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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1105 | supercontig | LSalAtl2s1105:10429..15878 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000657 >EMLSAP00000000657 ID=EMLSAP00000000657|Name=EMLSAP00000000657|organism=Lepeophtheirus salmonis|type=polypeptide|length=1442bp
MSGARTGSPPSCGSTRSGSNNKSNGKGRPSRRVKEDEGRRKRPEVEHYKP
PGAKKGGCEKKNGSVNPTPCATNSNANADPSSNGLLKYGNGEPKEKNDVQ
GGGAPNNGAPFKSKASKKRNHRKEKPPKKTETSGGIKNGXEGDSVPTEQT
KKRATPPRSKPINGHPDSPTLRKSNRNNRKDASGDNHPPRDRRNWNGSRS
SKSGHHDKSQVPRSKEVEKHHEEVIEYHHELSSRKTSLSSPTDSSKQSPL
FRVEESLSERVNDWSLEVEMEDEKKKREKESERLRPRESHNNNARHVPPK
QIRISPPSNKNAGGIIRIPSGGVESNNWRLRDEKINSSPAKEENDPYRRQ
SRVLYDPKNPNKHIPVRNNSGHPSMSRDHIPSQDFFPPSYNGVSSMVPPH
SIDVSRLPHPHAPLNYQHPIPYGLSLRPNGPEWYDVFNSRIYGNDKHDIN
NISLIVRCDLRIYEITMHGSWELLSQLWDTEVAECRQNILKAFEELLKSD
LVFCLKHNVEFHIWKIAFWNLTEVLKILLAKEESQELRSIIKSRISQLID
EGIEFYERALKLLDETYEIDLESYYDILKPRPSDKFQRCVLVTAQNCLIC
LGDLARYKEQVNESCNFGKTRHYYIKATSIETRNAKPFHMMAVLSNMAKR
KLDAIYYHMRCLQCKNAFRTDQQSLTVIFEEFKKNWEANERKKIIDKERK
LRNSEREKEGSHNLIKGTRLRNEIWIKSEGGRRLHRTTSARESETIDVED
IELMEMNSMDLCKRFITTFIYLLGKLFTYIDMDSFPLALEILQKEFRVLI
SRSPLPIDVKSLVQIMAMNMFIIEHTKMKNGDTHNYRSSMQNAALQLSFE
MFGILIERCNQIFQKIIPEFQSGERSLLEDEDLSILLPPVKVWCDWMLGN
NDTWYPVVSEDPFNQLAILATHLEKLKPLMRPVLSSFVCEDTSKENVQAY
NLIKLEEDAILCGLTPWFRGMDWASYRRYYPKDASYSSKLAHEVRRYDAI
NFCVEFLEGLESPILKWSLPDNAHISLVENNELSSAVDKVNAKLSNMLAC
QQDILEESYSEDESDAKDVLDCDISIPNEEIRALKHRKEILERQRMAEER
EMVNMQKKILADHVSVTLEIRPQYLVADTNCFVDHLDGIKALVASSQYHL
RVPLVVLNELDGLSKGARPSKYSSQEHANMVSDNARRALNFLRNRPRNTK
CVTSRGVVINYFGITSEEDPNYEKKNDDLILDICLNLSSNKEETKGNMRI
MIRLLLSRISLSSSFHTSPRSQALPPHVVLFIKPLSRIGAFVIGKTFKRL
WRNLPKEKKEKYKEFVAQNNIKVGVLSGLISLAGLTAYCSHLEVNPISKK
RYFMILNHDQMRKISHREFNKIIENHEGHILGAPNPAYERVVRVVIKLLD
GNRDLTDVLKLNWTVSVVSDDEINAFVLQVRRLFLKCNKKGF back to topmRNA from alignment at LSalAtl2s1105:10429..15878+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000657-696504 ID=EMLSAT00000000657-696504|Name=EMLSAT00000000657|organism=Lepeophtheirus salmonis|type=mRNA|length=5450bp|location=Sequence derived from alignment at LSalAtl2s1105:10429..15878+ (Lepeophtheirus salmonis)
ATGTCAGGAGCTCGGACGGGATCCCCTCCTAGTTGTGGTTCTACTCGCAG
TGGATCCAATAATAAGAGTAATGGGAAGGGACGGCCTTCGAGGAGAGTGA
AGGAAGATGAAGGTCGGAGGAAGAGGCCTGAGGTGGAGCATTACAAGCCT
CCGGGGGCGAAGAAAGGAGGGTGTGAGAAGAAGAACGGGAGCGTGAATCC
CACTCCCTGTGCTACTAACAGCAACGCCAATGCAGACCCAAGCTCCAATG
GGCTCCTAAAGTATGGTAATGGGGAGCCAAAAGAGAAAAACGATGTGCAA
GGAGGAGGTGCGCCCAATAATGGAGCTCCCTTCAAATCCAAAGCATCCAA
GAAAAGAAATCATCGTAAGGAGAAACCTCCAAAAAAAACAGAGACTTCTG
GTGGGATTAAGAACGGACAKGAAGGCGATTCAGTCCCCACGGAACAGACA
AAAAAGAGAGCTACTCCTCCGCGTTCTAAACCTATCAATGGCCATCCAGA
TTCCCCTACTCTACGAAAGTCAAATAGAAATAATCGCAAAGATGCTTCAG
GAGATAATCATCCACCTAGAGATCGCCGAAATTGGAATGGATCTCGTTCT
TCCAAGAGTGGACACCATGATAAATCTCAAGTACCTCGCTCTAAAGAAGT
AGAAAAACATCATGAAGAAGTTATTGAGTATCATCATGAATTGTCGAGTC
GAAAAACAAGTTTATCTTCTCCAACAGATTCCTCGAAACAGTCTCCCTTA
TTTAGAGTTGAAGAATCTTTATCTGAAAGGGTTAATGACTGGAGTTTAGA
AGTTGAAATGGAAGATGAAAAAAAGAAGCGTGAAAAGGAATCCGAACGTT
TAAGGCCTCGCGAATCTCATAATAATAATGCACGCCATGTGCCGCCAAAA
CAAATTCGTATATCTCCTCCTAGTAATAAAAATGCTGGTGGAATCATTCG
GATTCCTTCAGGTGGGGTTGAAAGCAATAATTGGCGATTAAGAGATGAAA
AAATCAATTCTTCTCCGGCGAAAGAAGAAAATGATCCTTATCGTCGTCAA
TCTCGAGTTTTGTATGATCCAAAAAATCCCAATAAGCACATTCCTGTCCG
TAATAACTCAGGACATCCCAGTATGTCACGGGATCACATTCCATCCCAAG
ACTTTTTTCCTCCTTCTTATAACGGGGTCTCATCAATGGTCCCTCCTCAT
AGCATTGATGTTTCAAGATTGCCTCATCCACATGCCCCACTTAATTATCA
ACACCCTATACCTTATGGATTGTCTTTACGCCCTAACGGTCCTGAGTGGT
ATGATGTTTTCAATTCAAGAATTTATGGAAATGATAAACATGACATAAAT
AATATATCTTTAATTGTGCGGTGTGATTTGAGAATTTATGAGATAACTAT
GCATGGAAGTTGGGAACTGTTGTCTCAGTTATGGGATACTGAAGTTGCGG
AGTGTCGTCAAAATATTTTAAAAGCCTTTGAAGAACTTTTAAAGTCTGAC
TTGGTTTTTTGTTTGAAACATAATGTTGAATTTCATATCTGGAAAATTGC
TTTTTGGAATCTTACTGAAGTTCTTAAAATTCTCCTCGCTAAAGAAGAAT
CACAAGAACTTCGTAGTATAATCAAAAGTCGCATATCTCAACTAATTGAT
GAAGGTATTGAATTTTATGAACGTGCTTTAAAATTATTAGATGAAACTTA
TGAAATAGACTTGGAGTCTTATTATGATATCTTAAAACCTAGACCTAGTG
ATAAGTTCCAGCGATGTGTTCTTGTAACAGCACAAAATTGTCTAATTTGT
CTTGGTGATTTAGCTAGATACAAAGAGCAGGTGAATGAGTCCTGCAACTT
TGGTAAAACTCGGCATTATTACATAAAAGCAACTTCGATAGAGACACGAA
ACGCTAAACCTTTCCACATGATGGCTGTTCTCTCAAATATGGCCAAGAGG
AAACTTGATGCTATTTACTACCACATGCGATGTCTTCAATGCAAAAATGC
ATTTCGAACGGATCAACAGAGCTTAACGGTTATATTTGAAGAATTTAAGA
AAAATTGGGAGGCTAATGAACGAAAGAAAATTATTGATAAGGAAAGGAAG
CTCAGAAACTCTGAGAGAGAAAAAGAAGGATCTCATAATTTAATCAAAGG
AACAAGATTGAGGAACGAAATATGGATTAAAAGTGAAGGAGGGCGTAGAC
TTCATAGGACTACTTCTGCTCGTGAATCTGAGACGATAGACGTGGAAGAT
ATAGAACTAATGGAAATGAACTCCATGGATTTGTGTAAAAGATTTATAAC
TACGTTTATCTATCTATTGGGGAAATTATTTACTTATATTGATATGGATT
CTTTTCCGTTAGCTTTAGAAATTCTTCAGAAAGAGTTCCGAGTACTGATT
TCTCGGTCACCTTTACCCATTGATGTCAAAAGTTTGGTTCAGATCATGGC
TATGAACATGTTTATTATAGAACATACAAAAATGAAGAATGGGGACACTC
ACAACTATCGTTCATCAATGCAAAACGCTGCCCTTCAACTCTCTTTTGAA
ATGTTTGGAATCTTAATCGAAAGATGTAATCAAATTTTTCAAAAAATCAT
TCCTGAGTTCCAATCTGGTGAGAGATCTTTACTTGAGGACGAAGATTTAA
GTATTTTATTACCACCTGTCAAAGTATGGTGTGATTGGATGCTTGGTAAC
AATGATACTTGGTATCCTGTTGTGTCAGAAGATCCTTTCAATCAACTCGC
GATTCTTGCTACGCATCTTGAAAAACTAAAACCCTTAATGCGACCCGTCC
TGTCTTCTTTTGTTTGTGAAGATACATCGAAAGAAAATGTGCAGGCTTAT
AATTTAATCAAATTAGAGGAGGATGCTATTTTATGTGGCCTAACTCCATG
GTTTAGGGGAATGGATTGGGCTTCTTACAGAAGATATTACCCCAAAGATG
CTTCTTATTCTTCTAAATTAGCTCACGAAGTACGCAGATATGATGCAATT
AATTTTTGTGTCGAATTTTTGGAGGGACTGGAATCTCCTATTCTGAAGTG
GTCGCTACCAGATAATGCGCATATATCTTTGGTAGAAAATAATGAACTTT
CATCAGCTGTAGATAAAGTTAATGCTAAATTGTCCAATATGCTCGCGTGT
CAGCAAGATATTCTGGAGGAGAGTTATAGTGAGGATGAAAGTGATGCAAA
GGATGTTCTTGATTGTGACATCTCTATTCCTAATGAAGAAATTCGTGCTT
TAAAACATCGAAAAGAGATTTTGGAGAGACAAAGAATGGCAGAAGAAAGA
GAAATGGTGAACATGCAGAAAAAAATTCTTGCAGATCATGTTTCTGTCAC
TTTGGAAATTCGACCACAGTATTTAGTAGCGGATACCAATTGCTTTGTTG
ATCACTTAGATGGCATTAAAGCCCTAGTTGCTTCTTCTCAATATCATCTA
CGCGTCCCCCTTGTTGTTTTAAACGAATTAGATGGTCTATCAAAAGGAGC
TCGTCCCTCCAAATATTCCAGCCAGGAGCACGCAAATATGGTTTCAGATA
ATGCTAGACGAGCCTTAAACTTCCTTCGGAATAGACCACGCAATACCAAA
TGTGTTACTTCAAGAGGGGTTGTTATTAACTATTTTGGTATAACTTCGGA
AGAGGATCCAAATTATGAAAAGAAAAACGATGATTTGATACTGGATATTT
GTCTCAATTTATCTTCAAATAAGGAGGAAACTAAAGGGAATATGAGGATT
GTATATCGAGACGTGGTTTTATTGACTGATGATCGTAATCTTAAACTCAA
GGCACATATAACTGATATCCCTGTGAATAAGTTTATTGACTTTTTTAATT
GGGCAAAATGTTCCTAAGAGAATATTGACTTTTTTTTTCCTTTTCGTCTC
TGTCTATTTCAGAAGGAATGAAATTGGGGTTAACTATTTTACCTCTATGA
TATTATTATTATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGGGATYTATWAAAAAAATCATACTATGCTAAAGAAWAAATCATAACT
ATTTCTTTGTGTTTGTGTGGTTTTTTTTTTTCATTTWTTGATTCTGTTTA
GTTACTTATGCCCTTCAATTATATTCATTCAGAGTTCATCTTTTTTTTCC
TCTCCCAAGATTAATTATAAGTTATGTATTCAGGCGACATTCATAACTAT
TACTTTCTTGTTGCTGAAAAAGATACACTATTTTTTCTTCTAAATCCCTC
CCTCCTCTCTCTCTCTCTTCCTCCTTCCACATTATCATTATTAATTAATT
AATTTGGAATAGTTTTTTTGCACATCATTTCTCTTGTAATATACCTTATT
ATTACGATTATGCTACTACATCTATTTTACCGTGTATGTCCCTTCGTTTC
TTTTGGATTATGATAATAACTCAATTTATAATGTTTAGAAAATGTATACT
ATACTCGGCAACTGTAAGCCAATTTATTTAAGTTGCTTGAATTTTTTTGG
AATTAAATGACACTTCAGTTAATATTACAATCATACTTACTCATATTTAT
ATGATAAGAACACTATTTTCAATTTTTCTAAACTCTGGATTTTTATTTCT
TATAAGATGATTCGACTGCTACTATCACGAATTTCACTGTCCAGCAGCTT
TCATACCTCTCCAAGATCGCAGGCACTTCCACCTCATGTGGTTCTATTTA
TAAAACCCCTATCTCGAATTGGAGCTTTCGTCATTGGAAAGACTTTTAAA
AGACTTTGGAGAAATCTTCCGAAAGAGAAAAAAGAGAAATATAAGGAATT
CGTAGCGCAGAACAATATCAAAGTTGGAGGTAATTCGAATTAAAATATAT
TATACACTAGAGTACGAAAATTGCAATTTACTCTTCATTCACAGTATTGA
GTGGACTAATTAGTTTAGCTGGGTTAACGGCTTATTGCTCTCATCTTGAG
GTGAATCCTATCTCTAAAAAAAGATATTTCATGATCTTGAATCATGATCA
AATGCGCAAAATCAGTCATAGGGAATTTAATAAGGTCTGTGGTCTTAAAA
TATAAATCAATTTTATTCTAAACATAAAAAATAGATCATAGAGAATCACG
AAGGTCATATTCTTGGAGCACCTAATCCGGCATATGAACGAGTTGTTAGA
GTTGTGATAAAATTGCTGGATGGAAATCGGGACTTGACGGATGTACTTAA
ACTAAATTGGACGGTATCCGTTGTGAGTGATGACGAAATCAACGCATTCG
TTTTGCAGGTAAGAAGGTTGTTTCTGAAGTGCAACAAAAAAGGATTCTGA
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