EMLSAT00000000825, EMLSAT00000000825-696672 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000825
Unique NameEMLSAT00000000825-696672
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1137supercontigLSalAtl2s1137:91937..94288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000825 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000825EMLSAG00000000825-683591Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003609EMLSAE00000003609-712537Lepeophtheirus salmonisexon
EMLSAE00000003610EMLSAE00000003610-712538Lepeophtheirus salmonisexon
EMLSAE00000003611EMLSAE00000003611-712539Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771928auto771928Lepeophtheirus salmonispolypeptide
EMLSAP00000000825EMLSAP00000000825Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000825

>EMLSAP00000000825 ID=EMLSAP00000000825|Name=EMLSAP00000000825|organism=Lepeophtheirus salmonis|type=polypeptide|length=373bp
MSERTSTLLEVVNRVREMNESSARLQGSPTCSPQSTSSHHLGFPSSAFVP
RIKRDNSSSEINFVSPTLPPPSSSSANNGGGGGGGEDMVSDDEQQPLDFS
SKKIKRERVGCSPEYGLLGSDGHSDNSSNASGSSPHVSPKHHSAXPSNLG
SLTPTLLPLPXHSSTPNSTAATLNLLSVLQQQQQQQQQMPTNTPPYNPLL
LAAAAAGNFSQSVVSQPPPXXNIQANLAELSKVSNESQESYQKFRESMLQ
KIEMTRPKGRRSSSGNNGFSPCNNNNSSNNNPLETSPHNHNHGGLKDDAY
WERRKKNNEAAKRSRDARRNKENEVAVRAQFLEQENIQLKIELAQLRSEI
LNLRDELIKVIYCTYILNHLNCG
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mRNA from alignment at LSalAtl2s1137:91937..94288+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000825-696672 ID=EMLSAT00000000825-696672|Name=EMLSAT00000000825|organism=Lepeophtheirus salmonis|type=mRNA|length=2352bp|location=Sequence derived from alignment at LSalAtl2s1137:91937..94288+ (Lepeophtheirus salmonis)
TCATAATGAAAATGACGTTTCATAAAGACATTGCTCATTTTAATGAGGCG
ATTGACTTCTCAAACCCATTTCCCAATGACTGCATATCACATCATAAAGT
ATCTTTTGAAATTCCATACCTGATGAAGCCCAGTACTTTATCCATGGAGC
CTCAAAGAAAATGTGAGAGTATGGACTCTCTTTCTGGAACATCCTCTATT
TATCAAGAGAAACGAAGGAAAAACAATGAATCGGCAAAACGATGTCGAGA
CTCTCGGAGAGCCAAAGAGGAGGAAACGGCACTAAGAGCTGCATTTTTAG
AACAAGAAAATGTGTTCCTCAAATGGGAGTTGGCAGCTCTAAAGACGGAG
ACAGAGAAATTGAGGATTATTCTATTAAGTTTCAATCATAATCCTTCTCC
AACTATGAGACTTGACTTATTTTTAGACCGGGCCTAGTGCCTTTAGGTTC
TGTTATATAAAAAGAGTGTTATGCTAAATAATATATAAAACTGAGTTTTG
TGTATGAAAGAGATATTTTAATATTGTTTTTTGTTCGCTCTTAATAAAGC
ACAATTGTGTGTGTGTGTGTATCCCTGTATTTTCTCTCTGTTGTCGATTG
CTAATTATTTTTTTTTTCTTCATTGTAATTTTTTCTTTACAGGTGGATAA
TTAATTTTTCACACAGCAAACGACAGGATGAGCGAAAGGACCTCAACTCT
GCTCGAAGTTGTAAATAGAGTAAGGGAGATGAATGAAAGCAGTGCCCGAT
TGCAAGGATCTCCAACTTGTTCTCCACAATCGACATCATCACATCATCTT
GGATTTCCATCTTCAGCATTTGTTCCAAGAATCAAAAGAGACAATAGCAG
CAGCGAAATTAACTTTGTATCTCCAACACTTCCTCCACCTTCATCCAGTT
CAGCGAACAATGGTGGTGGTGGTGGTGGTGGTGAGGATATGGTCTCCGAT
GACGAACAACAGCCACTGGATTTCTCTTCCAAAAAAATTAAACGGGAAAG
AGTGGGATGTAGTCCAGAGTACGGATTATTAGGAAGTGATGGACATTCGG
ACAATTCCTCCAATGCCAGTGGTTCCTCACCTCATGTGAGTCCTAAACAC
CATTCTGCAMCTCCTTCCAATTTGGGATCCCTCACTCCAACATTGCTTCC
GCTMCCTMCTCATTCCTCCACTCCCAATTCTACTGCTGCCACATTAAATT
TACTCTCGGTTCTACAACAGCAGCAGCAACAACAACAACAGATGCCAACC
AATACTCCTCCCTACAACCCTTTGCTTTTGGCAGCGGCTGCAGCAGGGAA
CTTCTCGCAGTCCGTTGTGTCACAGCCMCCTCCGKTATMAAATATCCAAG
CCAATTTAGCCGAGTTATCCAAAGTGAGCAATGAGTCGCAGGAAAGCTAT
CAAAAGTTCAGGGAAAGTATGTTACAGAAAATTGAAATGACAAGACCCAA
GGGCAGGCGTAGTAGTAGCGGKAACAATGGGTTTTCGCCATGTAATAACA
ACAATAGCAGCAACAATAACCCGCTCGAAACCTCTCCACATAATCATAAT
CACGGAGGTCTTAAGGATGATGCTTATTGGGAGAGACGGAAGAAGAATAA
TGAAGCTGCCAAACGATCACGGGATGCACGAAGAAATAAAGAAAATGAAG
TCGCAGTGAGAGCTCAATTTCTGGAACAGGAAAATATTCAATTAAAAATC
GAATTAGCACAATTAAGATCTGAGATACTCAACCTTCGTGATGAAGTTTA
TAAAAACAATGGAGCACTTGAGAGCTTGCAATCTTCGTAAAAATAGAATC
AATTCGCAACTTCCTCTTCTTTCAACGGCCCTCATTCTCTCTATCTCTTA
AAAAACCTAACTACCCCCTTTTATTATTTCTTATTATATGCCTTTCGCCT
AAAATGTACAAATATATTTTTTTTTACAATTATTTTTTAAATAATAAGCA
GAAAGTGTTAATATTAATATTTTCATATTACTATTCTTGTTAAACCATGA
GCTATATTTAAATTGATGCTCAAAAACTAAACTTGGCAATTTTTTTTATG
TCTAAAAATATTTATTTAAATACAAGAGATTTTGTGAGCTTTTAAATGTT
CCGTTTGTAATTTCTTCTCCCTTATTTCTTTATATACATATATGTATACT
GTAATATGTATACACATCTATTTTTGCATTTATGAGCTTATAAAAGTAAT
ATATTGTACCTATATATTAAACCATTTAAATTGTGGATAGACATATCTGT
CAAAGAGTAAGTGATATTTTTAGATATATATTTTTTTGTAATATTCTGCA
ATCGGCACTAGACTGAAACTTAAAATATTTTTTATATAAACAACATCAAA
AT
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