EMLSAT00000000668, EMLSAT00000000668-696515 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000668
Unique NameEMLSAT00000000668-696515
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1105supercontigLSalAtl2s1105:80618..84186 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000668 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000668EMLSAG00000000668-683434Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002907EMLSAE00000002907-711835Lepeophtheirus salmonisexon
EMLSAE00000002908EMLSAE00000002908-711836Lepeophtheirus salmonisexon
EMLSAE00000002909EMLSAE00000002909-711837Lepeophtheirus salmonisexon
EMLSAE00000002910EMLSAE00000002910-711838Lepeophtheirus salmonisexon
EMLSAE00000002911EMLSAE00000002911-711839Lepeophtheirus salmonisexon
EMLSAE00000002912EMLSAE00000002912-711840Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771614auto771614Lepeophtheirus salmonispolypeptide
EMLSAP00000000668EMLSAP00000000668Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000668

>EMLSAP00000000668 ID=EMLSAP00000000668|Name=EMLSAP00000000668|organism=Lepeophtheirus salmonis|type=polypeptide|length=493bp
MDLKKGADLGDLLPQFISQNESSKEFDLEYKTQMWELMVQELSSTKVPSY
HEEALKSLKILSRDKQNLNELIKEESIGVLLKYGLELPYKESQIQALSCL
NNLLLQNEKTSAICSNSPVLKSILHKIEVSYSSDENKDNPPLQHLLGITV
IITILKPIAREIIVKECRGNEILLNLYEFLLYKDKSSNNVGVLCETSKLL
YNIWLLANGDNSKDQYERGVNLIRNVFTTFGSHPEKEKIIKNSINLLSAI
PPHLYSNLLIVSSEEEVSMTVPKECLNYLLSHLDDDELELEESISPTLMF
LCQFSRQNRNVRKYLRRVILPPLKAVQNRPEIGNEPRNKLCKLLTSPTTS
IETLSSEFLFVLCKEQVDRMXKYTGFGNAAGLLARKGLLNRTGRNTDYSD
EDSETEEYVSNSHKINPVIGCIDKPRPSPFEGMSEERKEXEAMKLVSLID
KLNGQGLIRPAMPGPDGQPVPVDHMMQITERIQAQDLSNDESD
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mRNA from alignment at LSalAtl2s1105:80618..84186+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000668-696515 ID=EMLSAT00000000668-696515|Name=EMLSAT00000000668|organism=Lepeophtheirus salmonis|type=mRNA|length=3569bp|location=Sequence derived from alignment at LSalAtl2s1105:80618..84186+ (Lepeophtheirus salmonis)
AATCAAAAAGAAGTGGTGAGTCCCCCTTCACACTCTAATCCCAATCTTAG AGAACTTAGTACCAGTATAATTCGAAAGAACAAGAGTGACGTCATTTTTT GAGGAAGCGTGAGAAAAAATTTCGTGTTTAGGCTTAGAAAAAGTGCAATA ATTCAGTGCTTATTTGACAAATAAAAGTCGTTTTGCATCAACAAAATTCT ACACTCAATAAACATAACAGAGACTTATTTAAAGTACTTGATTAAGTAAT TTTTGAATTTTTTGTAACCTAGCTACTAGACCCTGAATGAATCTTGAAAG TGAGTCAATGAAGTCTGTCAAGTGAATTCTCAATTCTGAATTATTCCATA GAATAAATAATAGAAATTGGGAATTGTAATACATTCTTAATTCTACTATT ATTCTACTATAGGCACTAGTGTATACTCCTCCTACTAATCATAATTTATA TTTAATATTTGATATGAGTGAGTGAATGGAATCACTCTTCTTTCCCTTGG TACTTAAGTCTCTAGTCTGAGTATGGATCTAAAGAAAGGAGCGGATTTGG GAGATCTTCTTCCCCAATTTATTAGTCAAGTAATTGTATGATTCAATCCC AACATTCAGTCACTTATTTTCAGTTATTTCATACTTATGTAGAATGAATC CTCCAAGGAATTTGATTTGGAGTACAAAACTCAAATGTGGGAGCTTATGG TTCAAGAACTGTCTTCTACTAAAGTTCCTTCCTACCATGAAGAAGCACTG AAGTCATTAAAAATTCTTAGGTAACTTCTAAATTGTCCCAAAGTTAAATC CAAAAATCATTTGCTTTCGTTATCATTCAAAGTTTTTAATTTTTCCTATA ATTTATTTCTATTTATAGCCGAGATAAACAAAATTTAAATGAGCTTATCA AAGAGGAAAGCATTGGGGTCCTTCTTAAATACGGACTAGAATTGCCATAC AAGGAGTCCCAAATTCAAGCATTGAGTTGCTTAAATAATCTCCTACTTCA AAATGAAAAAACATCTGCCATTTGTTCAAACTCTCCAGTCCTCAAATCGA TTTTGCATAAAATTGAGGTCTCTTACTCCTCCGATGAAAATAAAGATAAT CCACCTCTACAGCACCTCCTTGGAATTACTGTAATCATAACCATACTCAA ACCCATTGCAAGAGAAATCATAGTTAAAGAGTGTCGAGGCAATGAGATTC TATTGAACTTGTATGAATTCCTTCTATACAAAGACAAGTCCAGTAATAAT GTGGGGGTACTCTGTGAAACGAGTAAGCTCTTGTACAATATTTGGCTTCT CGCAAATGGAGATAACTCCAAGGATCAATATGAAAGAGGAGTCAACCTAA TAAGAAATGTATTTACAACATTTGGATCTCACCCCGAGAAGGAAAAGATT ATTAAAAATAGTATTAACTTACTCTCTGCTATCCCTCCACACTTATACAG CAATCTCCTCATCGTTTCGTCTGAAGAGGAAGTATCAATGACAGTGCCCA AGGAGTGCTTAAACTATTTACTTAGTCATTTAGATGACGTAAGAAATTCG TTTAACTTGACATTTTTTTGTTCTCTTTAATATACACTCATTTATTTTTT TAAAGGATGAATTGGAATTGGAAGAGAGTATCTCACCAACTCTCATGTTC TTATGTCAATTTTCAAGACAAAATCGAAATGTCAGAAAGTATTTAAGAAG GGTTATTTTACCCCCCCTCAAGGCTGTTCAAAATCGTCCTGAGATTGGAA ATGAACCTAGAAATAAGCTTTGTAAGCTCCTCACTTCTCCTACTACAAGT ATAGAAACACTTTCTTCTGAATTTTTATTTGTTCTCTGCAAAGAACAAGG TAATGTTTGAGTCAGTCCAGTACTTATTACTGTACATATAGCTAACTTTT TATCCCGCTTAGTTGATAGAATGGMCAAATACACTGGTTTTGGCAATGCT GCAGGCTTATTAGCTCGCAAAGGTCTACTAAATAGAACAGGAAGAAATAC GGATTACTCAGATGAAGATTCTGAAACTGAAGAATATGTATCTAATTCTC ACAAAATAAACCCAGTTATAGGATGCATTGACAAACCACGTCCTTCTCCA TTTGAAGGTATGTCTGAGGAACGGAAGGAGMATGAAGCCATGAAACTAGT CAGTCTAATCGACAAACTTAATGGACAAGGGTTGATCCGTCCAGCAATGC CAGGCCCAGACGGACAACCTGTTCCAGTTGATCATATGATGCAGATTACT GAAAGAATCCAGGCACAAGACTTATCAAATGACGAAAGCGACTAGACTTA TACACTTAAGGGAGTTCGTTAAAGACGATTTTTAAAATTTTATCTTAACT TTACTCATGCAAGATTATTTTAATTTGAAGCATAATGTATTTTATACATT GAGAATTAAAGATGACGAAATAATATATCAACCATTCCATTGAATTTTCC TATTCCCTGATCCAAGTTGTTGCAAGAAACTCAAAATTCAATTATAGAGC GACGATCCTCAGTCTTACTTCTATTTTAATGTCCAAGTCCTTTACAAACA CTATATCCTTTTCATTGAGACAACACGTCGAATCCCTAACTGTCGATACG ACGGCAATATAATTCAACAGATTAACTTCCTGTTTTTTCTTCTTCCATGA TTAAGATTTTAAGCCGTGTGTTGGGTCCTTAGATCATTCATAACGGGCGC AATAATTGATAGATTTTAGTTAAAGCGACCAGTCGTCATAAATTTGATAA ATAATGCATCTTTGATATATACAAGGAATAATGTTTACCAATATAATAAC CCTGTTGAAAATGTAATAGTTTTCATTAATTTATTAAGATTTAAGATGAG TTGGTTTTTTTCAGTTTACAAATTATTAATCAGAGTGATTTTAATCGTTT TAATATGTTATATAAGAGATGAGCATAGATGGTTGTTTGTTTTAACAGTG TCCTCGGTCTACATCTCTTTTGCGAGGCGCAGCCTTAATGATATCATCGK CCCTGACGATCATTTCAGCTGCCTCAGAAGCAGATACAAGTACTTGATGC TTGACACTAAATGACTCGGTGATACCCAAGTCCTTCATATTTCCAACAGA CCCCTCATTCATGTTAAGTCCCATCTCTTTGTTTCCTTCGGTATGAAGAG CTCTAAGTTCGGAAACGAGTTGGGCAGCATCATATCCACCATTCTCAGCA ATAATGGAAGGTAGTTGACGTAAAGCGTGTGCGAAGGACTCCATGGCTCT GGACTCTTTTCCAGGTGTTTTAGCGGCAGSTTCCATAACAGCWTTTGCCA TTAACATTTCGCTACAACCTAAGAAAAGTCATGAGATTAGTACAAATTTA TCAAATGGGAAGATAATATAATAATCACCTCCACCGTAGACAGTTCTCGT TTCTTTGACAGTTGAGGTAAGAACGCAGAGAGCATCATGTAAAGATCGCT CAGCTTCTCCAATAATTTGCTCTGTTGCACCTCTGATGATGATTGAACAG GCTTCTCCAAGTGGGACACCACTGAATTTCAAGAGGTTTTCTTCACCAAT CATGACTTTTTCAATGAGA
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