EMLSAT00000000727, EMLSAT00000000727-696574 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000727
Unique NameEMLSAT00000000727-696574
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1116supercontigLSalAtl2s1116:12706..13290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000727 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000727EMLSAG00000000727-683493Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003143EMLSAE00000003143-712071Lepeophtheirus salmonisexon
EMLSAE00000003144EMLSAE00000003144-712072Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769025auto769025Lepeophtheirus salmonispolypeptide
EMLSAP00000000727EMLSAP00000000727Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000727

>EMLSAP00000000727 ID=EMLSAP00000000727|Name=EMLSAP00000000727|organism=Lepeophtheirus salmonis|type=polypeptide|length=149bp
MKILMILGFLLGSSFGSQYQHPLHSYPSPVFPYHLTPPSQFFASRQPFLH
SNSHPVPYPFPIQTSTPGPIVVVTPVPVFLSPDSIFNSHRDIFSSDSNTG
TNFNKGQFGNNFLNGKVQSTSSTSSPSRFNNPFSNQSPNNKIISSYSSN
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mRNA from alignment at LSalAtl2s1116:12706..13290+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000727-696574 ID=EMLSAT00000000727-696574|Name=EMLSAT00000000727|organism=Lepeophtheirus salmonis|type=mRNA|length=585bp|location=Sequence derived from alignment at LSalAtl2s1116:12706..13290+ (Lepeophtheirus salmonis)
CAATAGTTCACTTAATATATTATAACATGAAGGTAACTATAATCAATGAC
TTTGGATCATATTTCATTTTACCCTTTTTGTTTTCAGATTCTTATGATCC
TCGGATTTCTTTTGGGTTCCTCCTTTGGAAGTCAATACCAACATCCTTTA
CATTCATACCCTAGTCCCGTTTTCCCTTATCATCTTACACCTCCATCACA
GTTCTTTGCTTCACGACAACCATTTCTTCATTCTAATAGTCATCCAGTCC
CATATCCATTCCCTATTCAAACTTCTACTCCCGGGCCTATCGTTGTGGTA
ACCCCAGTTCCAGTCTTTCTTTCTCCAGATTCCATATTCAACTCTCACAG
GGATATTTTTAGCAGTGATAGCAACACTGGAACTAATTTCAACAAGGGAC
AATTTGGAAACAACTTCTTGAATGGAAAAGTCCAGTCTACAAGCTCTACT
AGTTCACCCTCAAGATTTAACAATCCTTTTTCAAACCAATCCCCCAATAA
TAAAATAATATCATCATATTCTAGCAACTAAGGTTAAATAATATTGCTTT
TCTGAATATTAGCAGTTTCATTATATGAAAGGCCT
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