EMLSAT00000000815, EMLSAT00000000815-696662 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000815
Unique NameEMLSAT00000000815-696662
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1136supercontigLSalAtl2s1136:203462..204259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000815 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000815EMLSAG00000000815-683581Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003552EMLSAE00000003552-712480Lepeophtheirus salmonisexon
EMLSAE00000003553EMLSAE00000003553-712481Lepeophtheirus salmonisexon
EMLSAE00000003554EMLSAE00000003554-712482Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774449auto774449Lepeophtheirus salmonispolypeptide
EMLSAP00000000815EMLSAP00000000815Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000815

>EMLSAP00000000815 ID=EMLSAP00000000815|Name=EMLSAP00000000815|organism=Lepeophtheirus salmonis|type=polypeptide|length=217bp
MSNLSRFTKIGRKIVGVGRNYKAHAIELKNEVPSSPMLFLKPTSSYIQSG
ERIEIPLGCSEIHHEIELGVIIKEKCSRVSDTEAASYIGGYVLALDMTCR
DFQRTAMAKGYPWAMAKGFDTSCPVSEFISIDKIPDPGHVQLQCFVNDEM
RQDGNTEDMIFSVSNLISYISDYFTLEEGDLILTGTPEGVGPVRNGDVIR
GTIPNVIDIEFIVGRES
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mRNA from alignment at LSalAtl2s1136:203462..204259-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000815-696662 ID=EMLSAT00000000815-696662|Name=EMLSAT00000000815|organism=Lepeophtheirus salmonis|type=mRNA|length=798bp|location=Sequence derived from alignment at LSalAtl2s1136:203462..204259- (Lepeophtheirus salmonis)
AGTGTAGAAATAATGTCTAATCTTTCGAGGTTCACGAAAATTGGTCGAAA
AATCGTGGGTGTTGGACGGAATTACAAGTAATCTTTTAAAAAACTATGAA
TTCTTTCAATTATCTTAATTAATTATTTGTTTTTTTCATGAATTAAGAGC
TCACGCTATAGAGCTTAAAAATGAAGTTCCTTCATCTCCTATGTTATTCT
TAAAGCCTACATCATCGTATATCCAGTCAGGAGAGCGCATTGAGGTACTA
TCACCTTCAACATTATTAAACTATATACTTTAATATTTTCATGTATGATC
TCATAGATCCCATTAGGATGTTCAGAAATTCATCACGAAATTGAGTTGGG
AGTCATTATTAAGGAAAAGTGCTCAAGAGTGTCTGATACTGAGGCTGCAT
CATATATAGGAGGCTACGTACTTGCCCTTGATATGACCTGTAGGGACTTT
CAGCGGACTGCTATGGCCAAAGGCTATCCTTGGGCAATGGCAAAAGGGTT
TGATACATCCTGTCCCGTCAGTGAGTTTATTAGTATAGATAAAATCCCTG
ATCCAGGTCATGTTCAGCTTCAATGCTTCGTGAATGATGAAATGAGACAA
GATGGAAATACTGAAGACATGATATTCAGTGTATCGAACCTAATATCTTA
CATATCAGACTATTTCACACTTGAGGAGGGAGACTTAATCCTTACCGGAA
CACCTGAAGGAGTGGGTCCCGTAAGAAATGGTGATGTTATTAGAGGAACA
ATACCTAACGTCATAGATATAGAATTTATTGTTGGACGTGAGTCATGA
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