EMLSAT00000000846, EMLSAT00000000846-696693 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000846
Unique NameEMLSAT00000000846-696693
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1142supercontigLSalAtl2s1142:195200..196664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000846 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000846EMLSAG00000000846-683612Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003704EMLSAE00000003704-712632Lepeophtheirus salmonisexon
EMLSAE00000003705EMLSAE00000003705-712633Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774303auto774303Lepeophtheirus salmonispolypeptide
EMLSAP00000000846EMLSAP00000000846Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000846

>EMLSAP00000000846 ID=EMLSAP00000000846|Name=EMLSAP00000000846|organism=Lepeophtheirus salmonis|type=polypeptide|length=464bp
MSSTEDETNSKESPFQDEKEEDTTTFSDLGLTEVLCEACESLGWKTPSKI
QKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSLLEKPQRFFALVLTP
TRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATP
GRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEG
RKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLK
YKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMS
QNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYI
HRVGRTARAGRSGRAITFVCQYDVELYQRIETLIGKKLPLYSGATEEEVM
VLGDRVNEAVRFAKMEMKDMEEKKKEKGKKRKSAADDYDDGENFTGVRNR
FKKSDNKKKRKTVR
back to top

mRNA from alignment at LSalAtl2s1142:195200..196664-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000846-696693 ID=EMLSAT00000000846-696693|Name=EMLSAT00000000846|organism=Lepeophtheirus salmonis|type=mRNA|length=1465bp|location=Sequence derived from alignment at LSalAtl2s1142:195200..196664- (Lepeophtheirus salmonis)
ATGTCATCAACAGAGGACGAAACCAATTCCAAAGAAAGTCCATTTCAGGA
TGAGAAAGAGGAGGATACAACAACGTTTAGCGACCTGGGTCTGACAGAAG
TCCTTTGTGAAGCTTGTGAGTCCTTGGGATGGAAGACACCATCCAAAATT
CAGAAAGAGGCCATTCCTGTAGCTTTAACTGGTCGGGATATAATTGGATT
GGCGGAAACGGGATCTGGAAAGACTGCAGCCTTTGCTCTACCTGTATTAC
AGTCTCTTTTAGAGAAACCCCAGCGATTTTTTGCCCTTGTTCTTACGCCC
ACTCGTGAATTGGCTTATCAGGTTCGAATTCATTACATGATTCATGATTT
ATTAACTTATAAATATTCATTTATACCCCCTTATGTTTTAGATTTCTGAA
CAGTTTGAAAAACTAGGCAAATCCATTGGTGTGAAATGTGTGGTCCTCGT
TGGAGGAATGGACATGGTGAGTCAGGCACTTGTCCTAGGAAAGAAGCCTC
ACATCATCATTGCTACTCCAGGGCGACTCATTGATCACATGGAAAACACG
AAAGGATTTGATCTTCGCTCTCTCAAATACCTTATCATGGATGAGGCAGA
TCGTATATTGAACATGGACTTCGAAATTGAAGTAGATAAAATATTAAGTG
CACTTCCTCGTGGAGAGGGGCGGAAAAACATGCTCTTCTCAGCTACAATG
ACTAAAAAAGTTGCCAAATTACAAAGAGCCTCTCTTCGTGATCCTGTTCG
GGTTGAAGTCTCCTCTAAATACCAAACAGTGGATAAACTTCTACAATATT
ATCTTTTTATACCACTTAAGTATAAAGAGATGTATTTGGTTCATATAATC
AATGAGTTAGCCGGAAATAGTTTCATCATTTTTAGTTCTACTTGTAGTGG
AACTCTCAAACTTGCACTTCTTCTACGAAATCTAGGATTCACTGCTATTC
CTTTGAATGGGCAAATGTCTCAAAACAAACGCTTAGCTTCTCTCAACAAA
TTCAAAAACAAAAGTAGGTCCATACTCATTGCAACTGATGTAGCCTCGAG
GGGGTTAGATATTCCTCACGTAGACGTTGTCATTAATTATGATATCCCTA
CACATTCCAAAGACTATATTCATCGAGTAGGTAGGACGGCACGTGCTGGA
CGATCCGGACGAGCAATTACATTCGTTTGTCAGTATGATGTGGAGTTATA
TCAACGGATTGAAACTCTCATCGGTAAAAAGCTACCCCTCTACTCGGGAG
CTACTGAGGAGGAAGTTATGGTATTAGGAGATCGAGTCAACGAAGCAGTT
CGTTTCGCCAAAATGGAGATGAAGGATATGGAGGAAAAGAAGAAAGAAAA
GGGGAAAAAGCGAAAATCGGCAGCGGATGACTATGATGATGGAGAAAATT
TTACTGGAGTTAGAAATCGTTTTAAAAAATCGGATAATAAGAAAAAAAGA
AAGACAGTGCGCTAG
back to top
Add to Basket