EMLSAT00000000876, EMLSAT00000000876-696723 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000876
Unique NameEMLSAT00000000876-696723
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1152supercontigLSalAtl2s1152:52983..53927 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000876 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000876EMLSAG00000000876-683642Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003838EMLSAE00000003838-712766Lepeophtheirus salmonisexon
EMLSAE00000003839EMLSAE00000003839-712767Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770753auto770753Lepeophtheirus salmonispolypeptide
EMLSAP00000000876EMLSAP00000000876Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000876

>EMLSAP00000000876 ID=EMLSAP00000000876|Name=EMLSAP00000000876|organism=Lepeophtheirus salmonis|type=polypeptide|length=299bp
MSKLNISINDSKLGLNKSLTRLPSSQHYVPFHSSCTAHSAGSINNRISLH
CNNGTASPTKSMSSGSVSIVAQQLLVKVNISQINQDLIRQVSSVQSCKNL
EQLQPHLKSDIYHTVNSSENHHITFPLQLSQGNMPCHNSGSICIPSRQLY
FGVSYPSTSVSNQPTSSLTSSKSITPDVSSIRKIVSNFIPQKFVFDSVSS
DSSEHEHGPYPLKDTVQPFCEKHFTKIKIYMDSLNANLTLPVKYTIEECK
GKKHAKIHFACQERLEDYCLYKTTLYSIKTRNPNTWIHILFLGLQVVPF
back to top

mRNA from alignment at LSalAtl2s1152:52983..53927-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000876-696723 ID=EMLSAT00000000876-696723|Name=EMLSAT00000000876|organism=Lepeophtheirus salmonis|type=mRNA|length=945bp|location=Sequence derived from alignment at LSalAtl2s1152:52983..53927- (Lepeophtheirus salmonis)
ATGTCTAAACTAAATATCAGCATTAATGATTCGAAATTGGGTCTAAATAA
GTCATTGACTCGATTGCCTTCGTCTCAACATTACGTACCTTTCCATTCCA
GTTGCACTGCTCATTCTGCTGGTAGTATTAATAACAGGATTTCTTTGCAT
TGTAACAATGGTACTGCATCTCCTACTAAATCCATGTCATCAGGATCAGT
TTCGATTGTTGCACAGCAATTGCTTGTTAAAGTCAATATTAGTCAAATTA
ATCAAGATTTGATACGTCAAGTATCTTCAGTTCAAAGTTGCAAGAATCTT
GAACAATTGCAACCACATTTGAAATCAGATATTTATCATACCGTCAATTC
GTCGGAAAATCATCACATTACATTTCCCTTACAATTGTCTCAAGGGAATA
TGCCTTGTCATAATTCTGGGTCTATTTGTATTCCTTCACGCCAGTTATAT
TTTGGTGTATCTTATCCTTCTACATCCGTTTCCAATCAACCTACTAGTTC
CTTAACCTCTAGTAAATCTATAACTCCTGATGTATCTTCGATTAGAAAAA
TAGTATCAAATTTTATTCCACAAAAATTTGTTTTTGATTCTGTGTCTTCC
GATTCGTCAGAACATGAACATGGTGTAAATTTTAAGGCAATGAATTAGAA
TTGTATCTCCATTTTTGAGCCATATCCGTTGAAAGACACCGTTCAACCCT
TTTGCGAAAAACATTTTACTAAAATTAAGATTTATATGGACAGTCTCAAT
GCAAACTTAACTCTTCCAGTGAAATACACTATTGAAGAATGCAAAGGCAA
AAAACATGCTAAAATACACTTTGCATGTCAAGAACGACTGGAAGATTATT
GTTTATATAAGACCACATTATATTCTATAAAAACTCGAAATCCAAATACA
TGGATACATATACTGTTTTTAGGGTTGCAGGTTGTTCCATTTTAA
back to top
Add to Basket