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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1110 | supercontig | LSalAtl2s1110:63947..69432 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000715 >EMLSAP00000000715 ID=EMLSAP00000000715|Name=EMLSAP00000000715|organism=Lepeophtheirus salmonis|type=polypeptide|length=313bp
MESLQKGFLSLLNASNPSHHEPFLEWLRISLPDMIRTVSPAPAANTIKPV
IRLQLREISNDIRAHLPLEAVMPSESIHHPDSEDFLHLDAFLYDEEDEEK
LVEDGKLPKQICGDCGSKNTRQIKLITHSCSKDLLEYIFRNLLPLGLEGK
TIVDVGSRLGAVLYGAYFFSNASKIIGIEMNPDLCVLQEQIINKYKLGNR
VQVVRGEMTTLPEVFNSADVVILNNVFDWFMSPELQVKMWLFLRSVIKPG
SLIVTVPSLQESLQHLPTGIVLETWVRQLNPALPMPHGIDEYEDEPIAKV
QMYQVIQNTPLMG back to topmRNA from alignment at LSalAtl2s1110:63947..69432- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000715-696562 ID=EMLSAT00000000715-696562|Name=EMLSAT00000000715|organism=Lepeophtheirus salmonis|type=mRNA|length=5486bp|location=Sequence derived from alignment at LSalAtl2s1110:63947..69432- (Lepeophtheirus salmonis)
ATTGGAAACATGGAGAGTTTGCAAAAGGGGTTTCTATCATTACTCAATGC
GTCGAATCCTTCACATCACGAGCCCTTTTTGGAATGGCTTCGCATCTCCC
TACCAGATATGATTCGCACCGTTTCTCCTGCMCCTGCAGCAAACACGATM
AAGCCTGTAATACGTCTTCAACTCAGGGAAATTTCCAATGATATAAGAGC
ACATTTGCCGCTTGAAGCCGTTATGCCTTCAGAGTCCATCCATCATCCGG
ATTCTGAGGATTTCTTACATTTAGATGCCTTTTTATATGATGAAGAGGAT
GAAGAAAAGCTTGTGGAGGATGGAAAGCTTCCAAAGCAGATCTGTGGGGA
CTGTGGCTCTAAAAATACCAGACAAATCAGTGAGTATATCGAGCATTATT
CGTTATGCATTATTATCGTCTGCATACTTTGTGACCAGGATAAGTACATC
GGTCCTTATACTTAAGTCCTACAACTTAGTGCTTATTAGTGAGTTGTCAC
GAGCAAAACTCGTAAATCGGTACTCGAGTTTTATGAAGTAAATAAAGAAA
CACAAAAAACTCGGCTCGTGGGCATAAAAAGCAGAGTATTACTCGGAATT
TGAACGTAAAACGTAAAAACTTGGAATTCTTTTTTTTTTTTACTTTTTCG
AGCCCATTATAACATGTAAATCTTCCTAGAATTACTTACTTTCTTGGCAA
AATTTAGAATTTATGTTTCCTCACATTTAGAACTGTGTTGATTTTAATGC
TATGTGTACTCATAATCCCAGTTCGTTTTAAAATAATATTTCTTTGATTT
TTTAAAGACTAGCAAGAGGACTCGACATTGCTTGGAATTACTTAAATCTC
TATTTTTTCTATATAGTATCATTAATATGCATTCATATTAATAATCATCG
GTGCCGCTAAAAACATATCTTATCGAAGTTATAACCAAACTATAGTAAAA
TATTGACTAATGAACTGTTGAATTACGCTTATGGCTAMGATTCAAATAAR
TTAAAAMTAATTTTTAGATCAATCAGTCGAACATAAATTACAAAAACAAT
TTTCTGTGGTCATCAGTACCTTATATTCAATCTAGGAATAGATCCTTTTA
TACATATGTACAAATATAGTATATTCAATCACGAATACAATAGTTCTCTA
GAAAACCACACAGTTTTTTAAATGACAATTTTCAATTATTCAGTAAAAAA
TATGATGTTTATGACTGACGAGTTTTTTAGGTAGCAAAAAGTGTAAGTGT
GTGTATCGAGTGTTCAGCCAAGTGACGAGTATGCAAGCGAGTAAGGAGTT
AAACTCATAATTCCTCGAGTATTTTTTTTAGAAACTCGAAAATACTCACG
TAAAATTCAGCTTGCGTACATCACCGGTGCTTAAAGTGTTCAAGAAATAC
GAGTACGGATACTTGGTGCTGTGACAGTACTTTATTATTTGGTCTAGTCC
GGTTAAGTCTTAGGACTGAGCTGGGCTGGGCCGAGATTGAATTGGACGGG
ACTGAGTTCTAAATAAAGACCGACACTAAGCTGATCTCCTAGCAAACATT
CTTTAATTGTCAGGATTACCACGTTATTTTTTGTTTTTTATTATTATTCA
TTGTGGCAGGRCATATTTCATKCATTACTGCTTTAAAATATTTTTTCGGC
CCATTCCAGTCTTAATACCGGTCTTATCTCTGCTTAGGACTGTCAAGATT
ACAGATGATTTAAAAAAAAATGAAATAATGACGTCATCAATGACCGAACT
TTATAAGTTTTTAGAACGTATCTAGACCGGACCTAGACTGAATTGGACGG
GACTGCAGTCTTCAGCAGTCCTAAATAACTCTACTTTAATTAACTTTGGA
CTGAACATTATATTTTTTGGGTGACGGGCCGTATGTATATCTTGTTGATT
AAAATAGTTTTTAAAAAATTTGATAAGAATAAAAAAAGAATCTTCCTGTA
TACTTATAAATAGTGACGTGTCGTAAGCTGAATTTTGCTGCATTAGTAGT
TTCGAGTTTCTAAAAAAACAATTGAGGAATTACGAGATATACTCACCCCA
GCTCTTTTTGCTCGCTAAAAAACTCGTCTTGTCATAAAAATCATATTTTA
TAAATAATTATTGAAAAGTTGCCATTCAATTTTTTTATTTTTTTTATTGG
TAATTTATGTTTTTCAGATTGATACAAAACTTATTTAAATCGTGGTTATA
AACGTAATTGAAAAGTTGATAAAATTAATACATCAAAATATTTTTTGTGG
TAATGATGCTTATTAATATGAATTCATACTAATTAATCATGGCATTCTTG
TTTTTGTAAAAACAAAACGGACGCCCCTGAATTACTGGTAATTTTCCATT
GAGTATAATATTCCGGAGGGCAATATTCCTAGAACTACATATGTAAAGTA
ACATCAGGTAACAATGAATGTTATGCATTAATATTATTTTATTAAAGGAA
AAAAAATAGCTACTAACATTGTTAATTGAAGTTATTACTTTTTTATAAAT
GTAGGAATTTGTTTATGCTCATTGAAATGGCAATATTATAACTTTTATTG
CTCTTATGTGCTGACTGCAAAGCTAATAACTGGATGAAAATAACTTACAT
CTGTAAAGATTTTTATATGTGAAAAACTGTTATAATGTTTACTCTGTGTA
AAAGATAATAGCTAGGGGTAGGTAGTACTAAGTCATATTTTCAAACCCAG
CTTGCCTGTCTTTTTTTGGATGTATTTTAGTCCAATTAAGCCAAATGTGA
AGAAAAAAAATGATTTATTTTTATTTTTGGGGGCTTGCCCCCAAAAAACT
GAAASGAGCCATAATTTCTCCTAAAAATGCATTGCGCCACATTATTTTTC
AATAAAATTGGCTGCAGACCTTCTAGAACGTTGCTTCCAAATAGTATAGC
AGCATTAGTTATTTAAAGTACTAAATGATATGGAAAACAAATGGTACAAT
GAACAGAAGTAGCTTCTTAATATCAGGATTGCTGAAAAAATCGAGATGGG
CAAGAAAAAGAGTCTGTACGCACTAAAGTATCTTCAGCTTAGTGTTTAGG
AGCTTCATCAAATTCTCCACTCCCATCCTGACATGAAAGAGAAGATTGTA
TGAAATGAATTGATGTACTATCACGATACGCACAAGTATGATGTTTTGGA
ATATCCAACTATGTTCAAGGTCAACAAGAACTTACATGAAGAGAGATTAG
TCAACCTTTGTACACTTTTGGCTGGACATGAACCTTCTTATTCTAGTGCC
CCTATTACCAACAAACAGAGATGCTGAGGTAGCTCTCGAATGTAATATGG
CAGAATTTGGAACTGAAGATGATATAGAAATTGAAATTGGAAATTACTGT
GTTACTCTTGTCACTGAGGGTGAATGAAACACTTGGTATATTGCTTCTTG
TGAGAACAGGAATTATGATGGCACATTCCCAATGGATCATCTTGTAAGAG
TGAAAAAGGGTCAATTTGACATAGAAACATCCTAGAAAACCAGACACTAG
ATTTGCACTCAGCCTCTACTCTGTAGTGATGTAGATGGTGAATGGGATAT
TTCACACAACAAATTCATGACATTTTCCCTAAGAAATCATAATGCCATCA
ATTCAATCCTTGAGAAGGATCACTTCAAATGGTTGAATAAAAGTTCTTGA
TCAATTCAATTTTTCTACAAGTATTATGAACATTATTTTGTATTATTAGA
TATTATATGTGTACAACATAGTAACACTGATTTACATGTTATTTTCACAA
TGACCAGTAATACTTTCGATTTGTGCTTATATAAATGCTCAAAATACATA
TTTAGATGTGCAACTAGCTTACATAAGTCATACAAGGAATGAATTTTTAG
GCTGGGGGATGATTATTTTCGTAAAAAAATCAAAAACTAACCGTTTAGTA
AAAAATGGGGTGCTGTTGAACATGTTCTCAAAAATTTATAAATCTACAAA
AGATAGGACAAAACTAATGCTATATTTGGAATCCTTGGCTTGTAATTAGT
AGGAATAGAGTCATCAAACAACTTTTTATGAGTTCTMCAGCCGATTTTAT
TGAGGAATAAAGTGACGCGGTGAATTTTTAGGGGAAACTGGTTTGTTTTA
GTTTTTTAGGGTGCAATTATTATTTTTTTTTTTTTTTCATATTTTGGTTA
ATTGGATTAAAATACAAACAAAAAAAGACAAGCAAGCTGGTTTTGAAAAT
ATGACCCAAAATTCACTCAGTACCGCCTACCCCTATAATATCGTGCATTA
AATTCAGACTAATATTGGAGTATAAGGTTAGGCGTTATATGCTCTTATTG
TTAAACCTTTCTCCTTCTCCAAGTATGTGTTGAATAAAAAAAATCAATTA
TTATCATTCTTAGATTATATGTGCTCTGTCAATGCAAAAGCAGGCTGGAG
TAATTTTTCTTAAAACGTAGCGTGGATTACATTTGTACCCAGAATCTAAT
TATCCCACATTTCTTATTACTAAATTATTTTGATAGATCATTCTAAATGT
CACTTAAAGATCTACAAAATTATCGGTCAGTAATAGAAAAAAAGATAAAA
TAGATAATATTTTAAAGGGGAACTTTAAAAAAATGTTCATAAATAAAATG
AAGGCTATAGCTAATATTCCTATGCATCTCAAACCATCCCACAAAATGAA
GCCCATACTTAAGCGAATAAATCAAATGAAATAATGGGTCATTTATATTT
AGGAAGTAAAATAATTGATAAGCTGGTAATTTCTTTTTTTTATAATTCTT
AATGAAGATAGCTTTTGTCTAGAAACATCCTACATTATGTATGCTGTGCA
ATAATAATATATTTATTCACAAGTTTTTTAAGTGTCTTTAATTATATCAT
TATTATTCCAGAACTCATCACACACTCCTGTTCCAAGGATTTACTGGAGT
ATATCTTTAGAAATCTCTTACCACTAGGACTCGAAGGAAAAACCATTGTA
GATGTGGGATCACGACTTGGTGCTGTCCTCTATGGAGCCTACTTCTTCAG
CAATGCCTCCAAAATCATTGGTATCGAAATGAATCCAGATTTATGTGTAT
TACAAGAGCAAATCATTAATAAATATAAACTTGGGAATCGTGTTCAAGTT
GTTCGAGGGGAGATGACCACACTTCCTGAGGTATTCAACTCCGCAGATGT
AGTTATATTAAATAATGTTTTTGATTGGTTCATGAGTCCGGAGCTCCAAG
TCAAAATGTGGCTCTTTCTAAGGAGTGTTATTAAGCCTGGATCATTGATT
GTTACGGTTCCTAGTCTACAAGAATCACTGCAGCATTTACCAGTAAGGTT
TTTGTTTTTTCACAATTTTTTTTATCTAATCATACATATTTTCAGACTGG
AATAGTCTTAGAAACGTGGGTAAGGCAACTTAATCCAGCTCTTCCTATGC
CTCACGGAATTGATGAATATGAAGATGAACCCATCGCCAAGGTGCAAATG
TATCAAGTCATTCAAAACACACCTCTTATGGGCTAA back to top
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