EMLSAT00000000666, EMLSAT00000000666-696513 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000666
Unique NameEMLSAT00000000666-696513
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1105supercontigLSalAtl2s1105:6692..7651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000666 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000666EMLSAG00000000666-683432Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002902EMLSAE00000002902-711830Lepeophtheirus salmonisexon
EMLSAE00000002903EMLSAE00000002903-711831Lepeophtheirus salmonisexon
EMLSAE00000002904EMLSAE00000002904-711832Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768650auto768650Lepeophtheirus salmonispolypeptide
EMLSAP00000000666EMLSAP00000000666Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000666

>EMLSAP00000000666 ID=EMLSAP00000000666|Name=EMLSAP00000000666|organism=Lepeophtheirus salmonis|type=polypeptide|length=240bp
MLGLTQRGLQSIGKRFISGSNVLSHDAIFVHRDSPENNENIPFEFNADNK
KRAGAIMSIYPEGHKKAATLPLLDLAQRQNGGWLPISAMNYVADFIDMPR
MRVYEVATFYTMFIRNPVGKYHVQVCTTTPCWLRGSDEILKACKDNLGVP
VGKMTQDKLFTISEVECLGACVNAPMVQINDDYYEDLTVKDMDEILNELK
VGTKPARGPRSSRYAAEPFGGPTSLTEPPPGPGFGVRSDL
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mRNA from alignment at LSalAtl2s1105:6692..7651-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000666-696513 ID=EMLSAT00000000666-696513|Name=EMLSAT00000000666|organism=Lepeophtheirus salmonis|type=mRNA|length=960bp|location=Sequence derived from alignment at LSalAtl2s1105:6692..7651- (Lepeophtheirus salmonis)
ATGCTGGGATTGACTCAGAGGGGGCTCCAGTCCATTGGAAAGCGATTTAT
ATCGGGATCCAATGTTCTGAGCCATGATGCCATTTTTGTCCATAGAGATA
GCCCTGAAAACAACGAAAATATTCCCTTCGAATTCAACGCTGATAATAAG
AAACGGGCTGGAGCCATCATGAGCATCTACCCCGAGGGCCATAAGAAGGC
AGCAACTCTTCCCCTTCTTGATCTTGCTCAAGTAAGTCAATTTGTTATAC
CTTAGTCATTAATATTGACGACTGAGTAATTACTCATAACATTACATTTG
ACTCGAGAGAATTAATCATTCTAGTTAGTAATTACTAATGAGTAATCTCC
AGTTGTTTTTTTTTATAGTAAATATTCTTAATTTCCATAGCGTCAGAACG
GGGGTTGGTTGCCCATTTCTGCAATGAACTACGTTGCGGATTTCATTGAC
ATGCCTCGTATGCGAGTGTACGAGGTAGCAACCTTTTACACCATGTTCAT
AAGGAATCCTGTCGGAAAATATCACGTCCAAGTCTGTACAACAACCCCTT
GTTGGCTCCGTGGCTCTGACGAAATCCTTAAAGCATGCAAGGATAACTTA
GGGGTTCCTGTCGGGAAAATGACTCAAGATAAGTTATTTACCATTTCTGA
GGTGGAATGCCTTGGTGCTTGTGTGAATGCTCCTATGGTCCAGGTAAACG
CTTTGCTTTTCATTCACACTCTCTCATATTACATCCTAACCTATGTAATT
CCCTTTACTTTTCTATTCTAGATCAACGATGACTACTATGAAGACTTGAC
TGTCAAGGACATGGACGAAATTCTAAATGAGCTTAAAGTTGGTACAAAGC
CAGCTAGAGGTCCTAGAAGCTCTAGATATGCTGCTGAACCCTTTGGTGGG
CCAACATCTTTGACTGAGCCTCCCCCAGGACCTGGCTTTGGTGTTAGATC
AGATTTATAA
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