATAC
ATTGAACTAGGAGTGTCCCCTAAGGTAAGTGTTTATCGATTGCAAAAAGC
CTTAGATACATTAATTATTTTTAGGACATGGGGATTATAAGNCCCCTATT
GGTCTCAAGTATCTGTTTTGAGGTCATTGATATGGAAAAGCGATCATCTT
CGAGACATAAGTATTTATACCGTGGATAGTTTTCAAGGAAAGGAAAAAGA
AATGATAATTATAAGTTTTGTTCGATCTAATCCCTATGGCGAAATCGGTT
TTCTTAGAGAAACACGGAGGATTAATGTCTCAGTGACACGAGCCAGACGC
TGCGTCATTATTGTCGGAGACTCTGAAACGCTATGTCATGATCCTGCTCT
TAAAGACTTGGTTGATTTTTGTTCGGATAATGAGCTGATTGTGGGGTCAG
ATACAATATTTTGA
back to top
Add to Basket