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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1105 | supercontig | LSalAtl2s1105:19776..25400 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000661 >EMLSAP00000000661 ID=EMLSAP00000000661|Name=EMLSAP00000000661|organism=Lepeophtheirus salmonis|type=polypeptide|length=188bp
MLNGNIFVFTGMLKACQNDDQLAIVLSHEIAHVLLYHVDAKLSYSSLVSI
LLLTPLAMIWALMPNDGFAIVANWFLDKCSSIIMELPFSREMEKEADEIG
MLMAAKSCYDTREGPVFWGRMALREKVLDRNIQKEPLFSTHPTNESRQAH
MDYLLEETMRVRLSCNCPSLVKEDPMLRFRRLENKIKL back to topmRNA from alignment at LSalAtl2s1105:19776..25400+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000661-696508 ID=EMLSAT00000000661-696508|Name=EMLSAT00000000661|organism=Lepeophtheirus salmonis|type=mRNA|length=5625bp|location=Sequence derived from alignment at LSalAtl2s1105:19776..25400+ (Lepeophtheirus salmonis)
ATGCTTGTGTTTCACCATTTTCAACGCAATGGCACGTCGAAAGACTAGTA
TTCACAATATTTATTAATTTAAAAATAATAATATTTATTAATTATTATTA
CTCGGTCAGTAGAAACTACTACTAGTTAGTAGTTATACTACTTCACAAAT
TACTAAACACTTCCCGCTTCTAATGCTTTGTTTGAGTGTTCACAGAGGTC
GCTGTGAAACAGTTCAATCTCCACCCGGCTTCTAGTTTTTTATCCACTAG
CTAGCTTTATTCAGTGAAAGTTTGATCATCATACGCACCATCTAAAGAGC
TTTACTTTGTGTTGATAGCGGGAAAGGAGGGAGAAGACAATAGTAAAAAA
AATAGAAAAAATATTCACAAAGTACTTCTATATAATACATATAAATACTA
ATAACTATTAAGTAATCATTACAATATTAATGTTTGATTGTTGTCGAGAA
AGACCCTGATAATTAGTAATTCTCTTATTATGGTTAAGTTATATAAAATA
TATACCTTTATTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGACACCTGATAATTAGTAATTCTCTTATTATGGTTAAGTTAT
ATAAAATATATACCTTTATTATGATCATAACGATGGAGGGGGAAATAAAC
TATATTGTATATATTACTTACACTATTTATACTTATTACTTATTAATTAC
ACATATTATGTCAAATTAACTCTTTATATTATGTAATCACACTATCAATC
TGTTTAAGAAAGGTAATACACGAAGGGTCATCATAGCACTCCCTCCCCCA
AATACTCCTGTAACCACTTTTCTAAGAAGCTGCTGAGATATATCCTCTAG
ATCAGTGAGGAGCACTGAATCATCAAATTGATAGCTCACAGTATCCTTCT
CAAGGATGTACTTTGACAAAGTCACTAGTTTCAGACAATGTTTAAACTCC
TATACATTTGTTGTATAATCTTTTGCTACACAGAGGAGAACAAATTCTCA
ATACATTATTGAGTAAAGCGGGTACACAACAAGAAATCAAATTTACAAAT
CGAAAGAAACTTATGCTGCAATGTTTTCAGAGATGATGTACTTAAAATTA
TGCCTCTTTGGATTGGCTTCCATCAATTATAGCCATTAATGTGTAAGCTC
TTAAAACATATCGAAAGTAAATCCGTTGTCTCTTTATATTTTGACATTAA
ACGCAAATTGAGAGAAACAAAGCGTCTTCTGGAAGTGGTGAAGTCAAATT
AAAACCCTATTTGATCACAAAACCATGTCGTCATAAGAAATTTATTATCA
AATGATCCAGTAGAAATGAACCCTGGAATTGCCAAAATGGAGTTACACCT
AAAAAAAAAATCTTTTTTAACAATTTAATTACTAAAAATTACCAAAAGTA
AAGCTTAGATCGAATATTTTATCCGTTAAAATTAGGAGTCATCTTTTTGG
CAATGGATGTACAATATATAATATAACGTAAACTTCTAAAAGAAAATTAA
GAAAGAGAGGATCGAAGGGTTGAAGAGGATTAATATTCTAAGATATTCAT
CATTAATTAAAAGATTTTTTTTAAATATTTTATTTCAGTTCAAAAATGTT
GTCTTGATGGAAGAAATATTATTGGTAGCAAGTGACTTCACATTGATTCT
CAGATGCTGAGGAAATAAAAGTGGTGTAATATTGTACAAAATCAATTACA
TTTTGCCATTTTTTTGCATTTTGAGGTTAATTGATTGACCCTTGGTCCAG
TTAAGATATTAGTAGAACTCATTAATTATATCCTCCATTGATCTTTGAAT
AATAATGTAATTAATTCATAAAAATGATTATGCATTTATGTCAGTTGCCG
AACAGAAAAGGATAGAAAACTGTTATTTAAAAAAACTATCGATTATTCAT
ATCCACAATTCATGAGATTAGAAGTTAGTAAAAACCACATGTATTTACGC
ACAGAGTTGAATTGATTTAGAATTAAAATAAGTTTTATTTAAATAAAATG
AAATATTCCCCCATTACTAACGTAATTAACTCATTTGCATGAACAAGATT
GTTATATCTGGTGGCGTATTAGACTGTATCGATTTTCTATATCCCCATTT
ATGAGCTTAAAAGGATGAAAATAATGTAGTTTTTAGTGACTAGGTACATC
TAATTCCTATCAAGTAAAAATTATTGATAATGAGTGAGCCGGGAGTCAGC
ATTCACATGTATTTACTCATGGAGTCGGTTTGGATCACAGATAATAATTA
ATGCGCATATTTATCTGAGAGTTTCAAATTTTAAAAGCTGCAGATTCGGA
GCCAGGATCTCTAAATATTATAAATCCAACCTTAAGAAACTATAAGAATC
ATACTCTAGATATTAATTTTAAATATCAATCCTTAAAATAATAAAAAAAC
ATTATCAATCTCATTAAAACTATATCTAAAATAAATTATTCTTAATTTAT
AGTTTGGAAGTACGTACAGTCCAATGAAATCTAATCCCCATCTGGAGGAG
CACAAGTACAAATCACGTAACTTCTTGTAGTGAAATATTATCCAAAAATG
GAAGAATTGCTTAAAATACCACGTGACGTTGTCATAAAACTACAACTACG
ATAAATATTATAGGCTTATAATTGTGCAAAGTTCATTTGAATTCACCAAG
AGAAATTATCACAAAAATTATGTTTTTACAACAGGTCGCGTGATGAGAAC
TTAAACTCCTCCAGATAGTATTAGTACTCATTAGTCATTGTACAGTCCAT
AAAGAAAATTTTCTATAGTACAGTCATTCTTAATGGCTAATTTAAATCTG
GCTATTTAGGCTAAAATTTATTCGATCGAATTGGAACTCAATTGAAGTTT
CAAAATTCGAAAAATGAGTATAAAATATAGCTAGATGTACATACTCATAG
TAGTTATCTTGTTCACAATAAGGTTGAACGAGATACATATTAGTGTCAGT
TGCTATGGAGAATTTATTTCAAAATCTAATATAATTTGAATCACCGTCTG
TGATCGCCACGTGTTTTTTAATAACTCAAATTTATGTTTTAAATTTTGTC
GAACCTATAATGAATTGAGGATCCATTTTCATTCAATGTTGCCACTTTTT
TCAATTAATTGTTTTAAACTATTACAATTTAAAATATTCTTTAACTGACG
TTTGGTATCTGAATTAGACAATTACATTTTTTTATTCTATTTCATAGAAT
GGTAATATATTCGTATTTACTGGGATGCTCAAAGCCTGTCAAAACGATGA
TCAGTTGGCAATAGTTCTGAGTCATGAAATTGCACATGTCTTGCTCTACC
ATGTAGTAAGTTAAGGGATAAGTAAAATAAATTAAACAAATCTTTGTTCT
TTGTATAGGATGCTAAACTAAGCTATTCAAGTTTAGTGAGTATATTGTTG
CTTACTCCTTTGGCAATGATTTGGGCCCTCATGCCAAACGACGGATTTGC
AATTGTAGCCAATTGGTTTTTAGATAAATGTTCGTCCATCATTATGGAGC
TGCCTTTTAGCCGAGAAATGGAGAAAGAGGCCGATGAAATTGGTATGCTG
ATGGCTGCAAAATCTTGTTATGATACAAGAGAAGGTCCCGTTTTTTGGGG
AAGAATGGCTCTTCGGGAAAAGGTCTTAGATAGAAATATACAAAAGGAAC
CTTTATTCTCCACGCATCCCACGAATGAATCAAGACAGGCTCATATGGAT
TATCTACTTGAAGAAACAATGCGAGTCAGATTATCATGCAATTGTCCCTC
TTTAGTAAAAGAAGATCCCATGCTTAGATTTAGAAGACTCGAGAACAAAA
TAAAACTTTGAGTTGTGACGTATTTCAATATTGAGGTGTTACTATAGAAA
GTTGAATCAGATATCCATAATCCGTTCCATATATTGTGTAATATTAATAC
TAATAACTTGATTAAATTATATATTAGCCGAAGAAACTTTATTTTGAAAT
CAAAGCTAAAACATTTAAATGTATAGGTAATTAATATTAAATAGTGTAAT
TAGGTATATAATGTATACTAGTCAGTCTTAATTGGGACTAGAGAGTGGAT
AGGGTAATCCACTACTCCAAAAGATATGGTCTCACTCCATACGGGAATTC
AGAAAGTTGAAATTTAAAATGGTTACATAATACAACTTTTTTTATAACGT
AGATATTATATGAATTATACTCATATTTTTGAGACAAGATGAAAGAAATC
TTGGGAGATTTACTTAATTCAATTGTATCCAATAATAATTAATGAGACAA
AAAGGTTCATTTTGAATTTACATTTGGATTTATTCGAAATAGAACAAAGG
TTAACTAATAAGGGTGACTACTATTGATCATTATTAAAAAAAATAATAAT
ACGTAATATAACAGAAATATAAGAAATATGTAAGAAGGTCAGATAGAGAC
GGAGAGAGGAATACTATTATTGTTTATATAATAAGGGAGAATGGTTCTTC
AAGAAGTGAATTGGAAGGTAAGCAGTTTAATATTATATAGTATGAATTGT
TTCTTTGGAAATAAAATAAAAAGTTTGATCATTCAAGAATGGACCTTATG
TGGCATTTCAATAGTTTCCTCARCGGGAGCATAGCGCCATCSCCACMAAG
CCACTTTCATTCTGTCCCAGGCTGCANGTAGGAGAGTCTAATGCAGGTCT
AACATCAAGAATGGCAAACTTATGACTCTTAGCATCAATTTCTCCGGAAT
CATAGTAGTCAATAATGTATCGAACATTCCTCCCGCATCGATCCACAATC
CAGTCGTGGCGATCAAAGGGTAGCTCATAGCCTAGGAGAGACCTAAATCG
AGCTCTGGGAGAGAATTGAGTGGCCTTTCCTCCAAATGACTTGAGAGAGG
GATTTCCACACTCGAAGGCGTGTAGAGCTTCCCATTTAAGAACCTCTCTC
CATGCAGCCTCATTGTTGACGTTATGCATGCGAATGATGTGATTCATGGT
CTCTGGGTTCATCCCTTCCTCTTCCTTCCATCGCCATCCCTTGCGAAGCA
TTGCATTCCAAAACATCTGAGCAGAGGGATACGTCCACGTCTCTCCCTTC
TCAGTCCCTGCCTTCGGAATATTGGACCTCTCCCGAACTGTATCTAGGGA
AAAAGGCTGATCGGGGGCGGGACGCTGATTTGGAGGGGGCATCATGTTGG
TGGGATCGATATCGTCTTTCAGTGTGCATCCAGACCCTCCTACATCTCCC
TTTCCATGCATAGGACATTCCGAAGGGGGACTTGGACTAGTCAAGGATTC
CGCTGAAACGTTTTGTCCCATCTCAAGTCCTCGGCAACCACTTCACACAC
AGACACTTCTCACAAGTGAAAAAAATATAACTAGTAGTAACTTAATGTTT
GCTAATAGTAGCTAGAAGAGGCAACATGGTCGATCTTGAATTCGCAGCTG
ATTGAAGCTCTTGCGCTCTAGGCGCACGCTTTCTCAAATATTCATCATCT
AAATTAGGTATTTCATTTTTTAAAACATAATATCGATGCGCTCTCTCTCT
TTCTTTAGATCTCCGGCCATTTCTATGTCGCCCGCGTACATAAACATTAC
CTAAATATTAATTATTATCAACAGC back to top
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