EMLSAT00000000680, EMLSAT00000000680-696527 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000680
Unique NameEMLSAT00000000680-696527
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1107supercontigLSalAtl2s1107:269908..271364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000680 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000680EMLSAG00000000680-683446Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002943EMLSAE00000002943-711871Lepeophtheirus salmonisexon
EMLSAE00000002944EMLSAE00000002944-711872Lepeophtheirus salmonisexon
EMLSAE00000002945EMLSAE00000002945-711873Lepeophtheirus salmonisexon
EMLSAE00000002946EMLSAE00000002946-711874Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775615auto775615Lepeophtheirus salmonispolypeptide
EMLSAP00000000680EMLSAP00000000680Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000680

>EMLSAP00000000680 ID=EMLSAP00000000680|Name=EMLSAP00000000680|organism=Lepeophtheirus salmonis|type=polypeptide|length=217bp
IHPHDAKSWDEETESELLDILRNPECVAVGECGLDFNRNFSPPDVQLKVF
EKQVKMACDTGKPLFLHERDAHSEVVEILRRYKERLPSAVIHCFTGKKDE
AETYLQMGLYIGLTGYLWKDKSENGVRKILEDKIIPLDRLLVETDAPFMY
PNTRASKLPQNIKDSLTDRXRYCTFQRNEPCSLPVTIEMISAYLKKTPEE
IALATTINALKLFGLSG
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mRNA from alignment at LSalAtl2s1107:269908..271364-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000680-696527 ID=EMLSAT00000000680-696527|Name=EMLSAT00000000680|organism=Lepeophtheirus salmonis|type=mRNA|length=1457bp|location=Sequence derived from alignment at LSalAtl2s1107:269908..271364- (Lepeophtheirus salmonis)
ATACATCCACATGATGCTAAGAGCTGGGATGAAGAAACTGAGTCAGAATT
ACTAGATATACTTCGTAATCCAGAGTGTGTTGCAGTTGGAGAATGCGGCC
TGGACTTTAATCGTAATTTCTCACCTCCAGACGTTCAATTAAAAGTATTT
GAAAAGCAGGTGTGTGTCTCTCAAGATATTTTTATCGTTTATTTTGGTCT
TATTTTTGACCTTGTTAAAAATATATTTCAGGTAAAAATGGCTTGCGATA
CAGGAAAACCACTTTTCCTCCATGAAAGAGATGCTCATTCTGAAGTTGTT
GAAATACTTCGTCGCTATAAAGAGCGATTACCCTCCGCTGTCATTCATTG
TTTCACCGGTAAAAAAGATGAAGCGGAAACTTATCTTCAAATGGGGCTTT
ACATTGGACTCACAGGTTGGTATTTGCATGTACTTATACAGGGGCGTAGG
AAGTGTTTTCATATTTAAATATTATTTGCCCTTTCGCCGAGTAAAACAAC
TCAAATCCCGTCAAATAATGTCATAATTATCTGAAGATTGAAATTCCTGT
TCTAAATTATAAGTCAATGAAAAATGTCGTATAAAGTCCAAGAAAACAAT
AAAATATTTTTTCCTACTTAAAAAGTAATTTTTTTCGCTTTGTATTTATA
AATATTACAATGCAATCTTATTGGCAATTATTTGTTTTCTACGTTTATCA
CCCAAGAAATTAAAATTGCATTTTTGCGGATTATATTTAGAAAGGAAATA
AATTAATGATTATTTTTCTGAAGATTTTTATCAATTGAATAATAACAACT
GTTTTATTTACTTTAAATGTCAAAGTGAGAAGAAATATTCATTTAAAAGA
ATTACACATTTTCAATTAGAGTAGATACGTGAATTGTAAACAGCATTTAA
TTTCTAACCCTAATTCAAATTTGTTCATTATAAGTGAAAATAAATGGAAT
TGTGTTTAAAAAAAGTGATAAAAGCAAAATATGTTTGGGATCAAAAATTC
CCGCGGTTCTTACGCCACTAATAAGTTGCCCTTGAGGTTTTTTTTATAAA
TACATTCATATTCCATTTTTAGGGTACTTGTGGAAAGATAAGTCAGAAAA
CGGAGTTCGCAAAATACTAGAGGACAAAATTATTCCTCTAGATCGTCTCC
TTGTTGAAACGGATGCACCTTTCATGTATCCCAATACACGGGCATCGAAA
TTGCCCCAAAATATAAAGGATTCCCTCACGGATAGGMAAGTAAAAATGAC
TTTAATGCAAGTTCGATTCCTAGTATTATTTAATTTCCTTATTGCAGGTC
CGTTACTTTCCTTCAGCGTTACTGCACTTTCCAACGTAATGAGCCTTGCT
CCCTACCAGTTACAATTGAAATGATATCCGCATATCTCAAGAAAACTCCT
GAGGAAATAGCCCTTGCTACCACAATCAACGCTCTGAAGCTTTTCGGTCT
GAGTGGA
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