EMLSAT00000000684, EMLSAT00000000684-696531 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000684
Unique NameEMLSAT00000000684-696531
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1108supercontigLSalAtl2s1108:60699..62165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000684 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000684EMLSAG00000000684-683450Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002967EMLSAE00000002967-711895Lepeophtheirus salmonisexon
EMLSAE00000002968EMLSAE00000002968-711896Lepeophtheirus salmonisexon
EMLSAE00000002969EMLSAE00000002969-711897Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771011auto771011Lepeophtheirus salmonispolypeptide
EMLSAP00000000684EMLSAP00000000684Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000684

>EMLSAP00000000684 ID=EMLSAP00000000684|Name=EMLSAP00000000684|organism=Lepeophtheirus salmonis|type=polypeptide|length=428bp
MMRDANKEVHNFILKGNFYHIAIVKHSIPSSPFVLLSLTFYYSLLSISRC
MFSDSVEKSSSMEKNSKTNDETFFFTSESVGEGHPDKMCDQISDAILDAH
LAQDPDAKVACEVVTKTGMVFVFGEITSNAKDINYQKIVRNVVRDVGYDH
TDKGFDFKTCCVLICLETQSSNIASGVWKGHTDEDLGAGDQGIMFGYATD
ETEEAMPLTLMLAHKLNKKVADLRRSGELPWARPDTKAQVTCEYAIKDGA
CVPLRVSAIVLSVQHCPDTPRERIIDDLTKKVITSTVPERYLNNNTVLKI
NPCGRFVVGGPQCRAGLTVDRSGAYAVRQVAKSLVKSGICKRCLVQVSYA
IGVAHPISIAIFDYSTSDKTQEELQEIVKSNFDLRPGIIAHNLDLKKPIY
LETAKYGHFGKDGLSWERTIDLREKVKH
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mRNA from alignment at LSalAtl2s1108:60699..62165-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000684-696531 ID=EMLSAT00000000684-696531|Name=EMLSAT00000000684|organism=Lepeophtheirus salmonis|type=mRNA|length=1467bp|location=Sequence derived from alignment at LSalAtl2s1108:60699..62165- (Lepeophtheirus salmonis)
ATGATGAGAGACGCCAATAAAGAAGTACATAATTTTATACTAAAAGGGAA
CTTCTACCATATTGCTATTGTTAAACACAGTATTCCTTCGTCTCCATTTG
TTCTTCTGTCACTTACTTTTTACTACTCACTATTGTCTATCTCACGTTGC
ATGTTTTCAGATTCAGTAGAAAAAAGTTCGAGTATGGAAAAGAATTCAAA
GACAAATGATGAAACTTTTTTCTTCACATCGGAATCGGTTGGTGAGGGCC
ATCCCGATAAAATGTGTGATCAAATATCCGATGCTATTCTGGATGCACAT
TTAGCCCAGGATCCGGATGCAAAGGTGGCTTGTGAAGTTGTCACAAAGAC
GGGAATGGTTTTTGTTTTTGGGGAAATCACTTCCAATGCCAAGGACATTA
ACTATCAAAAGGTGTAGCATAATGAGCAAAGTTAATTGACTATTTTATGG
GCATGTTAACATATTTATTATAATATGCTGTATACTATTCTATGTATTTC
AATCCCATAGATTGTACGGAATGTAGTAAGGGATGTGGGCTATGATCACA
CAGATAAAGGATTTGATTTTAAAACTTGTTGTGTTTTAATTTGTCTTGAA
ACACAGTCTTCAAATATTGCTTCTGGTGTTTGGAAAGGACACACGGATGA
GGATCTTGGTGCTGGAGATCAAGGCATTATGTTTGGTTATGCAACAGATG
AGACAGAAGAGGCAATGCCTCTAACTTTAATGCTTGCACACAAATTGAAT
AAAAAAGTTGCCGATCTTCGGAGATCAGGAGAATTGCCTTGGGCTAGACC
TGATACCAAAGCTCAAGTTACTTGTGAATATGCTATTAAAGATGGGGCAT
GTGTTCCTCTACGTGTGTCCGCTATAGTTCTTTCCGTGCAACATTGCCCT
GATACACCAAGAGAAAGGATAATAGACGATCTCACGAAAAAGGTTATTAC
GTCGACTGTTCCAGAACGTTATCTAAATAATAACACTGTTCTTAAAATCA
ACCCCTGTGGAAGATTTGTCGTTGGGGGTCCTCAATGTAGGGCTGGCTTA
ACGGGTAGAAAAATGATTGTCGATAMGKATGGRGGKTGGGGAGCTCATGG
TGGAGGGGCTTTTTCGGGAAAGGATTATACAAAAGTTGACCGCTCTGGAG
CTTATGCTGTTCGACAAGTAGCAAAATCATTAGTCAAATCTGGAATATGT
AAGAGATGCTTAGTCCAAGTGTCTTATGCCATTGGAGTAGCTCATCCTAT
ATCCATTGCTATATTTGACTATAGTACAAGTGATAAAACTCAAGAAGAAC
TTCAAGAAATTGTCAAGTCAAACTTTGACCTCAGGCCAGGAATCATTGCA
CACAATTTGGACTTGAAAAAGCCTATTTATTTAGAAACTGCCAAATATGG
TCATTTTGGGAAGGATGGACTTTCATGGGAAAGAACTATAGATTTGAGAG
AGAAAGTGAAGCACTAA
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