EMLSAT00000000675, EMLSAT00000000675-696522 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000675
Unique NameEMLSAT00000000675-696522
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1107supercontigLSalAtl2s1107:244535..247264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000675 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000675EMLSAG00000000675-683441Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002926EMLSAE00000002926-711854Lepeophtheirus salmonisexon
EMLSAE00000002927EMLSAE00000002927-711855Lepeophtheirus salmonisexon
EMLSAE00000002928EMLSAE00000002928-711856Lepeophtheirus salmonisexon
EMLSAE00000002929EMLSAE00000002929-711857Lepeophtheirus salmonisexon
EMLSAE00000002930EMLSAE00000002930-711858Lepeophtheirus salmonisexon
EMLSAE00000002931EMLSAE00000002931-711859Lepeophtheirus salmonisexon
EMLSAE00000002932EMLSAE00000002932-711860Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775192auto775192Lepeophtheirus salmonispolypeptide
EMLSAP00000000675EMLSAP00000000675Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000675

>EMLSAP00000000675 ID=EMLSAP00000000675|Name=EMLSAP00000000675|organism=Lepeophtheirus salmonis|type=polypeptide|length=671bp
MSSQCDSPQAGSVVEGMTYAVAAAXSEMKKXGXXAASMDDTTLTNATTTT
TTTSNEEHSQDGSTDQHLKKEEHDPEPEEESDDDEEILEESPCGRWSKRR
EEVKYRDVPGVDAAFLAMDNEEGVEXXWNEASFSEAKKFKAQEDKLKKVF
EALTLIDHPNIVKFYRFWTDSGKHHSSSSKSSINNTNKVVERENKAEVSG
GGGTSSTHGNAFPENVTSSSNTEAPSSLSEASSKVLINSSGSNVKSESNV
SVPEVHPSTNLSASTNASVDKNEKKHSVLKNKPRLIFITEYMSSGSLKQF
LRRTKKNARKTQLTSWKRWCVQILSALRDNIKNLHYLAPEYGESNFIPPT
TAMDIYAFGVAXLEMAALEITMNEDTVGVISDEAIKKTIESLEDENQKDF
IRQCLSPNPLDRPSISDLLFHPVLFEVHACKLLAAHKLVNLPVNINETMN
DKAIQAHYGEDSTLATVVKDGKLREFKLKDFPGTEKLEKFIEDVKNGIYP
ITAFGQKKVYEPSEPAIQNKSSPELTESPAVNVSGTSSEYEPELRRCHLI
HTTIYFTPELKEFHMSLLLKLEDAMNRQLYCPITPGESAIALSEELVYNA
FINEADFLILTQVLEDCLRKLSVASVEESVNIPEHEMIPGERGEPPKTVV
AETILHTVXPDXQPIPVTINS
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mRNA from alignment at LSalAtl2s1107:244535..247264-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000675-696522 ID=EMLSAT00000000675-696522|Name=EMLSAT00000000675|organism=Lepeophtheirus salmonis|type=mRNA|length=2730bp|location=Sequence derived from alignment at LSalAtl2s1107:244535..247264- (Lepeophtheirus salmonis)
ATGTCGTCCCAATGCGATTCCCCACAAGCTGGATCCGTAGTAGAAGGTAT
GACCTATGCAGTAGCAGCTGCTGSATCCGAGATGAAGAARAAKGGARAAR
AAGCCGCTTCAATGGACGATACGACATTGACGAACGCAACGACGACGACG
ACGACGACTTCGAATGAAGAGCACAGCCAAGACGGGAGCACGGATCAGCA
CTTGAAAAAGGAGGAACATGATCCTGAACCTGAGGAAGAATCAGATGATG
ATGAAGAGATTCTGGAAGAGTCCCCCTGTGGGCGGTGGAGCAAGCGTCGG
GAAGAGGTGGGGCATTSATTGTCTTTTCCTTGTTGATTAATTACTTACTT
AATGTATTGTCACTGATTTAGGTAAAGTACAGGGATGTACCCGGTGTGGA
CGCTGCATTTTTAGCCATGGATAACGAAGAAGGKGTTGAGGKGGKCTGGA
ATGAAGCGAGCTTTTCAGAGGCCAAAAAGTTCAAGGCTCAAGAGGATAAA
TTGAAAAAAGTCTTTGAGGCTCTCACACTCATTGACCATCCCAATATTGT
CAAATTCTATCGTTTCTGGACGGATTCTGGAAAACATCACAGCAGTAGTT
CAAAGAGCTCTATCAACAACACCAATAAGGTAGTAGAGAGAGAGAACAAA
GCCGAAGTTAGTGGTGGAGGAGGAACCTCCTCCACCCATGGAAATGCATT
TCCAGAAAATGTAACATCCTCTTCTAATACGGAAGCTCCTTCATCACTCT
CTGAAGCTTCTTCCAAGGTTTTAATTAATAGCTCCGGTTCAAACGTCAAG
TCGGAATCAAATGTCTCTGTACCAGAAGTGCATCCAAGTACTAATCTCTC
CGCATCGACAAATGCTTCAGTCGATAAGAATGAGAAGAAACACAGTGTAC
TCAAAAATAAACCAAGACTGATTTTCATCACGGAATACATGTCATCTGGT
TCATTGAAGCAGTTTTTACGACGTACTAAAAAAAATGCTAGGAAAACACA
ATTGACATCTTGGAAAAGATGGTGTGTTCAAATATTATCTGCCTTGAGGT
AGGTACAACTTTCAATATGTGGCCATTTATCATTGAAATATAATTTATCA
TCTTATTTTTTCCATAATATCCAGGTATTTGCACTTAAATTGTAATCCAT
CCATCGTTCATGGAAATCTAACGTGTGACACTATATTTATTCAACATAAT
GGTCTTGTTAAGATAGGCTCTGTTGCCCCTGATATTATTCACAACAACGT
GAAGACATGCAGAGATAATATCAAAAACCTTCACTACTTGGCTCCTGAAT
ATGGAGGTTTGTTAAAATATTTTTTATAATGAATTGTAATTTATACCTAC
ATTTGTATATCAAAAATATAGAGTCAAACTTCATTCCTCCAACTACTGCC
ATGGATATCTATGCTTTTGGAGTGGCTGSTTTAGAGATGGCGGCTTTAGA
AATAACGATGAACGAAGACACAGTAGGAGTAATCTCCGATGAAGCTATTA
AAAAAACTATTGAATCATTAGAAGATGAGAACCAGAAGGACTTTATTCGC
CAGTGTTTGAGTCCTAATCCACTGGATCGTCCCTCAATCTCTGATCTCCT
CTTCCATCCAGTTTTATTTGAAGTACATGCTTGTAAACTTTTAGCAGCTC
ACAAGCTTGTTAATTTACCCGGTAAATATTTTTTTTTCCTAATATGTATA
TTTGTTCATGACACTAATAATATAAATATTTTTTTCCCTTTTTTTTTAGT
AATTTGACACTAGTAAGTTTATTAATAGTTTAAATCTGTGTTTTCTCTCT
CTCTCTCTCGTAATGAATAAATAGGTTATATTATCTCATCCCTTCTGCTT
TGTCTCTTACCTATACTTCAGTTAATTTATTTCTATTTCTTCTTTATTCT
AATTTTTTCCTTTAGTTAACATTAATGAGACAATGAATGACAAAGCTATC
CAGGCGCATTATGGAGAAGACAGCACTTTAGCGACAGTTGTCAAAGATGG
AAAACTCAGAGAATTCAAACTTAAAGACTTTCCAGGTACGGAGAAATTGG
AGAAATTCATTGAGGATGTAAAGTACGTATAGAATATTTATAAGGAAAGA
ATAATTAATTAACTTGCTTTTTATGAAACAGAAATGGCATTTATCCAATA
ACTGCTTTTGGACAAAAGAAGGTATATGAACCATCTGAGCCAGCTATTCA
GAATAAGAGTTCTCCAGAATTAACTGAGAGTCCTGCAGTGAACGTTTCTG
GCACATCATCTGAATATGAGCCCGAATTGAGACGTTGCCATTTGATTCAT
ACTACAATATATTTTACTCCAGAATTGAAAGAATTCCACATGTCATTACT
TTTAAAACTGGAAGATGCGATGAATAGACAATTATACTGTCCTATCACGC
CTGGGGAGTCTGCAATTGCTTTGTCAGAAGAGCTAGTCTATAATGCGTTC
ATTAATGAGGTAAATCTTTAGTATATTGATTTTTTTATTTTGTAAATAAA
TAATCTATCTAATTCATTATTCATAGGCGGATTTTCTGATACTTACGCAA
GTTTTGGAAGATTGCTTACGAAAATTGTCAGTTGCATCAGTGGAAGAGAG
TGTTAATATTCCAGAGCATGAGATGATACCAGGAGAACGAGGAGAACCCC
CAAAAACTGTAGTTGCCGAAACTATATTGCACACTGTGAMCCCGGAYCAS
CAGCCAATACCCGTCACTATAAACTCATAA
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