EMLSAT00000000607, EMLSAT00000000607-696454 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000607
Unique NameEMLSAT00000000607-696454
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:450172..456436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000607 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000607EMLSAG00000000607-683373Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002636EMLSAE00000002636-711564Lepeophtheirus salmonisexon
EMLSAE00000002637EMLSAE00000002637-711565Lepeophtheirus salmonisexon
EMLSAE00000002638EMLSAE00000002638-711566Lepeophtheirus salmonisexon
EMLSAE00000002639EMLSAE00000002639-711567Lepeophtheirus salmonisexon
EMLSAE00000002640EMLSAE00000002640-711568Lepeophtheirus salmonisexon
EMLSAE00000002641EMLSAE00000002641-711569Lepeophtheirus salmonisexon
EMLSAE00000002642EMLSAE00000002642-711570Lepeophtheirus salmonisexon
EMLSAE00000002643EMLSAE00000002643-711571Lepeophtheirus salmonisexon
EMLSAE00000002644EMLSAE00000002644-711572Lepeophtheirus salmonisexon
EMLSAE00000002645EMLSAE00000002645-711573Lepeophtheirus salmonisexon
EMLSAE00000002646EMLSAE00000002646-711574Lepeophtheirus salmonisexon
EMLSAE00000002647EMLSAE00000002647-711575Lepeophtheirus salmonisexon
EMLSAE00000002648EMLSAE00000002648-711576Lepeophtheirus salmonisexon
EMLSAE00000002649EMLSAE00000002649-711577Lepeophtheirus salmonisexon
EMLSAE00000002650EMLSAE00000002650-711578Lepeophtheirus salmonisexon
EMLSAE00000002651EMLSAE00000002651-711579Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777794auto777794Lepeophtheirus salmonispolypeptide
EMLSAP00000000607EMLSAP00000000607Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000607

>EMLSAP00000000607 ID=EMLSAP00000000607|Name=EMLSAP00000000607|organism=Lepeophtheirus salmonis|type=polypeptide|length=1592bp
MGGGRKKDRTKGSTKPSSSARSAELLENSSGLIGFGENNNSSSSILESFV
FGEDVPSEFRVVFKKMTKKDEVTRLKAVGEFNELMEETGTVHVTKIIPYW
PRMYSKIANDHDRRIRTAAQQAHLNVVKHAGREIAPQLKSLASTWFISCS
DPHAPAASLAFKSFSVAFPTDKKLTDAIRFCLTEIIMVLDENLLNSSIQS
FKDVNLSAEESENKYFRVVSSSLLAYASLLDYINVEFFQKIKPNQDRILE
SIKFWKYSKNKNTMIRSSWFKLICKMGEKTSELSIFQEFEYNKLIDITFT
NLQETDPIIAPIIWDCCLYIMLNYANWKDSVNVSSTVLPNLLQCFENGCS
GNGVDIYPKLLPFLSCLLKEKIPTGSVLKEILCSLRHPYASLKKKQLNAL
MKSYFELSRYFEKISQKKDIDAKNLVVEDVFIWFEMILIDEEVDSISSDF
FTNFLGSYLLYNQSSSYWIKVSEMIKKALSNNRFTSLKTFPXGPAMRFDS
SEVNKLGSEICRYCLFENNWDNGARELVTFIICSFGMENNFFEYLMKGYE
VCPGRSGVFNFIKKLSLMNKTQITADFIVFASTFLSQPEEILEFHSSIIC
YESQEEKEWFSLLMLSMTHISDEQIRPSLFKMDLFEKIFISSIQWTIESI
INRTQRNCENIWSMIKEVCFKFGKHMSEDLLGNIVTKFLKYIDALYQSQA
KDQDISQKGSALVFVSSILETVVLVEDGEVFNQLEVYKELLLSLLRIICN
KNSILSDDVHKKVMSSWEVIFKNFLNKESSNTFVVDAFLEDVCKSIKDFL
LNLGEITHLTEVAMLILSHITQTQRVRVINKIAYIDTKHVSNDFPSKELL
FERKIFPVKVLEMDFIDFENEHSGRKCYLEFFRGLSEEMCSIVGSGCIDE
EFVYNLAHLIHYERSLMFDDQGPSCEKTHWKNIFNALSNTEQLKLFNYIM
EMSRTKGGVWSLVLDTVNEYSDHSFILTFEKSNQIDLNHREILSQLLTKD
KLREICSELSENISNLEVKNIIDDIVLASRLISSVDEFKKFADICFDAIK
VKRDEVDFLFSCDISEMNWNQMLPTLAVMEFFDSYLEVVESRSYSIDPER
WVFLLCFTSSWIQTIDESRNCFSTKVEVQRFALPLFRLLEKIGMAMNKLS
DEVDYKNLKEEWKEFFAGGMYDILLRLFVTISYDEIHHEVTNALNCALKH
IPLEILHEGAGLPPKFCEEDVESANEHLPDNYIFLLNHLGPLVLSSNASI
QMTAAHLLLRLMSKISELESAKNEREDAKKLPHRIIYLLNYTEPIVKNIF
EGFQFGETVTINDAVDKTVTTYLRAYLHTCRLVLQLISSANQELRPSWTE
FIRERNFLDSLVPVLFSLMRIDEPAPREYSEFYFIEIHNIAFHIYHDLLK
CLPAMFRQWWNLTDNRISGIIEKFTINSISPLLWEEESQNIISSKTTFKN
MTVGVRXSVREXXAVYSLDEGSMDLIISLPNNFPLGTVKVDRNQRIGVGH
NQWRNWMLQLTTFLQHQNGSILEGLIIWKNNVDKRFEGVEECCICFYILH
GANHQLPKLSCRTCKKKFHSACLYKWFSTSNNSTCPMCRNLF
back to top

mRNA from alignment at LSalAtl2s109:450172..456436-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000607-696454 ID=EMLSAT00000000607-696454|Name=EMLSAT00000000607|organism=Lepeophtheirus salmonis|type=mRNA|length=6265bp|location=Sequence derived from alignment at LSalAtl2s109:450172..456436- (Lepeophtheirus salmonis)
ATGGGTGGTGGGAGGAAAAAAGATCGAACTAAGGGAAGCACAAAGGTAAT
GATTCTAGTATTTTGAGTGGGATATGAAAATAGTTTACTTGGTTTTTCAG
TAGTGTTTTGATCATTTCTGATGCTGGCATCGAAATTGTAATTCATGCTT
TAATTATTGCGTATTGGGATATGGGTTTATGCGGGCAATAGATTGTAAAA
GTCTTGCAAGATTCTATATAAATAATAAATATATATTCTATTCAAATAAC
GAGTATTAATACTACTTTATCTTTCGAATCATTTAGCCATCTAGCAGCGC
TAGAAGCGCTGAACTCTTGGAAAATTCCTCTGGATTAATAGGTTTTGGAG
AAAATAATAATTCCAGTAGTTCAATTCTAGAATCTTTTGTGTTTGGGGAG
GATGTGCCGAGCGAATTCAGAGTTGTTTTTAAAAAAATGACAAAAAAAGA
TGAAGTGACTCGTCTTAAAGCTGTAGGAGAATTCAATGAGCTTATGGAAG
AAACTGGAACGGTCCATGTCACAAAAATTATCCCTTATTGGCCAAGAATG
TACTCCAAAATTGCTAATGATCACGATAGACGTATACGAACAGCCGCTCA
ACAAGCACATTTAAATGGTGATGCTCTTATTGAATAAAACTTTTTTTATA
TTTCATATTTGTATTTTGCAGTTGTTAAACACGCTGGCAGAGAAATTGCT
CCTCAGTTGAAATCCTTAGCGTCTACTTGGTTCATTTCCTGCTCGGATCC
CCATGCGCCCGCTGCATCTCTTGCATTTAAATCCTTTTCAGTTGCATTCC
CTACAGATAAAAAGCTGACTGATGCTATAAGATTTTGTTTGACGGAAATT
ATTATGGTTTTAGATGAAAATCTTTTAAATTCCTCCATTCAATCTTTTAA
AGATGTCAAGTGAGATCGATTTATTTCAGTTCTTAGTCTCTAATGGATTA
TATATAACTCACATTTATTCTACAGTTTAAGCGCCGAAGAATCAGAAAAT
AAATACTTTCGAGTTGTTTCATCCTCTTTGTTGGCTTATGCATCCCTTTT
GGACTATATCAATGTTGAATTTTTCCAGAAAATTAAACCTAATCAGGATA
GAATTTTAGAATCCATCAAATTTTGGAAATATTCAAAAAATAAAAATACG
ATGGTAATAAGATCTTTCAGAGMTTTATGAACAATATTTGCATATGTTTC
TATGATAACCTATGGCCATTTTTTTATTATACAGATTAGATCTTCATGGT
TTAAACTTATTTGTAAGATGGGAGAAAAAACTTCAGAGTTGTCAATTTTC
CAAGAGTTCGAGTACAATAAATTGATAGATATTACATTTACAAATTTACA
AGAGACAGATCCAATTATCGCTCCAATCATATGGGATTGCTGCTTGTATA
TTATGTTAAACTATGCAAACTGGAAGGATTCTGTAAACGTATCTTCAACC
GTGTTACCAAACCTATTGCAATGTTTTGAGAATGGATGTTCAGGAAATGG
CGTCGACATTTATCCAAAGTTGTTACCCTTCCTAAGTTGTCTCTTAAAAG
AAAAGATACCAACTGGAAGTGTACTGAAAGAGATCTTGTGCTCCTTGAGA
CATCCTTATGCATCCTTGAAGAAAAAGCAATTAAATGCATTGATGAAATC
CTATTTTGAGTTATCTCGATATTTTGAAAAAATATCACAGAAAAAGGACA
TTGACGCTAAAAATTTAGTTGTAGAGGATGTAAGTTATTTTTAAGCATGA
TATTTCATTTCAAATTTATATAAATCATTATTTTATAGGTATTTATATGG
TTTGAAATGATATTAATTGATGAGGAAGTTGACTCTATTTCATCAGATTT
TTTTACTAACTTTTTGGGCTCTTATCTTTTATATAATCAATCTTCAAGCT
ATTGGATCAAAGTGTCTGAAATGATTAAAAAAGCTTTAAGCAATAATAGA
TTCACATCTTTAAAAACAGTAATGGAGGCATTCCTGGGAATTCAGAGTTC
TAAAAACAATAATAAAAGAATTACTTTCAGTCAAACTTCAAATGAAGTTT
CCANGTGGTCCAGCAATGAGATTTGATTCTTCAGAAGTCAATAAATTAGG
ATCAGAGATTTGTCGGTATTGTCTATTTGAAAATAATTGGGATAATGGAG
CTCGTGAGCTCGTTACTTTTATAATTTGTTCATTTGGAATGGAAAATAAC
TTTTTTGAATATCTTATGAAAGGCTATGAAGTTTGTCCAGGTCGTTCTGG
AGTCTTTAATTTCATTAAAAAACTTTCTCTTATGAATAAAACGCAAATCA
CGGCCGATTTTATAGTATTTGCCTCTACCTTTTTATCACAACCAGAAGAA
ATACTGGAGTTCCACTCTTCGATTATTTGTTATGAATCACAAGAAGAGAA
AGAATGGTTTTCATTACTAATGCTCAGCATGACCCATATTTCTGATGAGC
AAATAAGGCCTTCTCTCTTCAAAATGGATTTATTTGAGAAAATTTTTATT
TCATCTATTCAGTGGACTATAGAGTCTATAATTAATAGAACTCAAAGAAA
CTGCGAAAATATTTGGTCAATGATAAAAGAAGTCTGTTTTAAATTCGGTA
CGTTTCTTTGATTTTATTCTTATGTACGAAGTTTTCCCATTTTCCCCCAT
ACTTTTTTAAACTACAGGGAAACATATGTCAGAAGATTTACTTGGAAATA
TTGTGACGAAGTTTCTTAAATATATTGATGCACTATATCAAAGCCAAGCC
AAGGATCAAGATATTTCTCAGAAAGGATCTGCTCTTGTTTTTGTGAGTAG
TATCCTTGAAACAGTGGTTCTTGTAGAGGATGGAGAAGTTTTTAATCAAT
TGGAAGTTTATAAAGAATTACTGTTATCGCTACTTCGAATCATTTGTAAT
AAGAATTCCATTCTTTCAGGTACGTATGCGATTTGAGGTTGAGCTATGTT
TATACTTTGTTAATTAATATATTTTTATACCAATGTAGATGATGTTCATA
AAAAAGTGATGAGTTCATGGGAAGTCATTTTTAAAAACTTTTTAAATAAG
GAGTCCTCTAATACCTTTGTTGTTGATGCTTTTTTGGAAGATGTGTGTAA
AAGTATCAAAGATTTCTTACTCAACTTGGGGGAAATAACTCATCTCACTG
AGGTTGCAATGTTAATTTTATCCCATATTACTCAGACGCAAAGGGTCAGA
GTAATAAATAAAATTGCTTATATTGATACAAAACATGTATCAAATGATTT
CCCTTCCAAGGAATTGCTTTTTGAAAGAAAAATATTCCCTGTAAAAGTAT
TGGAAATGGATTTTATTGATTTTGAAAATGAACATTCGGGAAGAAAATGT
TATTTAGAATTTTTTCGGGGACTGAGTGAGGAAATGTGCTCAATTGTTGG
AAGTGGATGTATTGATGAAGAATTTGTTTACAATTTGGCTCATTTGATAC
ATTATGAGCGTTCTCTTATGTTCGATGATCAGGGGCCATCTTGTGAAAAA
ACTCATTGGAAGAACATTTTTAATGCATTATCCAACACTGAACAATTAAA
ACTTTTTAATTATATTATGGAAATGTCTCGAACTAAAGGAGGTGTTTGGT
CATTGGTACTTGATACAGTTAATGAGTATTCTGACCACTCCTTTATTCTT
ACATTTGAGAAATCAAATCAAATAGATTTAAATCATAGAGAAGTAAGTGA
GAATAATATCTTAATTTTGGAAGCATAAAATTAATTTTCTTTCATTAATA
TTTAGATACTTTCTCAACTGTTGACTAAAGATAAGCTCAGAGAAATATGC
TCAGAGCTCTCTGAAAATATATCAAATCTGGAGGTTAAGAATATCATTGA
TGATATTGTATTGGCGTCTCGTTTAATTTCATCAGTAGATGAATTCAAAA
AGTTTGCTGATATTTGTTTCGATGCGATTAAAGTTAAAAGAGATGAGGTT
GATTTCCTATTTTCCTGGTAATATTTCGTTTAATTTTGAAGGATATCCTT
ATTATTTTTGTTTCCCCCATAGCGATATCTCGGAGATGAATTGGAATCAA
ATGCTCCCAACTCTTGCCGTTATGGAATTTTTTGATAGCTATTTAGAAGT
AGTAGAATCTCGCTCTTATTCTATTGATCCGGAACGTTGGGTATTCCTTC
TATGTTTTACAAGTTCATGGATTCAAACTATTGATGAGAGTAGGAACTGT
TTTAGCACTAAAGTTGAGGTAAAGTAACAATTACATAAATTGTAAATAAT
TAAAGCTTTTATATATAATTTATTTTGTTTAAATAGGTCCAACGGTTTGC
TTTACCTCTTTTTAGACTTTTAGAAAAGATTGGAATGGCCATGAATAAAT
TATCTGACGAGGTTGATTACAAAAATCTAAAGGAGGAATGGAAAGAATTT
TTTGCGGGTGGGATGTATGACATATTACTTCGATTGTTTGTAACGATATC
CTACGATGAGATTCATCACGAAGTCACAAATGCGCTTAATTGTGCCCTAA
AACATATTCCATTAGAGATACTGCACGAAGGAGCCGGACTACCTCCTAAA
TTTTGTGAAGAGGATGTAGAATCTGCTAATGAACATCTTCCTGACAATTA
CATTTTTCTTTTAAATCATCTTGGGCCTCTCGTACTGTCTTCCAACGCCA
GTATTCAAATGACTGCAGCTCATTTATTGCTTAGGTAATTATTATGGTGA
TTTGGTCATAGTTACTACTATATTTTGTCATTGACTTTTCCAGATTGATG
AGTAAGATTTCGGAGTTAGAGTCTGCCAAAAATGAAAGAGAGGACGCAAA
AAAACTTCCTCATAGAATCATTTACCTACTTAACTACACGGAACCCATTG
TAAAAAATATTTTTGAAGGATTTCAATTTGGAGAAACTGTAACAATCAAC
GATGCTGTAGATAAAACTGTGACTACTTATTTAAGGGCATATCTCCATAC
TTGTCGATTAGTTTTACAATTAATATCATCAGCTAATCAAGAACTACGCC
CTTCTTGGACTGAATTTATTCGTGAAAGAAACTTTTTGGATTCCCTGGTT
CCTGTTTTATTCAGCCTTATGAGAATAGATGAACCTGCCCCCCGCGAATA
TTCAGAGTTTTATTTTATAGAAATTCACAATATTGCCTTTCACATTTATC
ATGATCTCTTGAAATGTCTACCTGCTATGGTAAGTGATTAATATGTATTC
TTTCATTGTTTAATGAATCTGATCATTGTTATTTGCACAGTTCCGACAAT
GGTGGAATTTGACAGACAATCGTATATCGGGGATTATAGAAAAGTTTACT
ATTAACTCCATTTCCCCATTATTATGGGAAGAGGAGTCTCAAAATATCAT
CTCATCTAAAACTACATTTAAAAATATGACTGTGAGTATTCTTCTAATTT
AAAAACAGTTTTATTTATTGGAATTATAAGTAATTTGTTTGATCCTGAAC
TACCTAAAAAAATGCGTATTTCTTATACATCGAGTATCTATAAATGCAGT
TATCCATTTTTAAAATGGGAAAAGCCACGGATGCTAATATTCTATACATA
ATTGGTGAGGGGGTTTTAGAGGTTGAGTACCAGAGGGACTTTCCTCTGAC
CTTTCGCCTAATAGTAATACGATGCCTTATTTCAATGTGGAGCCTGATAG
GGGGGGGGGGGATATATCTACTAATTGTAGATGTGAATATTTTATTAATA
AGGCGGATAATCCGTAGATATGAATATTCGATGCTGCATCACCAGTGCAT
ATATAGGTATTTAATATTTTTTAAGGTTGGTGTGAGGMCCTCAGTCAGAG
AAKTTKTAGCCGTATATTCGTTGGATGAAGGAAGTATGGACTTGATAATA
TCCTTGCCTAATAATTTTCCATTAGGGACTGTTAAAGTCGATAGGAATCA
AAGAATTGGAGTTGGTCATAATCAGTGGAGAAATTGGATGTTACAACTAA
CAACTTTCTTGCAGGTATCTTGTACATTATAAGAGACATACTCGTACATT
ATTATATTCATAATTGGTTTTATATTTATAGCATCAAAATGGTTCAATTT
TGGAAGGTTTAATTATATGGAAAAATAATGTGGACAAAAGATTCGAAGGA
GTTGAAGAGTGCTGTATTTGTTTTTATATTCTTCATGGTGCTAATCACCA
ATTACCCAAACTGTCTTGCCGTACTTGTAAGAAAAAGTTTCATTCTGCGT
GTTTGTACAAATGGTTTTCTACGAGTAATAATTCAACTTGTCCAATGTGC
AGAAATTTGTTTTAA
back to top
Add to Basket