EMLSAT00000000639, EMLSAT00000000639-696486 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000639
Unique NameEMLSAT00000000639-696486
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s10supercontigLSalAtl2s10:1149018..1149757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000639 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000639EMLSAG00000000639-683405Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002792EMLSAE00000002792-711720Lepeophtheirus salmonisexon
EMLSAE00000002793EMLSAE00000002793-711721Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780469auto780469Lepeophtheirus salmonispolypeptide
EMLSAP00000000639EMLSAP00000000639Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000639

>EMLSAP00000000639 ID=EMLSAP00000000639|Name=EMLSAP00000000639|organism=Lepeophtheirus salmonis|type=polypeptide|length=211bp
FVSDGVFKAELNEFLTRELAEDGYSGVEVRVAPLRTEIIIMATRTQNVLG
DKGRRIRELTSVVQKRFSFPENSVELYAEKVAARGLCAIAXAESLRYKLI
GGLAVRRACYGVLRYIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS
GDPCVLGIKVKIMLPFDVTGKSGPRKPLPDTVSVAEPKEEDXPANPFSEP
KAAKPEAQVVM
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mRNA from alignment at LSalAtl2s10:1149018..1149757-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000639-696486 ID=EMLSAT00000000639-696486|Name=EMLSAT00000000639|organism=Lepeophtheirus salmonis|type=mRNA|length=740bp|location=Sequence derived from alignment at LSalAtl2s10:1149018..1149757- (Lepeophtheirus salmonis)
TTCGTATCCGACGGCGTTTTCAAAGCCGAGCTCAACGAATTTTTGACGAG
AGAGTTAGCTGAGGATGGCTACTCCGGCGTTGAGGTTCGTGTTGCACCCT
TACGAACGGAAATTATTATTATGGCTACCAGAACTCAAAATGTTCTTGGA
GATAAGGGCCGAAGAATCAGAGAGTTAACTTCTGTTGTGCAGAAGCGCTT
CAGTTTCCCTGAAAATAGCGTGGAACTCTATGCCGAAAAGGTGGCCGCTA
GAGGACTTTGCGCTATCGCTKAAGCCGAATCCCTCCGATACAAACTTATT
GGTGGACTTGCTGTTCGACGTGCATGTTATGGTGTCCTTCGCTACATTAT
GGAAAGTGGAGCACGAGGCTGCGAAGTCGTCGTCAGTGGAAAACTTCGTG
GACAAAGAGCCAAGTCAATGAAATTCGTTGATGGTCTCATGATTCATTCT
GGAGACCCATGTAACGACTACGTCGACACTGCCTGTCGGCACGTTCTTCT
TCGTCAAGGMATTCTAATACTCAATCTTGATAACATCCGTGTTCCAACAT
CCAATATTTTTTAGGTGTCTTGGGTATCAAGGTTAAAATCATGTTGCCCT
TCGATGTCACTGGCAAGAGTGGACCTCGTAAGCCTCTGCCTGACACTGTT
TCGGTTGCTGAGCCCAAGGAAGAAGACATRCCCGCCAATCCTTTCTCAGA
GCCTAAGGCCGCTAAACCAGAGGCTCAAGTTGTTATGTAG
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