EMLSAT00000000663, EMLSAT00000000663-696510 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000663
Unique NameEMLSAT00000000663-696510
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1105supercontigLSalAtl2s1105:26596..27688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000663 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000663EMLSAG00000000663-683429Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002891EMLSAE00000002891-711819Lepeophtheirus salmonisexon
EMLSAE00000002892EMLSAE00000002892-711820Lepeophtheirus salmonisexon
EMLSAE00000002893EMLSAE00000002893-711821Lepeophtheirus salmonisexon
EMLSAE00000002894EMLSAE00000002894-711822Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769745auto769745Lepeophtheirus salmonispolypeptide
EMLSAP00000000663EMLSAP00000000663Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000663

>EMLSAP00000000663 ID=EMLSAP00000000663|Name=EMLSAP00000000663|organism=Lepeophtheirus salmonis|type=polypeptide|length=307bp
MDSREKTPIPGLPSLASVSAAEPYVESNPTNSLEKVERLIPEVKEGINRV
SEIMKYGFPSLDTVRSRRXXKRQESRGTXLLTTPTSGDYVISYDRRNRTP
NWVFEHLTPESCRRNESVDRNLCEFKEDPSIHPFFRSQNKDYKYSGFDRG
HLXAAGNHRQSQEHCDETFYLSNMSPQVGTGFNRDKWENLEWYVRKLAKR
SRNVYICTGPLYLPRLEADGKNYVKYQVIGKNNVAVPTHFFKIVVTESEK
DSPLDLESFVLPNERIDDSIPLSHFYVPPDSVERASGLLFFDKLSKTRLR
SINGKIL
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mRNA from alignment at LSalAtl2s1105:26596..27688+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000663-696510 ID=EMLSAT00000000663-696510|Name=EMLSAT00000000663|organism=Lepeophtheirus salmonis|type=mRNA|length=1093bp|location=Sequence derived from alignment at LSalAtl2s1105:26596..27688+ (Lepeophtheirus salmonis)
ATGGACTCTCGAGAAAAGACTCCTATTCCAGGACTCCCTTCATTAGCTTC
CGTCTCTGCAGCAGAGCCGTACGTAGAGTCCAATCCCACGAATTCCCTTG
AGAAAGTTGAGCGACTTATCCCAGAGGTAAAGGAAGGTATAAATCGCGTC
TCTGAAATAATGAAATATGGGTTCCCATCATTGGATACGGTTCGTTCTCG
AAGGMAAAGMAAAAGACAAGAGAGTAGAGGCACTAKTCTACTGACTACTC
CTACTTCTGGGTTCTGCCACTTGACCATGCCTTTCCAGGGACTATGTCAT
ATCCTACGACCGACGGAACAGGACACCCAACTGGGTATTTGAGCATTTAA
CTCCCGAGTCTTGCAGAAGAAATGAGTCAGTGGACAGAAATCTATGTGAA
TTCAAGGAAGACCCTTCCATCCATCCCTTCTTTAGGTCTCAAAATAAAGA
CTACAAGGTACTACATCTATAGCATTCACATACTTCTTTCCACTCTCCCC
CAGTTTACAGCCAACATAACCAATCCTTTCTCTATCATTCTTTCAGTATA
GTGGATTTGATCGTGGACACTTASCTGCCGCTGGAAATCATCGTCAGTCT
CAAGAGCATTGTGATGAAACCTTTTATTTGTCAAATATGTCACCCCAAGT
AGGAACTGGTTTCAATAGGGACAAATGGGAAAACTTGGAATGGTACGTGA
GAAAATTAGCCAAAAGGTCAAGAAACGTGTATATATGTACAGGGCCTCTC
TACCTCCCTAGATTGGAGGCAGATGGAAAAAACTATGTCAAGTAAGGAGG
TTAAGTCATTAACATTCTGTGTTTTAACAATAACTCTTTACAGGTATCAA
GTCATTGGTAAAAATAATGTGGCTGTCCCTACCCATTTCTTCAAAATCGT
AGTCACCGAATCTGAAAAAGACTCGCCCCTTGATTTAGAATCATTTGTTC
TTCCTAACGAGAGAATTGATGACTCAATACCCTTATCACACTTCTATGTC
CCCCCAGATTCTGTTGAAAGGGCATCAGGACTCTTGTTTTTTGATAAATT
ATCTAAAACGAGGTTAAGGAGCATCAACGGAAAAATTTTATAG
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