EMLSAT00000000814, EMLSAT00000000814-696661 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000814
Unique NameEMLSAT00000000814-696661
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1136supercontigLSalAtl2s1136:201446..204289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000814 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000814EMLSAG00000000814-683580Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003547EMLSAE00000003547-712475Lepeophtheirus salmonisexon
EMLSAE00000003548EMLSAE00000003548-712476Lepeophtheirus salmonisexon
EMLSAE00000003549EMLSAE00000003549-712477Lepeophtheirus salmonisexon
EMLSAE00000003550EMLSAE00000003550-712478Lepeophtheirus salmonisexon
EMLSAE00000003551EMLSAE00000003551-712479Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774412auto774412Lepeophtheirus salmonispolypeptide
EMLSAP00000000814EMLSAP00000000814Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000814

>EMLSAP00000000814 ID=EMLSAP00000000814|Name=EMLSAP00000000814|organism=Lepeophtheirus salmonis|type=polypeptide|length=258bp
MSNRKALALTAGTVAGLGGALLGYYLWHTLWADREEEDGWNFPSYLSIKI
LKEDSGVVIGRGGANIQEIEFKTSTKMHFKDELETESHRVLTIRGSQENI
ELAEILIRQTILNQPTILVSTMKIPGKTAGVVIGKKGNNINNIRNLSRCK
INIDRNEDSSGLKLVELKGTAEQITIGKRLIQEYIDDATDLRKKIRNTSL
TRPSRDKTLFLTSDQNDNESPIVRDSYLEEFQPLNTQDAIEVYVSYTESP
DFYYVQKV
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mRNA from alignment at LSalAtl2s1136:201446..204289+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000814-696661 ID=EMLSAT00000000814-696661|Name=EMLSAT00000000814|organism=Lepeophtheirus salmonis|type=mRNA|length=2844bp|location=Sequence derived from alignment at LSalAtl2s1136:201446..204289+ (Lepeophtheirus salmonis)
CAAAAATTGAAGTTACCTACATAATAAATATATTTTATCATCTGGTTGAC
AAATAAAAACTAAAGTAAATAAAAATTAAAGTGGGAACTTTTATTTATTT
GAGATTTCTGATTTTTCTTAAGATAATCCTTTTCATTTCCATTGATCGGT
GGTCTAAGCTCTCTCTGATTACATGACGACCATGCAATGAAAAATAATTT
AAACTGATGAAATATGAGGATTAAGTATTACTATATTTACTAATAAAGAA
ACCGTGTGGAGAGTTAGCATAACATTGGATTGAGTTAATAGTTATAGAAT
TAATTATTATGAGTAACAGAAAGGCTCTTGCTCTAACAGCTGGAACTGTA
GCAGGGCTTGGAGGGGCACTTCTGGGATATTATCTCTGGCATACCCTTTG
GGCGGATAGAGAGGAAGAAGATGGATGGAATTTCCCTTCATATTTGAGCA
TCAAAATCCTTAAAGAAGACTCTGGGGTTGTTATTGGTAGAGGTGGCGCC
AATATCCAAGAAATTGAGTTTAAAACCTCAACTAAAATGCATTTCAAAGA
TGAACGTGAGATTATTTGATCTAATTTACTTAACTTTACGATTTAATTAG
ACTTTTAATTCTATTCCGCCATGAAATAGTGGAAACAGAATCCCATCGTG
TTCTTACCATTCGAGGTTCTCAAGAAAACATTGAATTGGCTGAGATCCTC
ATTCGACAAACCATTCTTAATCAACCCACAATTCTGGTATCTACCATGAA
AATCCCAGGGAAAACGGCTGGMGTTGTAATTGGAAAAAAAGGAAATAATA
TAAATAATATTCGGAATCTCTCAAGGTGTAAAATCAACATTGATAGAAAT
GAGGATTCTTCAGGTCTTAAATTGGTGGAGTTGAAAGGCACGGCTGAGCA
AATCACTATAGGAAAGCGTCTTATTCAAGAATATATTGATGATGCTACGG
ATCTACGCAAAAAGATTAGGAATACTTCCCTTACAAGACCCTCGAGAGAC
AAAACCCTATTTCTTACTTCTGATCAAAACGATAATGAATCTCCAATTGT
CAGAGACTCTTATCTTGAGGAGTTTCAACCCTTAAATACTCAAGATGCCA
TTGAAGTCTACGTTTCATACACAGAGAGTCCTGATTTCTATTATGTTCAA
AAAGTNTGATGCTGGATAAACTTGTGCAGGATATGACCACTTTCTATAAT
GAAAAATTCAATAGAGAGGATAATTCCGTTGAGAAGGTATATACTGTATA
CATTAACGCAGAGTTTTCTCTCAAAATGTTAGTTTTTTTTTAGGTTGAGG
TGGACGATATCGTTGCCTGCAAATTTAGTCTTGATGGACACTGGTATAGG
AGCCGAGTTGTCAAAATCATTGAAGATGAATATGATCTCGAAAATACATT
CTATGAAGTTGAGTTTGTTGACTTTGGAGATCTCGAGTCAAAACTTAAAA
CTGAAATCTACAATTTGAAAACGGAGTTTCTTAAACTAAACTTCCAAGCC
ATTGCCTGCAAGTTGTCGAATGTGAAGCCTCTGTAAGTATATGAGAGAAA
ATGATATGTACATATTATAATTCCAAAGATTACAGGAGTGAAGCAGAGGG
ATGGAGTGAGGAATGCTGCTACGAATTCTCAAAGTTGACTCATAGTGCAA
AATGGGAAGTCCTTCTTGCCAAAATTGTGGAATATGGGAATTGTAAGGAA
GGGATTAAGCCTTCCCTCATGTTATTCGAAACCAAAGGATCGGATAATAC
TGACATTGGCAAAGAATTGGTTCGACTCAACCTGGCTAAGCCTAATTAAG
TTGATGATACGTGTTTGTTCCAGCTTTGCTCAATAATAAGGTGCATAACT
GAATTTTAGTTGTCTCGTTTACCTGACATAACATAATCTTTCGCTCCTAG
ATGAACCTGTAGACTTAAATTAAATTTTGAAGATTGTAGTTTTTTTTTCA
TTTGACTAGTTATTTGTATATTTAATCAAATTATATACATCAAGTAATTA
AAAATATATATGACGATCATGACTCACGTCCAACAATAAATTCTATATCT
ATGACGTTAGGTATTGTTCCTCTAATAACATCACCATTTCTTACGGGACC
CACTCCTTCAGGTGTTCCGGTAAGGATTAAGTCTCCCTCCTCAAGTGTGA
AATAGTCTGATATGTAAGATATTAGGTTCGATACACTGAATATCATGTCT
TCAGTATTTCCATCTTGTCTCATTTCATCATTCACGAAGCATTGAAGCTG
AACATGACCTGGATCAGGGATTTTATCTATACTAATAAACTCACTGACGG
GACAGGATGTATCAAACCCTTTTGCCATTGCCCAAGGATAGCCTTTGGCC
ATAGCAGTCCGCTGAAAGTCCCTACAGGTCATATCAAGGGCAAGTACGTA
GCCTCCTATATATGATGCAGCCTCAGTATCAGACACTCTTGAGCACTTTT
CCTTAATAATGACTCCCAACTCAATTTCGTGATGAATTTCTGAACATCCT
AATGGGATCTATGAGATCATACATGAAAATATTAAAGTATATAGTTTAAT
AATGTTGAAGGTGATAGTACCTCAATGCGCTCTCCTGACTGGATATACGA
TGATGTAGGCTTTAAGAATAACATAGGAGATGAAGGAACTTCATTTTTAA
GCTCTATAGCGTGAGCTCTTAATTCATGAAAAAAACAAATAATTAATTAA
GATAATTGAAAGAATTCATAGTTTTTTAAAAGATTACTTGTAATTCCGTC
CAACACCCACGATTTTTCGACCAATTTTCGTGAACCTCGAAAGATTAGAC
ATTATTTCTACACTCCTTAAAATCAGTGAGATATTATATTAGTT
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