EMLSAT00000000660, EMLSAT00000000660-696507 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000660
Unique NameEMLSAT00000000660-696507
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1105supercontigLSalAtl2s1105:164650..167253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000660 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000660EMLSAG00000000660-683426Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002877EMLSAE00000002877-711805Lepeophtheirus salmonisexon
EMLSAE00000002878EMLSAE00000002878-711806Lepeophtheirus salmonisexon
EMLSAE00000002879EMLSAE00000002879-711807Lepeophtheirus salmonisexon
EMLSAE00000002880EMLSAE00000002880-711808Lepeophtheirus salmonisexon
EMLSAE00000002881EMLSAE00000002881-711809Lepeophtheirus salmonisexon
EMLSAE00000002882EMLSAE00000002882-711810Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773654auto773654Lepeophtheirus salmonispolypeptide
EMLSAP00000000660EMLSAP00000000660Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000660

>EMLSAP00000000660 ID=EMLSAP00000000660|Name=EMLSAP00000000660|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MGDPDNTTPVEVPAEMSVFRQFFNSLDDLKNLPPSVKRRIKSLKKLQFET
TKIEAEFYREVHQLECKYQERYTPLYELRNKITTGAYEPNDEECEWESEE
DSDEEGADEQNNKKPEVVEAADDNTKGIPEFWLKVFNNVDILVDMVQTHD
EAILKHLEDLKVTFSEKDPMGFTLHFIFSPNDFFTNKVLTKEYIMKCEPS
DGDPFGFEGPEIYKCVGCNIDWKPGKNVTDKEVVKTQKHASKGTVXSXVD
TXXADSFFNFFNPPEIPEDPNAQIETNLQDLISMDFEIGHYIREKIIPRA
VLYFTGEALEDDGDVEDESNDDDDDDDEDDEEYGSDNEVQSKEDCKQQ
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mRNA from alignment at LSalAtl2s1105:164650..167253+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000660-696507 ID=EMLSAT00000000660-696507|Name=EMLSAT00000000660|organism=Lepeophtheirus salmonis|type=mRNA|length=2604bp|location=Sequence derived from alignment at LSalAtl2s1105:164650..167253+ (Lepeophtheirus salmonis)
ATCATGTTACTACGATAACATTGGAGTGAGTAAAGTAATAAGAATAGTAG
TAAGTAGATGTCGCTTTGATCTTCCTTTTTCCTCTAGCTACTACATAAAT
TCATGTTTTTTGAAAGGCTGTTGGCAACTTAATATTGCCGCTCTTTTGCT
GCTTAAGAGAAGGAGCGCGAATTTAACTTGAAAAGAAGAAGAGTCACACG
ACGACAAGGACTACGTAGTTGCTTCTGCTCAGTAGTAGTTTTAAGGAGTG
AAATACGTTGATAAAATATGGGTGATCCGGATAATACTACTCCTGTGGAG
GTTCCTGCGGAAATGTCGGTATTTCGTCAGTTTTTCAACTCTCTTGACGA
TTTAAAGGTAACTATTCTCATCATGGAACACTTGGCTTCTCTTTCTTTTT
TATTGAACACGCGGTCATTGAAAGAAAGAGATGGCGCTAAAAAACGAGGA
GGTTTTTGAGTGTAGTGGTCGAAGTGTGGAATACATTATTCCATGGAATT
CCTTTATTTTTCTCACTTTTTATGCATTTGTGATGGAGGCTTTGTTCCCT
TATAAGCTTGTTATGAACGTTCCTTCCTTATTAACTCCTTAAAATCTTAA
TTTTGAAGAATTGACTCGTCCTTTGTAAGAGCTTAGTGTTTGCTGAGAAA
CACGTGTTCTTACGTAATGCGTACTGGAACTCCTATGATGATGGATACAA
GTCCAAGTGGACAGCACAATGAAATAACTTGTCATCCATCACCCGGACCT
TTCCATTTGGCTCCCTATTTCTGAACTCTATTAACTGCCATGATGATTAT
GATCCCAATACCATTTTCCCCTGACACTTGATACAATTAGTACACACCTA
GTAAAGGTTTTAATGTTCTGATTTACTTTATAAAGATATTATACCTCGTG
TGGATTACATTTTTTGCGGCTCAATTATTATTGAGTGAATCGTCAACCGT
TCTTTCTTCAATATTTCTTTTTTTCTTTTCAGAATCTCCCTCCTTCAGTA
AAAAGAAGAATTAAAAGTCTTAAAAAGCTTCAATTTGAAACGACAAAGAT
TGAAGCTGAATTCTATAGAGAGGTTCACCAACTTGAATGTAAATATCAGG
AAAGATACACTCCCTTATATGAGCTTAGAAATAAAATAACTACAGGTAGG
GACGATGCGATCATCATGGATCTCTTTTAAAATCTTATTCTATTTATTTG
TAAGGTGCGTATGAACCTAATGATGAGGAATGTGAATGGGAGAGTGAAGA
GGATTCAGACGAAGAAGGAGCTGACGAACAAAACAATAAAAAGCCAGAGG
TGGTGGAGGCAGCTGACGATAATACGAAGGGAATTCCTGAGTTTTGGCTT
AAAGTGTTCAACAACGTAGATATTCTAGTAGATATGGTTCAAACTCATGA
TGAAGCCATTTTAAAACATCTTGAAGATCTAAAGGTTACATTTAGTGAAA
AAGATCCTATGGTATGAGCCCTTTTCTTTAATTATGAATTGAACTTGTCA
TTTTTTTTTTTTACTTTAGGGCTTCACGCTGCATTTCATTTTTTCTCCCA
ACGATTTTTTCACAAACAAAGTATTAACAAAGGAGTACATTATGAAGTGT
GAACCTTCGGATGGAGATCCTTTTGGTTTTGAAGGTCCTGAAATTTACAA
GTGTGTTGGCTGTAACATTGATTGGAAACCTGGTAAAAATGTTACTGACA
AGGAAGTAGTTAAAACTCAGAAACATGCAAGCAAGGGCACTGTTCMTTCT
KCCGTTGATACGYATKAAGCCGATAGCTTCTTTAACTTCTTTAATCCTCC
AGAGATTCCCGAAGATCCTAATGCGCAAATTGAAACAAATTTACAGGATC
TTATATCAATGGACTTCGAAATTGGACATTACATTCGTGAAAAAATCATC
CCTAGAGCTGTTCTCTACTTCACTGGTATGCTTTTGTTCAGTATTATAAC
TCGCGAGAGGGTCGTAAATAGTATTTTGAATTTATGAAGGGTTGAGCGAA
GTAGTCGTCAAAATAGTTCATTTAAATCATTAATCCTCGTTTCATTGCAT
GAGCCTTTGTATTTTTCAGTTATTTAAACTAAATATGTCTTATGACCTGT
AGGTGAAGCATTAGAAGACGATGGCGACGTTGAAGATGAGTCCAACGACG
ACGACGACGATGATGATGAAGATGATGAAGAATATGGATCTGATAATGAA
GTTCAGAGCAAGGAAGATTGCAAACAACAATGAAACTCGAATTTATTAAC
TTCTAATAGGAATGTTTTTCACTTCCCCATTCACCACGCGCGCAAATCCT
TCATTAAATTTGAAATGATATATAAATTTATATGCTTAAAAGTAATCCAT
TTTGTCGTATAAAACATATACATATATATAGTTTTATATTAGACTGTTGA
AGGTATTTTGATAATTACAAGCTCTTAAGACTCTTATCTCAATAGCATCT
CTAAAATTAAATAAATGGACAAAATAAATCAAAAAATTTCATTTTGAATT
TACCTCTCGATTGAAATATGCTCTATCCTTCACTACTTTTTATCCGATTT
TACTACTGAAAATAATAATATTTTTCATGTAGAATAGCGGTTACTCGTTC
AATG
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