EMLSAT00000000670, EMLSAT00000000670-696517 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000670
Unique NameEMLSAT00000000670-696517
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1106supercontigLSalAtl2s1106:171306..172493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000670 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000670EMLSAG00000000670-683436Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002916EMLSAE00000002916-711844Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773828auto773828Lepeophtheirus salmonispolypeptide
EMLSAP00000000670EMLSAP00000000670Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000670

>EMLSAP00000000670 ID=EMLSAP00000000670|Name=EMLSAP00000000670|organism=Lepeophtheirus salmonis|type=polypeptide|length=395bp
MHLLEVKNFYISVVRLYYPPLNNSSPNSSQKGNMYRKVVAFCAIVANVYG
DXPPLRYNEPPSVSSSGYNTPGQYNIPALIPNTLHNVANAELQANNGILN
GQYKIKLDNGKVLTVSYFIEEPSGHGDDSTNEEASAGPSYVVPSIPTPIP
SGYGAPRAXATIEDSYGSPVFSTPVPPHSTYDAPTPHAPVDSSYGAPVVP
SNGAQSTPDARVXADSSYGAPVAPSYGVPSTSAPRAAANSQYGAPVAPSY
GAPSTPVPRAAAESSYGAPSVSAYDSPAESSYSGPAESSYGAPAESSYGA
PAEPSDGAPAESSYGAPAESSYDSPAESSYGAPAESSNDAPVDSSYGAPA
KPTPAVPSYGSPVEPAAPSYGIPRAAAFPSYGSPAPQPEYLPSYV
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mRNA from alignment at LSalAtl2s1106:171306..172493-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000670-696517 ID=EMLSAT00000000670-696517|Name=EMLSAT00000000670|organism=Lepeophtheirus salmonis|type=mRNA|length=1188bp|location=Sequence derived from alignment at LSalAtl2s1106:171306..172493- (Lepeophtheirus salmonis)
ATGCATTTATTAGAAGTAAAAAATTTCTATATAAGCGTTGTTCGACTTTA
TTATCCACCACTCAACAATTCAAGTCCAAACTCTTCACAAAAAGGGAATA
TGTATCGAAAGGTTGTAGCATTTTGTGCTATTGTGGCAAATGTATATGGA
GACAMCCCACCATTAAGATATAATGAACCGCCTTCAGTATCATCGTCTGG
ATATAATACTCCTGGTCAATATAATATCCCAGCTTTAATTCCAAATACTT
TACATAATGTTGCCAATGCTGAGTTACAAGCTAACAATGGGATTTTAAAC
GGACAATATAAGATTAAGCTTGATAACGGAAAGGTATTAACTGTCTCTTA
CTTCATTGAAGAACCAAGTGGACATGGTGATGATTCTACAAATGAAGAAG
CATCAGCAGGCCCCAGTTATGTGGTCCCTTCCATTCCAACTCCTATTCCT
TCAGGTTATGGTGCYCCAAGAGCTSCTGCCACTATCGAGGATTCATACGG
CTCTCCTGTTTTTTCTACACCTGTACCACCCCATTCTACTTACGATGCTC
CAACTCCTCATGCTCCTGTTGATTCATCCTACGGCGCTCCAGTAGTACCT
TCCAATGGGGCTCAATCCACTCCAGACGCACGTGTASCTGCCGATTCATC
ATATGGTGCTCCTGTGGCACCTTCGTATGGAGTTCCATCAACTTCAGCTC
CACGTGCTGCCGCCAATTCCCAATATGGTGCTCCTGTAGCACCTTCTTAT
GGAGCTCCATCAACCCCAGTTCCACGTGCTGCTGCTGAATCATCTTATGG
GGCTCCTTCTGTATCAGCATATGATTCTCCTGCAGAATCATCCTACAGCG
GTCCTGCAGAATCATCTTATGGTGCTCCTGCTGAATCATCTTATGGCGCT
CCTGCTGAACCATCAGATGGTGCTCCTGCTGAATCATCATATGGTGCTCC
TGCTGAATCATCCTATGACTCGCCTGCTGAATCATCTTATGGTGCTCCTG
CTGAATCATCTAATGACGCTCCTGTTGACTCATCTTATGGTGCTCCAGCA
AAACCCACCCCTGCAGTACCTTCTTATGGATCCCCTGTTGAGCCTGCAGC
CCCATCTTATGGAATTCCACGTGCTGCTGCCTTTCCATCATACGGATCTC
CTGCCCCTCAACCTGAATATCTTCCTTCATATGTCTAA
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