EMLSAT00000000820, EMLSAT00000000820-696667 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000820
Unique Name	EMLSAT00000000820-696667
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1136	supercontig	LSalAtl2s1136:85863..92511 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000820 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000820	EMLSAG00000000820-683586	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003573	EMLSAE00000003573-712501	Lepeophtheirus salmonis	exon
EMLSAE00000003574	EMLSAE00000003574-712502	Lepeophtheirus salmonis	exon
EMLSAE00000003575	EMLSAE00000003575-712503	Lepeophtheirus salmonis	exon
EMLSAE00000003576	EMLSAE00000003576-712504	Lepeophtheirus salmonis	exon
EMLSAE00000003577	EMLSAE00000003577-712505	Lepeophtheirus salmonis	exon
EMLSAE00000003578	EMLSAE00000003578-712506	Lepeophtheirus salmonis	exon
EMLSAE00000003579	EMLSAE00000003579-712507	Lepeophtheirus salmonis	exon
EMLSAE00000003580	EMLSAE00000003580-712508	Lepeophtheirus salmonis	exon
EMLSAE00000003581	EMLSAE00000003581-712509	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771814	auto771814	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000820	EMLSAP00000000820	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1136:85863..92511-

protein sequence of EMLSAP00000000820

>EMLSAP00000000820 ID=EMLSAP00000000820|Name=EMLSAP00000000820|organism=Lepeophtheirus salmonis|type=polypeptide|length=2027bp
MEGGYILDAEXLKDVSDAKRGPGLYSWLRQLXKAQETVGRSWSKEXQETL
RXQLLEVILGSGSPPIRTLASKVMVRLFCGGETIRLFETINALNDVLSKN
KDDLPTRRLGAISCLGIMYADLGRLTGRSYEETSSLLVKGLKSGECITRV
ETMNALGKISGSLGSAAVPVHRDIYKSCRLALTDRAMSVKTGSALCLLSL
SEHATFLHTSELENIATLCFRAMDGANYEARKAIAKLLEEAFTILGNGFI
KGGSSSGLIKGGSPVSQDVRVGISHSYVVTVTTLGGLWLEKNHNIFLTHI
LELVSHPKASSTHVDAVYSRRCAGFIIRTLLGKLLGEKSQLKACEDLINM
VARMVKSLDIGNSNGGSGGGSKDSNSNSISASSPVLDSSHSQHALYVALT
ELGFLLIRLGTSARSLVQTDSILTXVLLSVLIHPSQAPRLAAAWCLRCLC
IAVXXXXXXXXKCLEGLDSLKTSPEAIAGYSSALAALLGAVRHTPLGIPH
TRGKVLFNVGEELLRTASQNSRLSRERTQAGWHLIGAIMTLGSSVVKGLL
PRMMLLWRNAFPRSLKELESEKARGDAFTWKISLEASAGXLATIHSFLQN
CPELLNEDIRRRICVPVESALTLLGNVGNVLKSYQSELKALSAMLRLRLF
ETLSLLPPSCLESSFTPLLRLLVAEFTLTDGQSNAFTSLLPSLCHSENSI
LLGTRFQDTEDVSIEDQLLFPNSASGSVALEHDICSLYRKRKDESLEPAF
SLPLGVAVVDIAIVVYGVVFPRVAQKHRVQMLNHFMEQLKQTTKTNARTE
AIHLNIFSAILSGLKGMVDAKVGFGNQEDVKSALSKLILGSLTSQNPLMR
CVSAEALGRMAQVVSDSKFVAEMAQNSFDCLKSARDVVSRTGHSLALGCL
HHYVGGMGSSQHLHTSVSILLALAQDSASPQVQVWSLHALALIADSGGPM
FRSFVEPTLSTILKLLIIVQSSQLEVMVCLGRVLSALITTVGPELQGTST
SITTARSSFLVACXXLQNXGHSIVEAXAISSLQQLHMFAPSHVDLATLVP
NLCRLLCSNHFVLRASAVSCLRQFAQREAKEVCEHALTLLNDQKGGDTSE
FVQFKESGLPGVFFSLLDLEVNGNMISNIHDTLNSVMQSMAXENLTMWLS
LLREVLTVSTDSDSPALDEDKDEDADDAEFNAGDDSNKEIVHPRWPTRVF
AAMCLRKIISECCQGDRAHYDLGLAKEMQLSQFNGGNDYLVLHLSELVXV
AFMAATSESDPLRLEGLKTLEVVIEKFGDTQEPEFPGHVILEQYQAQVGA
ALRPAFSSDTASHVTSSACDVCSCWIGSGVARDLNDLRRVYQLLVGSLEK
LRKGSGSQIYNESALTLEKLSILKAWAEVYIVSMKDDNKGVGNDDDFEEF
DSLGSNSSMGSLATLVQSELSSLSKHWIAALRDYALLSLPPEFKSQLPYD
GGAFYTNDTIESARPHYRSTWPQMLQASAIWLTVGNGFCAHLSANSQEET
DETKDEENNMEDDNNNRFHLIFGVCIEALSNSRCSDLTQVQVTSCLIGLK
TLLDDPWCRSNPFLNSPELAVELCNVLHRTILTRDRPSIQILVMDVLISL
LEMRKFLISNESSNGETEEKRKILPEGGTDGKIEPGQSVVFASLEVCLCI
LIRHYPDLSTRATNLNSFTAIQAKSFSIVIKQQQQTQPELITRAISALSL
IPDLCSPSGALTVLPSVLYLLTGVLIKESKALVEDAFRESDEQSPPISAS
ITAIKNVLALNLELQEEEEKRWEELLSSSFAQIIKEYDSLDEHTLILCLT
LLIIRAPTSVTLSLKTHTLDPFKKCLRDDQESRVKLRCIQALQSVFQHPQ
KRISHFYIVSLSPRLFQISFMLHSNLKSETDLRFLLECHNLIESLIVKGG
SPNAILQFLIPALVNQLLSGDALFKCTNKFVLGLHDKALNKLTLIGQKYP
SEFKDTLGGQKALKNKLETALKDNQLRFSQKSQNIPSTPSSPIKNISGDH
QVCNDSNKQSSTPSIKLSTDFSNFVVK

mRNA from alignment at LSalAtl2s1136:85863..92511-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000820-696667 ID=EMLSAT00000000820-696667|Name=EMLSAT00000000820|organism=Lepeophtheirus salmonis|type=mRNA|length=6649bp|location=Sequence derived from alignment at LSalAtl2s1136:85863..92511- (Lepeophtheirus salmonis)
ATGGAGGGCGGATATATCCTTGATGCAGAGMTGCTCAAGGATGTTTCTGA
TGCTAAACGAGGTCCTGGATTATATTCCTGGCTTCGGCAGCTGGYTAAAG
CTCAAGAGACTGTTGGGAGATCCTGGAGTAAAGAGGMGCAAGAGACTCTA
CGCAGMCAATTATTGGAAGTGATTCTTGGATCCGGGAGTCCCCCCATCCG
AACTCTGGCATCCAAAGTGATGGTCCGACTCTTTTGTGGAGGAGAAACGA
TTCGGCTCTTTGAGACCATCAATGCCTTAAACGACGTTCTCTCTAAAAAC
AAGGACGATCTTCCGACTCGGCGTTTGGGTGCCATTTCCTGCCTTGGGAT
CATGTACGCGGATCTTGGAAGGTTAACTGGGCGATCCTACGAGGAAACTT
CGAGCTTGCTAGTCAAGGGTCTGAAGTCAGGAGAATGCATCACGCGAGTG
GAGACTATGAATGCCCTAGGAAAAATATCTGGCTCTCTTGGCTCGGCTGC
TGTTCCCGTACATCGAGATATTTACAAGTCATGTCGTTTGGCTCTCACGG
ATCGTGCAATGAGTGTGAAGACGGGCTCTGCTCTCTGTCTACTCTCTCTT
AGTGAACATGCCACATTCTTGCATACGTCAGAACTAGAAAATATAGCTAC
CCTTTGTTTCCGTGCCATGGATGGAGCCAACTATGAGGCGAGGAAGGCCA
TTGCAAAGCTATTAGGTACTTTAATTGCTAAAACATTGATAGAGAGCCCC
ACGGNAAGAAAGTTATCTCCAAGAAAAGTTCACACATTCCTGGAGAAGCC
TCAACTCTTCTCACCATAGAAGAAGCTTTCACCATTCTTGGTAATGGATT
TATTAAAGGAGGATCTTCCTCCGGACTAATAAAAGGAGGTTCTCCCGTTT
CACAAGATGTCCGTGTGGGAATTTCTCATAGTTATGTTGTCACGGTCACA
ACGCTTGGTGGCCTTTGGCTTGAAAAGAACCACAATATATTTTTGACTCA
CATACTGGAGCTTGTCTCTCACCCCAAAGCCTCTAGTACACATGTAGACG
CTGTTTACTCTCGGCGATGTGCTGGTTTTATTATTCGCACTCTTTTGGGC
AAACTATTAGGTGAAAAATCTCAACTTAAGGCTTGTGAAGATCTCATTAA
CATGGTGGCACGTATGGTAAAATCTCTTGATATTGGGAATTCTAATGGCG
GRAGTGGTGGTGGTAGCAAGGACTCGAACAGTAATTCAATATCGGCTTCA
AGCCCTGTCTTGGATTCCTCTCATTCTCAACATGCCTTGTATGTAGCTTT
AACGGAGTTGGGATTTCTTTTAATTCGGCTTGGAACAAGTGCTCGTAGCT
TAGTTCAAACAGACTCCATTTTAACTTYAGTCTTACTGAGTGTTTTAATT
CATCCGTCTCAGGCTCCGAGATTAGCAGCTGCATGGTGCTTACGATGTTT
GTGCATCGCCGTCNNNNNNNNNNNNNNNNNNNNNNNNAAGTGTTTAGAAG
GACTTGATTCTCTTAAGACATCTCCTGAAGCTATAGCAGGATATAGCAGC
GCTCTTGCTGCATTATTAGGAGCTGTTCGGCATACCCCTTTGGGTATACC
TCACACTAGAGGTAAAGTGTTGTTCAATGTAGGTGAAGAACTTCTCCGAA
CAGCGAGTCAGAACTCTCGACTATCTCGTGAAAGAACACAAGCTGGTTGG
CATTTAATTGGTGCCATCATGACTTTAGGGTCTTCCGTTGTTAAGGGCTT
GCTACCTAGAATGATGTTACTGTGGAGAAATGCATTTCCTAGGTCTCTTA
AGGAATTAGAGTCGGAAAAAGCAAGAGGAGATGCATTTACTTGGAAAATT
AGTCTTGAAGCTAGYGCYGGTGRTTTAGCCACTATTCATAGCTTTTTACA
GGTATTTTTTACTCTTCAGACTCAAGTGCATTTTATAAAAATTATTTTAN
NNNTTTCAATATTTCAGAATTGTCCAGAACTTTTGAATGAGGATATTCGG
CGACGAATCTGTGTACCTGTTGAGAGTGCATTAACTTTATTGGGCAATGT
TGGAAATGTGTTGAAGTCCTATCAGTCTGAGCTCAAGGCATTGAGTGCAA
TGCTTCGTCTACGGTTATTCGAGACTCTTTCTCTTCTTCCACCGAGTTGT
TTGGAAAGCTCGTTTACCCCCTTACTACGATTACTCGTAAAATCATTCTT
AGTCTTTGTTTAACTTTCAATCACTCAATTTGCTATTCTCTGCTAATTAG
GTTGCTGAATTCACTCTAACAGATGGACAGTCAAACGCATTCACTTCACT
TCTTCCATCATTATGCCATTCTGAGAACTCCATACTCTTAGGAACGCGAT
TTCAAGACACGGAAGATGTCTCAATTGAGGATCAGTTACTATTTCCTAAT
AGTGCTTCTGGCTCTGTAGCATTGGAACATGATATTTGCTCATTATATAG
GAAAAGAAAAGATGAGTCCCTAGAACCTGCCTTTTCATTACCCTTAGGTG
TCGCTGTCGTTGATATAGCCATTGTTGTGTATGGTGTCGTTTTCCCAAGG
GTTGCTCAAAAGCATCGTGTGCAAATGCTCAATCACTTCATGGAGCAGTT
AAAGCAAACAACGAAAACAAACGCTAGAACAGAAGCAATACATCTTAATA
TTTTTAGTGCTATTCTGTCAGGGCTGAAAGGCATGGTAGATGCAAAAGTC
GGATTTGGGAATCAAGAGGATGTTAAAAGTGCTTTAAGCAAACTAATACT
TGGTATACATAAAATAGTTATAGATAAAAGTATTTTTAGTAAGGAATACT
TTTTGTTCCTTCCTTATAGGTTCATTGACCTCCCAAAACCCTTTAATGCG
GTGTGTGTCTGCCGAAGCCTTAGGCCGTATGGCTCAAGTTGTTTCAGATT
CTAAATTTGTAGCAGAAATGGCTCAAAATTCATTCGATTGTTTGAAATCT
GCAAGGGATGTTGTCTCAAGGACGGGACATTCTCTTGCATTAGGATGTTT
ACATCATTATGTTGGGGGTATGGGCTCATCTCAGCATCTTCACACATCTG
TTTCTATCCTACTGGCTCTGGCTCAAGATTCTGCAAGTCCTCAAGTTCAA
GTTTGGTCCTTACACGCTTTGGTATTTCTTTTTTTAAATATATAAATCCA
AAGTGCGAGAGGAATATAGTATAATTTATTTTTTGTAGGCATTAATAGCG
GATTCAGGCGGTCCAATGTTTAGAAGCTTTGTGGAACCTACTCTCTCTAC
TATTTTAAAACTGTTAATCATAGTCCAATCCTCGCAACTTGAAGTTATGG
TATGTCTGGGAAGGGTTTTATCCGCGTTAATAACGACTGTTGGACCAGAA
CTTCAAGGAACAAGTACATCCATAACTACTGCTCGGTCTTCATTCCTTGT
AGCTTGTKCCATKCTCCAAAATCAMGGACATTCGATAGTTGAAGCTYAAG
CCATTAGCTCTCTTCAGCAACTTCATATGTTCGCTCCATCACATGTAGAT
CTGGCTACTCTTGTACCTAATCTCTGTAGACTTTTGTGCTCAAATCATTT
TGTTCTCAGAGCTTCTGCTGTCTCATGTCTCAGGCAGTTTGCTCAAAGGG
AAGCAAAAGAAGTTTGTGAACATGCATTAACTTTACTTAATGATCAAAAA
GGTGGAGATACATCTGAGTTTGTTCAATTCAAAGAGTCTGGTCTCCCTGG
TGTATTTTTCTCTCTTTTGGATCTTGAAGTAAATGGCAATATGATTTCTA
ATATTCATGATACATTGAATTCTGTTATGCAATCAATGGCTGSTGAGAAT
TTAACTATGTGGCTCTCTCTACTTCGAGAAGTTCTGACAGTTAGCACAGA
CTCTGATTCTCCAGGTATTTTCTACAATTTGAAAATAGTATATGAAGTGT
CATAGGACTAATATATTTAATTAATTTTAAGCTTTGGACGAAGATAAAGA
TGAGGATGCAGATGACGCGGAGTTTAATGCTGGGGATGATAGCAATAAAG
AAATTGTTCACCCCAGATGGCCAACCCGCGTTTTTGCAGCTATGTGTCTC
AGAAAAATTATATCAGGTAATAGTATAGCTGTGATATGAATAAATATATT
TTGAATATTCTTTCTCTCAATTAGAATGTTGTCAGGGAGATAGAGCTCAT
TATGATCTCGGATTGGCTAAGGAAATGCAATTAAGTCAATTCAATGGAGG
AAATGACTATCTTGTGCTTCATCTATCAGAATTAGTTNGTGTTGCTTTCA
TGGCCGCCACAAGTGAGTCTGATCCCTTGAGACTTGAAGGACTTAAAACA
TTAGAAGTAAGTATCACTTTGATTTGAATACATTCAATACACAATAACAC
ATAAATGAATTAATTTTCTTTCACTCAGGTTGTCATCGAAAAATTTGGGG
ATACTCAAGAGCCCGAATTTCCGGGTCATGTCATTCTTGAGCAATATCAG
GCACAAGTTGGAGCAGCTCTACGCCCAGCCTTTTCTTCTGATACAGCTAG
TCATGTGACCTCTTCTGCATGTGACGTATGTTCGTGTTGGATTGGATCTG
GGGTCGCTAGAGATTTGAATGATTTGAGACGTGTATATCAACTTCTTGTG
GGATCTTTGGAAAAACTGAGGAAGGGATCTGGCTCTCAAATTTATAATGA
AAGTGCTCTTACCCTGGAGAAGCTTTCAATACTTAAGGCTTGGGCGGAAG
TATATATTGTATCCATGAAAGATGACAACAAAGGAGTTGGGAATGACGAC
GATTTTGAGGAATTTGACTCTCTTGGTTCAAATTCTTCCATGGGATCCCT
TGCGACTCTGGTTCAGTCAGAGCTTTCTTCTTTATCGAAACACTGGATTG
CTGCTTTGAGAGATTATGCTCTTCTATCCTTGCCTCCAGAATTTAAGTCT
CAATTACCTTATGACGGAGGAGCTTTTTATACAAATGATACAATCGAATC
TGCTCGACCTCATTATCGTTCTACTTGGCCACAAATGCTCCAAGCTTCTG
CTATTTGGCTGACTGTTGGAAATGGTTTTTGTGCTCATCTCTCTGCTAAT
TCTCAAGAGGAAACTGACGAAACAAAAGATGAAGAAAATAACATGGAAGA
TGATAATAATAACAGATTTCATCTTATTTTTGGAGTTTGTATTGAGGCTT
TGAGTAATAGTCGATGCAGTGATCTTACTCAAGTACAGGTTACAAGTTGT
CTTATAGGATTAAAAACACTTTTGGACGATCCATGGTGTCGAAGTAACCC
CTTTTTGAATTCACCAGAGCTTGCGGTTGAGCTTTGTAATGTGTTACATC
GTACCATATTAACAAGGGATCGGCCATCCATACAAATTCTTGTCATGGAT
GTTCTTATTTCCCTTCTTGAAATGCGTAAATTCCTTATTTCAAATGAAAG
TAGTAATGGAGAGACGGAAGAAAAGAGGAAAATACTTCCTGAAGGAGGCA
CTGACGGAAAAATAGAGCCTGGACAATCTGTTGTATTTGCTTCATTAGAA
GTCTGTCTCTGCATATTGATTCGCCACTATCCCGACTTATCAACCCGCGC
CACAAACTTGAATTCATTCACGGCTATTCAAGCAAAATCCTTTTCCATAG
TCATTAAACAGCAGCAACAAACTCAACCAGAGCTCATTACTCGAGCTATT
AGTGCACTCTCACTCATTCCTGATCTTTGTTCACCTTCTGGAGCTCTTAC
TGTGCTACCTTCTGTACTGTATCTCTTGACTGGAGTTCTGATAAAAGAAT
CGAAAGCCCTTGTGGAAGACGCCTTTCGTGAGTCGGATGAGCAATCTCCA
CCGATTAGTGCATCCATTACTGCTATTAAAAATGTTCTTGCATTAAATTT
AGAGTTGCAGGAAGAAGAGGAAAAACGGTGGGAGGAACTACTAAGTAGTT
CCTTTGCACAAATCATCAAAGAATATGACTCCTTGGATGAACATACTCTA
ATTCTATGTCTAACACTTTTAATAATACGAGCTCCAACCTCAGTCACCCT
CTCTTTGAAAACTCACACTCTAGATCCTTTCAAGAAATGTCTCAGGGATG
ACCAGGAGAGTCGAGTAAAGCTACGATGCATTCAAGCCCTTCAGTCAGTG
TTCCAGCATCCCCAAAAGAGAATATCTCATTTTTACATTGTTTCCCTCTC
CCCTCGTCTATTTCAAATCAGTTTCATGCTTCATTCAAATTTGAAAAGCG
AAACAGATCTTCGATTTCTTCTCGAGTGTCACAATTTGATCGAGTCTCTT
ATTGTTAAAGGAGGATCCCCTAATGCCATTCTACAGTTCTTAATACCAGC
ATTAGTTAATCAACTCCTCTCAGGAGATGCTTTATTTAAATGTACGAATA
AATTCGTTCTAGGACTGCACGACAAAGCCCTTAATAAATTGACACTGATT
GGACAAAAATATCCCAGTGAATTTAAAGATACTTTAGGTGGACAAAAGGC
TCTAAAAAATAAGTTGGAAACGGCTCTTAAGGACAATCAGTTGAGATTTA
GTCAAAAATCCCAGAATATTCCTTCAACACCTTCAAGTCCAATTAAAAAC
ATTTCTGGGGATCATCAAGTTTGTAATGACTCGAATAAACAATCCTCGAC
TCCTAGTATTAAACTCTCTACGGATTTTAGTAATTTTGTAGTCAAGTAA

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