EMLSAT00000000852, EMLSAT00000000852-696699 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000852
Unique NameEMLSAT00000000852-696699
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1142supercontigLSalAtl2s1142:6879..10647 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000852 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000852EMLSAG00000000852-683618Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003740EMLSAE00000003740-712668Lepeophtheirus salmonisexon
EMLSAE00000003741EMLSAE00000003741-712669Lepeophtheirus salmonisexon
EMLSAE00000003742EMLSAE00000003742-712670Lepeophtheirus salmonisexon
EMLSAE00000003743EMLSAE00000003743-712671Lepeophtheirus salmonisexon
EMLSAE00000003744EMLSAE00000003744-712672Lepeophtheirus salmonisexon
EMLSAE00000003745EMLSAE00000003745-712673Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768853auto768853Lepeophtheirus salmonispolypeptide
EMLSAP00000000852EMLSAP00000000852Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000852

>EMLSAP00000000852 ID=EMLSAP00000000852|Name=EMLSAP00000000852|organism=Lepeophtheirus salmonis|type=polypeptide|length=256bp
MSDVVLGFDDINGYLRDSSFSGAFVSLSPKEMQHEKKTPRNWNPTLKENS
IVFSLLKDKTVLLNAEFYLSETEEELTVDIKGIVSKPTFMNIGLKTYFNL
AGYETGPSGIEGHVVQINANEISEKSGGEFRYVDLEENDLDLRIPQTLDE
IIFKESLKSGRYFIVDRSISEFHRFVGRVSHTDSKRYLEVYSNQPAVYFD
LSKESKSNGKNETKLEKNSGFEMKMVTLLDNDQISNINPGDLYTHTIKYK
FGVDEF
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mRNA from alignment at LSalAtl2s1142:6879..10647+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000852-696699 ID=EMLSAT00000000852-696699|Name=EMLSAT00000000852|organism=Lepeophtheirus salmonis|type=mRNA|length=3769bp|location=Sequence derived from alignment at LSalAtl2s1142:6879..10647+ (Lepeophtheirus salmonis)
TTTGAAACTATTTTCAAATTAGCAGCACTCGAAGTTTAATCTGGATTTTG AAAGGAAATCATTTTTACATAGTATCTACGAAGGTAAATCAGTTATCCTT TATATTGTAGTGAAGTAGTAAATTTACACCCTTTGATAGAATCTTTCAAT TACCTATCCTTATTATTGTTAATTGTTATTTAATTATTATGTGTATGTAT GTATGTAAATTTATATTGATATTAAGATATTTCAAATTGTTTAGAAGGGA TTGATTGTTAAAGGGACTTCTTTTTTATTATTAGTTGCATAAAATAGTTA TTAAATGATGAAAATCCGAGGCTTTGATTGATTTGGATTCTATATTTCCA AGTTTGTCAAATATTTTAATTAATAACTTTTTAATGGATGTGTCTTTATG GCTAMATTTAARTCAAAWATCACCMTTTWGTGTATTWTACAAWGTAGTTG TTACATCATTTATGTACAAAAGTAGTTAACATTTTCATATCAATAATTGA ATCATATATTCTCATTCAAGTACTTACTACTTTTGTTCCATTTTTTTGTT GATAATAATTCCTTTGTTTGTTATTAATGATTGTATATTTGACTTTTACA AATTCGGTGTACAAGTTTAAAAATATATACTTTTTAAGCGAATTAATATA TTATTCCACATTGTGAACTCAGCAATCATATTAACAAGTTACTTTTTGTG ACTAACATTAATAAAGGGCATTTTAACTGTCCATATTTGTCAAAAACTGT AAGGAAATTATATTCAATAGCTTTTGTAAAATCTACGTAACAAATATAGT TATAAATATTTTGATTTAGAAAACTTTAATTGCCGATATCTCAAAACAAT TATACTGGTACTGCACTTGATACATTTTTGCAACATATTTTAAATATTGA TATAATCTATAAATGACATATTTTCATGAAACATTTCCGCTTCAATCTCT GTTAATATCTATAGCAGGTAAGAGGTATGATTAAAACATACTAGAAAAGT ATTTCATTATTCTGATAATCCGACCTCTGAATATAAAGCACTCAAGTTTT GAAATCAGTTACGTCTAAGCGTTTTAATCTTAATTAATGATTTCATTCAT TTTATGACATCATACGGCAGTTTTCTCAAATTCTGATGCACGAGTAGCTT CGGGATTCACCCTAAACATTGACTGTTAAAAGGGAAAGGCACAATTTAAA GAAAAAAAACATACGGTAGCATGATTTCTGTATTATTTTTCCTGATGTTA ACTCTTCAGCAGAGTTTAAAGAATAGCTATTAATTATTTAATCGCTTGAA TTTATAATTTTATCACTGATTGAGTATGAAATTACCCGATTTCTAAAAGA AAGCCCTTGATTTATATTAATCGATATAAAAATTCAAATTCTATGTAATT CCTTTTTTATTTTTTAATCATGAAAGGAAAATACATTATATATATTTATT TATTACAAAAAAAAAAAAATGACCTTGATGAATAAACAAAGACATTAGTT TGCTTCAGGTTAAACATTAAATGACACTTTGCTTGTTTTGAAGCCTTTAT AACGGGAGTGGGTGGCTTCCATTAAAAAAATTGTAGTTCTATATAAGATA TTTGGAACCTTTTGGATTGATAAAGCATGCAAAATACAATGTGTTTAGGG AAAGCGTGACATTATTGAAAATGCATGAATCTTATGCTAATTGCGTGAAA AATGTGAGCCTTGTACATATTGTCGGGKAAAAAATGTACATAGTTCCAAA TTTTATAAAAATGTTTTTTATTAATCTCGGTAGTTTGATTCTTTTTCCTT TCACTCAATCTTCTAATATCCGACATTTGAAGAACTTAATTTAATTATAC GGGAATTAATTGTACATTGTTAGTTTACCTTACATATCTTATATCTAAGA AAAGTATGTAATTGTACGGGTTGTTTTTAACTTTTGTCATATTAATGCAC TTTACAAGATTTATTTGGATTCTCATCAAAGAGTGTCCTTGAAAGTAATT AACTTTATTTAGAGCTATTAGTGTAAAAGATGTCGTGTTACAATCAATGT AAATGCTTTGAGCAAGATATACGTTTCAATGAAATGCTTCCTCTTGCATT TTTGGTTGTTGGATTAAATGGATTTTTTGCATGGTCATGCGTATAAATTT ATTAACCAACGCATATTTATATATCCACAGATCTCGTAATCAAGTCAAAA AAATGATCACTATAAGAGTATTCATATTTTTATTGCTTAATGTCCAATTC ATACTGTCAGAAGACTCCATTCAGAGTATATTTAAACGACAAAGTGGTAA TGCTCTTCAAATCACAGAGTTAGATCATTGGACTCTGCCTCCCAAATATG TCAAAAGTATGAACATACACATATATACGTGATATATTGATTATGAAACA TTTTTTTATTTTAATTTCAGATGGAGATGATAATAAGGTCCKAAGATTTC GATTAGAGTCACCCCAAATGACAATAGAAATGATTAGCTTGGATCTGATC ATTACGTNCAATCAATGTAAATTTATATTCTAAGATTAAATATTTTGATA TCACCAAAATATTTCTATATAATTTCTAGATTCCAAATCAAAAGAATGAA ATGAGTGACGTTGTTTTAGGATTTGATGATATCAATGGATATTTGAGGGA TTCGTCATTTTCTGGAGCCTTTGTATCCCTGTCTCCCAAGGAGATGCAAC ATGAAAAGAAAACCCCAAGAAATTGGAATCCTACTCTCAAGGAGAATAGT ATTGTTTTTAGTCTTCTTAAAGACAAAACTGTTTTACTCAATGCAGAGTT CTATCTCTCTGAAACTGAAGAAGAGTTGACAGTTGATATCAAGGGAATAG TGAGCAAGCCAACATTCATGAATATTGGACTCAAAACTTATTTTAATTTG GCTGGATATGAAACTGGTAGTTAAGGTTATAATGTATCTATGAAACTTGT TAAATGATTTTTTTAACTTCATAGGTCCATCAGGGATTGAGGGACACGTC GTACAAATCAATGCAAACGAAATCTCTGAAAAGAGTGGAGGAGAATTTAG ATATGTTGACTTGGAAGAAAACGATTTAGATTTGAGAATTCCTCAAACCC TTGATGAAATTATTTTCAAGGAATCATTAAAAAGTGGTAGATACTTTATT GTTGACAGAAGTATCTCTGAATTTCATCGATTTGTTGGAAGAGTATCTCA TACCGACTCCAAAAGATATCTTGAAGTGTATTCTAATCAGCCAGGTAAAC CTAGCTCAACTTGGTCATTACTACGGGGGTTAATTTCGTATTATTATTAC TCTTTTTTTAGCCGTTTATTTTGATCTCTCTAAAGAATCCAAATCAAATG GAAAGAATGAAACTAAATTGGAAAAAAACAGTGGATTCGAAATGAAAATG GTAACTCTCTTGGACAACGATCAAATTTCAAACATTAACCCTGGAGATTT ATATACACATACTATTAAATATAAATTTGGTGTTGATGAGTTTTAAAGAC CCATTAATATTTTTTTACAAGGTAATTAATTTATCAAGATTAATTACATT TTATAGCAATCCTTAACATTTTGTCTTTATACATGCATTAGAAAAGGTTT TACTTTTTTTGTGTATTTAAAAAAAGTTCCGTTATTGTGATTTTTTGTAA TCAAAACAAATACAAAATTAAATATCTCATTGAATCGATTTAGCTTATAA TTGTATTGAAGGAAGCCTATATAAAGGGTGACTTGCATTTTATTTTTATA CTATGGACATCTGAGTACG
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