EMLSAT00000000678, EMLSAT00000000678-696525 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000678
Unique NameEMLSAT00000000678-696525
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1107supercontigLSalAtl2s1107:261868..262668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000678 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000678EMLSAG00000000678-683444Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002938EMLSAE00000002938-711866Lepeophtheirus salmonisexon
EMLSAE00000002939EMLSAE00000002939-711867Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775497auto775497Lepeophtheirus salmonispolypeptide
EMLSAP00000000678EMLSAP00000000678Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000678

>EMLSAP00000000678 ID=EMLSAP00000000678|Name=EMLSAP00000000678|organism=Lepeophtheirus salmonis|type=polypeptide|length=246bp
MGKKRKLEREEAEEAAAKKQKTPLDSGIKEVSRLASKKEGRLIVILYAAH
LEIIKSDKKSFDLLNSDQHTGFIRKTGRQLTDCRPDITHQCLLMLLDSPL
NRAGLLQVYIQTAKNVLIEINPQTRIPRTFKRFSGLMVQLLHKFSVRASD
SGGLKLLKVIKNPITDHLPPGIRKICMSFSSKEVVKPADIIPKNPEPICV
VIGAIAKGAINPDYTDQDLRIGNYPLSAALTCTKITSAFEEAWGVF
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mRNA from alignment at LSalAtl2s1107:261868..262668-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000678-696525 ID=EMLSAT00000000678-696525|Name=EMLSAT00000000678|organism=Lepeophtheirus salmonis|type=mRNA|length=801bp|location=Sequence derived from alignment at LSalAtl2s1107:261868..262668- (Lepeophtheirus salmonis)
ATGGGAAAGAAGCGAAAACTCGAGAGAGAAGAAGCAGAAGAGGCCGCTGC
AAAGAAACAGAAAACTCCTCTGGATTCTGGGATCAAGGAAGTGAGTCGTC
TTGCATCCAAAAAAGAGGGAAGACTCATTGTAATTCTCTATGCTGCGCAC
TTAGAGATCATCAAGTCGGACAAGAAATCCTTTGATCTTCTCGTAGGTTA
CTCTGTGTTAATTGTAATGTCCTTGGCCTAATTTTTATTTTTCAATTTCC
AGAATTCGGATCAACACACGGGTTTTATTCGAAAAACTGGCCGACAGCTA
ACGGATTGTCGTCCTGACATAACACATCAATGTCTGCTCATGCTCCTAGA
TTCACCCCTAAATCGAGCGGGTTTATTGCAAGTCTATATACAAACTGCTA
AAAACGTTCTCATTGAGATTAATCCCCAAACTCGTATTCCAAGGACCTTT
AAACGCTTTTCAGGTCTTATGGTACAACTTCTCCACAAGTTTAGTGTGCG
AGCAAGTGATTCCGGTGGACTTAAATTACTCAAAGTCATTAAAAACCCCA
TCACAGATCATCTTCCTCCAGGGATTCGTAAAATTTGTATGAGCTTCTCT
TCTAAAGAAGTGGTCAAGCCTGCAGATATCATCCCTAAAAATCCTGAGCC
CATTTGTGTAGTGATTGGGGCTATTGCTAAAGGAGCAATTAATCCTGACT
ATACAGATCAAGATTTAAGAATCGGCAATTATCCACTGAGTGCTGCTCTT
ACTTGTACTAAAATTACTTCTGCCTTTGAAGAAGCCTGGGGTGTCTTTTA
A
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