EMLSAT00000000636, EMLSAT00000000636-696483 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000636
Unique NameEMLSAT00000000636-696483
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:99603..101216 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000636 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000636EMLSAG00000000636-683402Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002786EMLSAE00000002786-711714Lepeophtheirus salmonisexon
EMLSAE00000002787EMLSAE00000002787-711715Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772132auto772132Lepeophtheirus salmonispolypeptide
EMLSAP00000000636EMLSAP00000000636Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000636

>EMLSAP00000000636 ID=EMLSAP00000000636|Name=EMLSAP00000000636|organism=Lepeophtheirus salmonis|type=polypeptide|length=400bp
MPFLSKDWRGPGEEWVRYQGGWEMKKCFQSVKTEKXSSLTSDIPVAPTAA
SDPTPSKCHVKRLLRIFEMKLANNSFKRAPSVDEEDYEEIQEETQKTTLD
EEEDERDKIEEVKVICPSYPVVVKCTKEIAGFNELAEGILRLDFPGALRD
VRRFRYVARVVHILLRHDKLRTLSGAAQKLLFRLLEEMAXVVYEXQSHED
VLHSLLQELHSTMAIYNVWGSHLGSARLFQEHVERRRKITEFVERMQDRY
KQDLMPCSLDHPNLVQILPEECVREVLLRLSDKKDLTNASRTCIVMESIV
KEKRIWRELVQAHFTKPQIECLLKQHPNFKESGDWKSLYDSLRKKWDPKE
TFGDLLYLCRSCCSLYWRSLEHICQLELAEREVTEDVPIMPNTFLSFFSV
back to top

mRNA from alignment at LSalAtl2s109:99603..101216-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000636-696483 ID=EMLSAT00000000636-696483|Name=EMLSAT00000000636|organism=Lepeophtheirus salmonis|type=mRNA|length=1614bp|location=Sequence derived from alignment at LSalAtl2s109:99603..101216- (Lepeophtheirus salmonis)
ATGCCTGGAAGAAGGGACGAAGACTTCTACACCTAGTACCTAAATATTAA TTATTATATAAAGAAATGCGCAGACGCAATGCAAAGAGCAAGAAACTGCT TAGTGCTTTAACGCAACGCAATTTACTTACCTCTTATACTTTGTAGTATT GTACTGAAAACCGAGAATATTGAGAGAAAGAGTGAGCGGATCGGCGAATG GAGGATGTTGGCAACAAAGAGAGAATAAATACGCTGACTTCTACATATTA TGTAACAAATACTCATTCATACGGCAGCATTCCATATTTTTTGTATATTC TCACAAAGAACTTTGGAAATAAATAAGAAGAGTCAAAAGTACTTTATTTA GTCAAAGGATTTTTATTAAAAAATAAAAATCTATATTTTAGCTGTGATTT TCTAAAGGAGGATGCCTTTTTTGTCCAAGGATTGGAGAGGCCCAGGAGAG GAATGGGTTCGTTATCAAGGAGGATGGGAAATGAAAAAGTGTTTTCAAAG TGTCAAAACTGAAAAAAASTCATCCCTGACATCTGATATCCCTGTTGCGC CTACAGCTGCCTCTGATCCGACTCCCTCAAAATGTCACGTCAAAAGACTT CTACGGATTTTTGAAATGAAATTGGCCAACAATTCCTTCAAACGTGCTCC AAGTGTAGACGAAGAGGACTATGAAGAAATCCAAGAGGAAACTCAGAAAA CAACTCTGGATGAGGAGGAAGATGAAAGAGATAAAATCGAGGAGGTGAAA GTCATTTGTCCCTCTTATCCCGTCGTGGTAAAATGCACAAAGGAAATTGC TGGGTTTAATGAACTCGCTGAAGGGATTTTGCGTTTGGACTTTCCTGGAG CTCTAAGAGATGTTAGAAGATTTCGCTATGTTGCTCGTGTCGTGCATATT CTACTACGCCATGATAAACTAAGGACTCTCTCTGGTGCGGCTCAGAAGCT TCTCTTTCGTTTATTGGAAGAAATGGCGGRTGTCGTCTATGAAAAWCAAT CTCATGAAGATGTTTTGCATTCTTTACTCCAAGAGCTTCATTCTACAATG GCAATATATAATGTTTGGGGCAGTCATTTGGGGAGTGCACGTCTTTTTCA GGAGCACGTTGAGCGAAGACGGAAAATTACAGAGTTTGTTGAGAGAATGC AGGATCGTTACAAACAGGACTTGATGCCCTGTTCTTTGGATCACCCAAAT TTGGTACAAATTCTTCCAGAGGAATGTGTTCGTGAAGTTCTTTTACGACT ATCCGACAAAAAAGACCTTACAAATGCATCAAGAACCTGTATTGTCATGG AGTCCATTGTTAAGGAAAAAAGAATATGGCGAGAACTCGTACAAGCTCAT TTTACAAAGCCTCAAATTGAATGCCTTCTTAAACAGCACCCTAATTTCAA GGAAAGTGGAGATTGGAAATCTCTTTACGATTCACTCAGGAAAAAGTGGG ATCCCAAAGAGACTTTTGGGGATCTCCTTTATCTTTGTAGGAGTTGCTGT TCTCTGTATTGGCGCTCTCTTGAGCATATTTGTCAACTTGAACTTGCGGA GCGCGAAGTCACAGAAGACGTTCCAATTATGCCAAACACTTTTCTTTCTT TCTTTTCTGTTTAA
back to top
Add to Basket