EMLSAT00000000806, EMLSAT00000000806-696653 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000806
Unique Name	EMLSAT00000000806-696653
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1136	supercontig	LSalAtl2s1136:171985..178909 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000806 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000806	EMLSAG00000000806-683572	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003525	EMLSAE00000003525-712453	Lepeophtheirus salmonis	exon
EMLSAE00000003526	EMLSAE00000003526-712454	Lepeophtheirus salmonis	exon
EMLSAE00000003527	EMLSAE00000003527-712455	Lepeophtheirus salmonis	exon
EMLSAE00000003528	EMLSAE00000003528-712456	Lepeophtheirus salmonis	exon
EMLSAE00000003529	EMLSAE00000003529-712457	Lepeophtheirus salmonis	exon
EMLSAE00000003530	EMLSAE00000003530-712458	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773842	auto773842	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000806	EMLSAP00000000806	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1136:171985..178909-

protein sequence of EMLSAP00000000806

>EMLSAP00000000806 ID=EMLSAP00000000806|Name=EMLSAP00000000806|organism=Lepeophtheirus salmonis|type=polypeptide|length=2038bp
MPPKTTPKRKSKEEWVRDAESGILRHPSLGIFEKEGILSVHESEFQLLDY
LDAKRIRIPFGTPFLLLSPSLMKALLWKFGSRVILIDQNVILRVWPSDGS
YPIGISRETSLQEKNRIKVFNEPLHLAKRIYFKIDHQKDESFLFALKSSL
EATEILTSGSEHSFTYYGKIIDLKIIAINELKQGEEDGSFICDQFESLRL
SSTPKQSKDKKLLYYSFAWNETELIFLNDASIYSQDRTPLEYLIGGLDSV
IHILKKAIASNDHRKKGILLFGPPGSGKTLIGERIGDTLGYRTISVAASD
IYSKFYGETESKLKDIFNQASSHEGKEGTILFIDDFDSLCPRRSDNTKTD
QEKRVLSGLIHMLDKHRESKNLVVLGATSRIDSVDPTLRRPNRFDYEVEI
SVPSPQEREQILNCVLKLKNVKVDRENVLTIANKTHGYVGADLESLVNES
LNISEEEKVKDPARLELRHFMSAFKKIRPSAMREVSIQVPDVSWEDIGGL
TDLKLKLKQAVEWPLKKPEVFARLGIKPPKGILMYGPPGCSKTMIAKALA
NESGLNFMAVKGPELFSKWVGESERAVRELFRKARAVAPSIIFFDEIDSL
CGSRGGSGDSKVSDRVLAQLLTEMDGVEVLNSVTIVAATNRPDMIDKALM
RPGRLDRVIYVPLPDVETRLRIFDIHSKRIPTQGLVDLKELAECTKGYSG
AEISAKMSLKASKSXPPLGGIIVAHVLKKPYTYDNSTTLDIGSGLILNNS
ASIARSVQGLLQDKKAPIHVKRWYDFIGSKKEVVETLKDVPSNSIPKATT
PKTKQDHQSTRQQKSSSKSSEKKEDVGKFVDLPGAEMGKVIVRFPPEASG
YLHVGHAKACLLNQHYRDHFQGKLILRFDDTNPAKEKEEFENVILEDLKL
LKVKYDYFSRTSDHFETMLNYCEKMIKEETAYVDDTDAETMKAERETRTX
SKNRSNTVEKNMNLWKEMKAGTDKGISCCVRAKINMLSDNGCMRDPTIYR
CKNEPHPSTGSKYKVYPTYDFACPIVDSIEGVTHALRTTEYMDRDEQFFW
FINALGLRQPHIYAYSRLSLTNTVMSKRKLTWFVESGQVEGWNDPRFPTV
RGVIRRGLTIEALKNFILAQGSSRSVVFMEWDKIWAFNRKIIDPIAPRYT
TVDESYHVLVNINGLKEEXVEFDKHPKNSDVGKKTLWRSSKVIIDGDDAE
ALKENEKATFINLGNVMIRKIHKANGKVSSIDGEPLLDDKDYKKTLKVTW
LANVSGAGFVPTQCVYFDHIISKSVLEKNDDFKNFVNRDSKFTVNMIGDH
EFKKLAVGDIIQVQRRGYFIVDKTYKEPSPHSCKGSPIVLIAIPDGTLGS
YGRPKSINAIVTTSKPEQKSPKKAVNHSGSSSSNNVSFASTSVTKKIGST
QSPVELDIKIREQGNKIRDLKAAKADKSAITQEVNLLLSLKAEFKSATGK
DWKPDAAPKVEAKSVSSAAXPNLGNKSDLSKQLNEDIIQQGNKVRNLKTE
KADKMAIDTAVKILLDLKAKYKSITGVDWKPSNPAPVPKPKKDSKKASSQ
LTSIETAQKQSRLGMEAKKEENLSDWYSQIIVKSEMLEYYDISGCYVLRP
WSFAIWENLTSFFDREIKKHEVQNCYFPMFVSKASLQKEEEHIDDFSPEV
AWVTKSGDTEMAEPIAIRPTSETVMYPTFAKWIQSHRDLPLKINQWCNVV
RWEFKHPQPFLRTREFLWQEGHTAHANMKDAKEEIRGKKTEKEKFAGGDF
XTTVEAYISAXGRAIQGATSHYLGQNFSKMFDVTFEDPETGNKQYVYQNS
WGFTTRTIGVLTMVHGDNQGLVLPPKISPVQVVIVPCGITANLKDEDRKS
LYKGCEIYEKSLVDKFGVRVKGDYRENISPGWKFNHWELKGVPIRLELGP
RDMKQNQFVVVRRDTGEKITCKSIEEVPTLLDTIQREMFAKAKKELDDHL
TIARTWNEFMDALNNKNLIHAPFCGDKECEEGIKDKSKGDAVVEPGSPSM
GAKSLCIPFNQVDQLKGSDKCLGCGGTPKYFTLFGRSY

mRNA from alignment at LSalAtl2s1136:171985..178909-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000806-696653 ID=EMLSAT00000000806-696653|Name=EMLSAT00000000806|organism=Lepeophtheirus salmonis|type=mRNA|length=6925bp|location=Sequence derived from alignment at LSalAtl2s1136:171985..178909- (Lepeophtheirus salmonis)
ATGCCTCCAAAAACGACTCCTAAACGGAAGTCCAAGGAGGAATGGGTACG
TGATGCGGAATCGGGGATCTTGCGTCATCCCTCCCTTGGCATCTTTGAAA
AAGAAGGGATTCTGAGTGTGCATGAATCTGAGTTTCAGTTGCTTGACTAC
TTGGACGCTAAAAGAATAAGAATTCCATTCGGAACACCGTTTCTATTACT
TTCTCCATCCCTCATGAAAGCTTTACTCTGGAAATTCGGATCTAGAGTTA
TACTCATTGATCAAAGTATTTAAAGAAAATGTTTTCTTCTTCTAACTCAA
TTTAAAGAATAATTATTGATTAATTTTCACCCTCACAGATGTTATCTTAA
GGGTCTGGCCTTCAGATGGATCTTACCCTATTGGAATATCTCGAGAAACG
TCCCTTCAAGAGAAAAACCGAATTAAAGTATTCAATGAACCTCTACATTT
AGCTAAACGAATATACTTTAAAATTGACCACCAAAAAGACGAAAGTTTCC
TGTTTGCCCTTAAATCTTCATTAGAAGCAACTGAGATTCTGACTTCAGGC
TCTGAACACTCTTTCACTTATTATGGAAAAATTATTGACTTAAAAATTAT
TGCCATTAATGAATTAAAGCAAGGAGAGGAGGATGGATCTTTCATTTGTG
ATCAATTTGAGTCTTTGCGCTTATCTTCCACTCCGAAGCAGTCTAAGGAT
AAAAAACTGCTTTATTATTCATTTGCGTGGAATGAAACCGAGTTGATATT
TTTAAATGATGCTTCAATTTACTCTCAGGATAGAACTCCATTGGAGTATC
TCATTGGTGGTCTAGATAGTGTAATACATATTCTCAAAAAAGCAATAGCT
TCTAATGATCACAGAAAAAAAGGAATTTTACTGTTTGGCCCTCCTGGATC
TGGAAAAACATTAATTGGAGAGAGAATAGGAGACACTTTGGGCTATCGTA
CAATATCAGTTGCTGCTTCAGATATTTATTCCAAATTCTACGGTGAGACT
GAGAGTAAATTAAAGGATATATTTAATCAAGCGAGCTCACATGAGGGCAA
AGAAGGAACAATATTATTCATTGATGACTTTGATAGTCTATGTCCTAGAA
GGAGTGATAATACAAAGACGGATCAAGAAAAAAGGGTATTATCTGGATTA
ATTCACATGCTGGATAAACATCGAGAAAGTAAGAACTTGGTTGTTTTAGG
TGCAACTTCTCGAATTGATAGTGTGGATCCTACTTTGCGCCGTCCGAATA
GATTTGATTATGAAGTAGAAATCAGTGTGCCATCTCCTCAAGAAAGAGAA
CAAATTTTAAATTGTGTTCTTAAGTTGAAAAATGTAAAAGTAGACAGAGA
GAACGTTCTAACAATCGCAAATAAGACACATGGTTATGTAGGAGCGGATC
TAGAATCTCTTGTTAATGAAAGCTTAAACATATCAGAAGAGGAGAAAGTA
AAAGATCCTGCTCGTTTAGAACTAAGACATTTTATGTCTGCTTTTAAGAA
GATTAGACCAAGCGCCATGCGTGAGGTATCGATTCAAGTCCCTGATGTGT
CGTGGGAAGATATTGGAGGATTAACTGACCTTAAGTTAAAACTCAAACAA
GCTGTTGAATGGCCGTTAAAAAAACCAGAGGTTTTTGCTCGCCTAGGAAT
CAAGCCACCTAAGGGAATTTTAATGTACGGTCCACCGGGATGTTCCAAAA
CAATGATAGCTAAAGCACTGGCCAATGAAAGTGGACTTAACTTCATGGCT
GTAAAAGGGCCAGAATTATTCAGTAAATGGGTTGGAGAGTCGGAAAGGGC
AGTAAGGGAATTATTTAGAAAAGCAAGAGCTGTTGCTCCTTCTATCATAT
TTTTTGACGAAATTGACTCTCTATGTGGTTCTCGTGGAGGAAGTGGCGAT
TCTAAAGTAAGTGACAGAGTTTTGGCTCAGTTGTTAACTGAGATGGATGG
TGTCGAAGTACTTAATTCTGTAACCATTGTAGCGGCAACAAATCGTCCTG
ATATGATCGATAAAGCTTTAATGCGTCCGGGAAGACTCGATCGTGTTATT
TATGTTCCATTGCCTGATGTAGAAACTCGCTTAAGGATTTTTGATATTCA
TTCTAAAAGAATTCCTACTCAAGGCTTAGTAGATTTGAAAGAACTTGCTG
AGTGTACAAAAGGATATTCTGGAGCTGAAATATCTGCTGTCTGTACAGAA
GCTGCACTTAGAGCCCTTGAAAGAGATATTAATTCAAAGATAGTGACAGA
ACAAGATTTCCATTCCGCTTTACGTATCATAACTCCTAGAATACATCCTG
ATTTGTTAAATATATATTCCGATTTTCAGGCGTCCCATCAGCGCAGTAAT
TTATGATTATTTATCATATATTTTTTTTCAGTGTTTTATAGAAAATGAGT
CTAAAAGCGTCGAAGAGTAANCCTCCGTTAGGTGGAATAATAGTTGCTCA
TGTTCTWAARAAGCCATATACATATGATAACTCAACTACGTTGGATATTG
GAAGTGGTCTTATCCTGAATAATTCGGCTTCTATCGCCAGGTCAGTACAA
GTAATTGCTGTTGAAGGTTATATTTCATTAACTTTATATTGCATAACATG
TAGGCAACTAGCTCGTGGCTCAGATCTTTATGAAGGAGATATTATTCAAA
AAACGGAAATTGATCATNTCATTGGTTAAGTTTTACTCTTGGACCTCTCA
ATGGAGAATTTCAAAATGCTATAGAGTATCTAGATCAGGTTTTGGAGCCT
GCTACTTATCTTGTTGGCAATAAAATAACAATTGCAGACTATACTGTTTA
TGGATTCTTGTTCATGTCTGGACTATGGAGGGKTTATTATTAAAAGTCAC
AAATAATGATTTATAAACTAATTATTATTTTTACAGGGACTCTTGCAAGA
TAAAAAGGCTCCAATTCATGTTAAACGATGGTATGATTTTATTGGTTCTA
AAAAAGAAGTTGTTGAAACTCTTAAAGATGTACCATCCAACTCTATTCCC
AAAGCGACAACCCCTAAAACTAAACAGGATCATCAAAGCACTCGTCAACA
AAAGAGTAGCTCTAAGAGTTCTGAAAAGAAGGAGGACGTGGGAAAATTTG
TTGATCTTCCCGGAGCAGAAATGGGAAAAGTTATTGTTCGCTTTCCTCCA
GAGGCATCTGGTTACCTTCATGTTGGCCATGCTAAGGCATGTCTTTTGAA
TCAACATTATCGCGATCACTTCCAAGGAAAACTGATTCTCCGCTTTGATG
ACACAAATCCTGCTAAGGAGAAAGAAGAATTCGAAAATGTGATTTTAGAA
GATCTCAAACTTTTAAAAGTCAAGTATGATTATTTTTCTCGTACTTCAGA
TCACTTTGAAACTATGTTAAACTACTGTGAAAAGATGATTAAAGAGGAAA
CGGCATATGTTGATGATACAGATGCTGAAACTATGAAAGCTGAAAGAGAA
ACTCGTACGGWGTCTAAGAACCGTAGCAATACAGTTGAAAAAAATATGAA
TCTTTGGAAGGAAATGAAGGCAGGCACGGATAAAGGAATCTCTTGTTGTG
TGCGTGCTAAGATCAATATGTTGTCTGATAATGGATGCATGCGGGATCCT
ACCATTTATCGTTGTAAAAACGAGCCCCATCCTTCTACTGGATCTAAATA
TAAGGTCTATCCTACCTATGATTTTGCGTGCCCTATTGTAGATTCCATTG
AAGGAGTTACTCATGCTCTTAGAACTACAGAGTATATGGACAGAGATGAA
CAGTTCTTTTGGTTTATCAACGCCTTAGGACTACGTCAGCCTCATATTTA
TGCTTATTCTCGGCTTAGCCTCACAAATACTGTTATGTCTAAGAGGAAAT
TAACGTGGTTTGTTGAGTCTGGGCAAGTTGAAGGATGGAATGATCCACGT
TTCCCTACTGTACGTGGCGTGATACGAAGAGGCCTCACTATTGAGGCTTT
AAAAAACTTTATTTTGGCTCAGGGATCCTCCAGATCTGTCGTTTTTATGG
AGTGGGATAAAATATGGGCTTTCAATAGAAAAATTATTGATCCTATTGCA
CCGAGATACACAACTGTTGATGAATCATATCACGTTCTTGTAAACATCAA
TGGCTTGAAAGAAGAGKCTGTGGAGTTTGATAAACATCCTAAGAATTCAG
ATGTTGGTAAAAAAACGTTGTGGCGTTCATCGAAGGTAATCATTGATGGA
GATGATGCCGAGGCTCTAAAGGAAAATGAGAAGGCTACGTTCATTAATTT
GGGTAATGTAATGATTCGTAAAATACATAAAGCTAATGGTAAAGTTAGCT
CAATCGATGGTGAACCTCTTCTTGACGATAAAGATTATAAGAAAACCCTG
AAGGTTACTTGGCTTGCTAATGTCAGTGGAGCTGGATTTGTTCCTACCCA
ATGTGTCTATTTCGACCATATCATTTCGAAATCAGTTCTAGAAAAAAATG
ACGATTTCAAAAACTTTGTTAATCGAGACTCCAAGTTTACTGTTAACATG
ATCGGTGATCATGAATTTAAGAAACTTGCTGTTGGAGATATTATTCAAGT
TCAAAGACGTGGATACTTTATTGTTGATAAGACATACAAGGAACCAAGTC
CTCATAGCTGTAAGGGATCTCCAATTGTACTTATAGCAATCCCTGATGGT
ACTCTTGGAAGTTATGGACGTCCCAAGTCTATTAATGCAATTGTTACTAC
ATCCAAGCCTGAACAAAAGTCACCTAAGAAAGCAGTAAATCATTCTGGAT
CATCATCATCTAATAATGTATCATTTGCTTCAACATCTGTAACTAAAAAA
ATTGGTTCAACTCAAAGCCCTGTTGAACTTGATATAAAAATTCGTGAACA
AGGAAATAAAATAAGGGACTTGAAGGCTGCTAAGGCTGATAAGTCTGCGA
TCACACAAGAAGTTAACTTACTGCTATCTCTTAAAGCTGAATTTAAATCT
GCTACTGGTAAAGATTGGAAACCTGATGCGGCRCCTAAGGTTGAAGCTAA
AAGTGTTTCTTCAGCGGCTTYTCCAAATTTAGGGAACAAATCAGACCTAA
GTAAACAGTTAAATGAAGATATCATTCAACAAGGGAATAAGGTGAGAAAT
TTAAAAACCGAAAAAGCTGATAAAATGGCAATAGACACTGCTGTTAAAAT
TCTTTTGGATTTAAAGGCGAAATATAAGTCCATTACTGGAGTTGACTGGA
AACCTTCCAATCCTGCACCTGTTCCCAAACCTAAAAAGGATAGTAAAAAA
GCTTCAAGTCAATTGACTTCAATTGAAACCGCTCAAAAACAAAGCCGTCT
TGGCATGGAGGCTAAAAAAGAGGAAAACTTGTCAGATTGGTACTCCCAGA
TCATAGTAAAATCTGAAATGCTGGAGTACTATGACATATCTGGATGCTAT
GTACTCAGACCATGGTCATTTGCAATTTGGGAGAACTTGACTTCCTTTTT
CGACCGTGAGATAAAGAAGCACGAAGTTCAAAATTGTTACTTTCCTATGT
TTGTATCCAAGGCATCTCTACAAAAAGAGGAAGAACACATCGATGACTTT
TCTCCAGAAGTCGCTTGGGTTACAAAGTCTGGAGATACAGAAATGGCAGA
ACCTATTGCTATCCGACCAACAAGTGAAACTGTAATGTATCCTACTTTTG
CAAAGTGGATTCAGTCTCATCGAGATCTTCCTCTTAAAATAAATCAGTGG
TGTAACGTTGTTGTAAGTGCATGTTACTTTTAAACTGGCTTAGCCATGAC
TATAAAAATTATAATAATTTGAATTTTTTTTAGCGATGGGAGTTCAAACA
TCCACAACCATTTTTGAGAACACGAGAATTTCTTTGGCAAGAAGGTCATA
CGGCTCACGCCAACATGAAAGATGCCAAGGAAGAAGTTTTAACAATGTTG
GACCTCTATAGACAAATTTATGAGGATTTAATGGCTGKGCCAGTGGKAAG
KATTAATTTTACAACCCATTAATATGCTCTTGATGATATATCATTTCCAT
TAATGAATAGATCCGTGGTAAGAAAACCGAGAAAGAAAAATTTGCAGGAG
GAGATTTTMCCACAACGGTTGAGGCCTATATCTCTGCAKCRGGGCGAGCC
ATTCAAGGTGCCACATCTCATTACTTGGGGCAAAACTTTAGCAAAATGTT
TGATGTTACATTTGAAGATCCTGAAACGGGGAATAAACAGTATGTATACC
AAAACTCATGGGGATTTACGACTAGAACCATCGGTGTTCTCACAATGGTA
CATGGAGACAATCAAGGTCTTGTTCTTCCTCCCAAAATATCTCCAGTTCA
AGTTGTCATTGTTCCTTGTGGAATCACAGCAAATCTGAAGGATGAGGATA
GAAAATCCCTTTATAAAGGTTGCGAAATATACGAAAAAAGTCTTGTTGAT
AAGTTTGGAGTGAGAGTCAAGGGAGATTATAGGGAAAATATATCTCCAGG
ATGGAAATTCAATCACTGGGAACTTAAAGGAGTTCCTATTCGACTTGAAT
TAGGTCCAAGAGATATGAAACAAAATCAATTTGTGGTTGTACGTCGAGAT
ACAGGAGAGAAGATCACTTGCAAAAGCATTGAAGAAGTTCCTACTCTCCT
TGATACTATCCAAAGAGAGATGTTTGCCAAAGCTAAGAAAGAATTGGATG
ATCACCTTACTATTGCCCGAACTTGGAACGAGTTCATGGATGCTCTCAAC
AACAAGAATCTAATCCATGCTCCATTTTGCGGAGACAAAGAGTGCGAGGA
AGGCATTAAAGACAAGAGCAAAGGAGATGCCGTTGTTGAGCCTGGAAGTC
CCTCTATGGGAGCAAAGTCACTCTGCATACCTTTTAACCAAGTAGATCAA
CTCAAAGGCAGTGATAAATGTCTAGGATGTGGAGGTACTCCCAAATATTT
CACTCTCTTCGGAAGAAGTTACTAG

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