EMLSAT00000000797, EMLSAT00000000797-696644 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000797
Unique NameEMLSAT00000000797-696644
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1136supercontigLSalAtl2s1136:122368..123615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000797 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000797EMLSAG00000000797-683563Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003503EMLSAE00000003503-712431Lepeophtheirus salmonisexon
EMLSAE00000003504EMLSAE00000003504-712432Lepeophtheirus salmonisexon
EMLSAE00000003505EMLSAE00000003505-712433Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772692auto772692Lepeophtheirus salmonispolypeptide
EMLSAP00000000797EMLSAP00000000797Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000797

>EMLSAP00000000797 ID=EMLSAP00000000797|Name=EMLSAP00000000797|organism=Lepeophtheirus salmonis|type=polypeptide|length=371bp
MALSKDFISVLVGRGVSAIGFGLVMPSCGVYIAESCHPKYRGPLLSIVAI
MGALGAVYTFSFVHFISNDWRLLIWTVCWIPLLSLVMLLKLHESPYWLVE
KGYLEEARESMKFYQGGNIETELNSIISLDAKRRVEKSNHDKSTHLFKSF
KEFLHAYKKIGILLLIYQWTGNSSLLSFLSSIFQIIFPHMKNGISSVIMS
ITALISTSLSLFTMRYCRYRILFFVCSLLSMGSSIILATSEYLPSTNPIT
SYVPIIGISGIIFFSNFGVYPVLYATNTEIYPINIKAQGVAASQSLSFIS
ISINAIVFPALNKILTIYKAFWVYAFCSCLLCFYAMFVLPNNEGKQLSES
INDRKKIPKKEKTLEKSSSPC
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mRNA from alignment at LSalAtl2s1136:122368..123615-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000797-696644 ID=EMLSAT00000000797-696644|Name=EMLSAT00000000797|organism=Lepeophtheirus salmonis|type=mRNA|length=1248bp|location=Sequence derived from alignment at LSalAtl2s1136:122368..123615- (Lepeophtheirus salmonis)
ATGGCTCTATCTAAAGACTTTATATCAGTACTGGTTGGCCGAGGTGTGAG
TGCCATTGGATTTGGGCTTGTCATGCCCTCTTGTGGTGTTTATATCGCAG
AGTCTTGCCACCCCAAGTACAGAGGTCCTCTCCTATCCATTGTGGCTATC
ATGGGGGCATTAGGAGCTGTGTATACATTCTCTTTCGTACACTTTATATC
AAATGATTGGCGATTACTCATTTGGACTGTGTGTTGGATACCTCTTTTGA
GTTTAGTCATGCTTCTCAAGTTGCATGAATCCCCTTATTGGCTTGTGGAA
AAGGGCTACCTGGAGGAAGCAAGGTGATTTCATTAACCTTTATGATATTT
TTTTAAACAGCTTATTATCTCCATGATTAATTATAATTGTATAGGGAGTC
CATGAAGTTTTATCAAGGTGGAAACATTGAGACTGAATTAAACTCCATCA
TATCTCTTGACGCCAAAAGACGAGTAGAAAAATCAAACCATGATAAGTCA
ACACATCTCTTCAAATCCTTCAAGGAATTCCTTCATGCCTATAAGAAAAT
TGGGATTCTACTCCTTATTTACCAATGGACCGGAAACTCCTCTCTCTTAA
GTTTTCTCTCTTCCATTTTCCAAATCATTTTCCCTCATATGAAGAATGGG
ATCAGTTCAGTGATCATGTCCATCACGGCACTTATTTCCACGTCTCTCTC
CCTATTCACAATGCGATATTGTCGATATCGTATTTTATTTTTCGTATGTT
CTCTATTGAGTAAGTTCAGCAGTGGTAATAAGCTTTAAAATATTCTATAT
ATGTTCTATATTTGTTATAGGCATGGGCTCCTCCATTATTTTAGCAACCT
CCGAGTACCTCCCGTCTACCAATCCTATCACCTCCTACGTCCCAATCATT
GGTATATCAGGCATCATATTTTTCTCCAACTTTGGAGTCTATCCCGTTCT
CTATGCTACCAACACGGAGATTTATCCCATCAACATCAAGGCTCAAGGTG
TAGCAGCATCTCAGTCCCTTAGCTTCATAAGCATCTCCATCAATGCCATA
GTCTTTCCAGCTCTGAATAAGATTCTGACCATCTACAAGGCATTTTGGGT
CTATGCCTTTTGTAGTTGCCTCCTCTGTTTCTATGCAATGTTTGTACTTC
CAAATAATGAAGGGAAACAGTTGTCGGAATCGATTAATGATCGGAAAAAA
ATCCCCAAAAAGGAAAAGACTTTGGAAAAAAGCTCCTCACCCTGTTAG
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