EMLSAT00000000620, EMLSAT00000000620-696467 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000620
Unique NameEMLSAT00000000620-696467
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:659327..660546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000620 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000620EMLSAG00000000620-683386Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002695EMLSAE00000002695-711623Lepeophtheirus salmonisexon
EMLSAE00000002696EMLSAE00000002696-711624Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779177auto779177Lepeophtheirus salmonispolypeptide
EMLSAP00000000620EMLSAP00000000620Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000620

>EMLSAP00000000620 ID=EMLSAP00000000620|Name=EMLSAP00000000620|organism=Lepeophtheirus salmonis|type=polypeptide|length=377bp
MSSFGCATLAPNFLNRNVLLIGKHLTFVRHSKKQKQLKDEIRSTHLHLRT
LISKKELTPSERALSYFNVYYKKFYGPNWHSIRLGLLSRPKHVALINNFG
DSMETELQLSYLGCSNIFPEYQIPIQSDSSEEEPLGVSHGKPSLANPEVE
KSEEDVILDELGSMEMDQIEERLIFPNQKISRTGESFESMYEFVPVSELK
GMDDFVEESSHYEAYSKVSSQSEFPLQFWKEHFHFRPTLKAFSFPQGDIS
RFPQPSPDIHKNYNYYCLDGSSLLPVLALNIQEGNTVLDLCSGPGGKALA
ISQTLLPSKLVCNDSSRSRLNTVQNVFNQYVGSSGLDLDIDFTCSDGEDF
FVDYESSFDRVICDVPCSTDRVVVQKK
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mRNA from alignment at LSalAtl2s109:659327..660546-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000620-696467 ID=EMLSAT00000000620-696467|Name=EMLSAT00000000620|organism=Lepeophtheirus salmonis|type=mRNA|length=1220bp|location=Sequence derived from alignment at LSalAtl2s109:659327..660546- (Lepeophtheirus salmonis)
ATGAGCTCATTTGGATGTGCAACCCTAGCTCCCAATTTTCTCAATAGAAA
CGTCCTTTTGATCGGGAAACACCTTACTTTTGTCCGACACAGTAAGAAAC
AAAAACAGCTAAAGGTAAATTTCAAATTTGGATTTCAGTTTCACCCATTC
GGCAGTCATCCTTAACCTTTGAAATCAATACCAATTTTATATTTTTCTAG
GACGAAATCCGCTCAACCCATCTGCATTTAAGGACCCTCATTTCTAAAAA
GGAGTTAACTCCTTCAGAGCGAGCACTTAGTTATTTCAATGTTTACTATA
AGAAATTCTATGGTCCAAACTGGCATTCCATTCGACTGGGACTTTTATCA
AGACCCAAGCACGTTGCGCTCATTAACAATTTTGGAGACTCTATGGAAAC
TGAGTTGCAACTCTCCTATTTGGGCTGCTCCAACATATTTCCCGAATATC
AAATTCCAATCCAATCTGATTCTTCTGAGGAGGAGCCTTTAGGTGTAAGT
CATGGAAAACCTTCCCTCGCAAATCCTGAAGTCGAAAAAAGTGAGGAGGA
TGTTATTCTTGATGAATTAGGCTCTATGGAGATGGACCAGATAGAGGAAA
GACTAATATTTCCAAACCAAAAAATATCTCGTACAGGGGAGTCCTTCGAG
TCAATGTATGAGTTTGTACCTGTGAGTGAATTAAAAGGAATGGATGATTT
TGTGGAAGAGTCCAGTCACTATGAGGCTTACTCAAAAGTGTCAAGTCAAA
GTGAATTTCCTTTACAATTTTGGAAAGAACATTTTCATTTTAGACCCACT
CTGAAGGCTTTTTCATTTCCTCAAGGTGATATTAGTCGATTTCCACAGCC
TAGTCCGGATATACATAAGAATTATAACTATTATTGTCTGGATGGCTCCT
CTTTACTACCTGTCCTTGCTTTAAATATACAAGAAGGGAATACAGTTCTC
GATCTTTGCTCGGGTCCTGGTGGCAAGGCTCTTGCCATTTCTCAAACACT
TCTTCCCTCTAAGCTTGTGTGCAATGATTCATCAAGGAGCAGACTAAATA
CAGTACAGAACGTTTTTAATCAATACGTTGGCTCTTCTGGACTTGATCTA
GATATTGATTTTACGTGCAGTGATGGTGAAGACTTTTTTGTAGACTACGA
GTCTTCTTTTGACAGAGTAATTTGTGACGTCCCTTGTTCCACGGATCGAG
TGGTTGTACAAAAAAAATGA
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