EMLSAT00000000880, EMLSAT00000000880-696727 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000880
Unique NameEMLSAT00000000880-696727
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1152supercontigLSalAtl2s1152:93052..93616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000880 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000880EMLSAG00000000880-683646Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003846EMLSAE00000003846-712774Lepeophtheirus salmonisexon
EMLSAE00000003847EMLSAE00000003847-712775Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771935auto771935Lepeophtheirus salmonispolypeptide
EMLSAP00000000880EMLSAP00000000880Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000880

>EMLSAP00000000880 ID=EMLSAP00000000880|Name=EMLSAP00000000880|organism=Lepeophtheirus salmonis|type=polypeptide|length=169bp
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP
YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCYSVVSPSSYENVREKWVPE
ISHHCQRTPFLXVGXQIXLRDEAATIEKLTKNKQKPLSMEVGEKLAKELK
AVRYVECSALTQVSNISST
back to top

mRNA from alignment at LSalAtl2s1152:93052..93616-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000880-696727 ID=EMLSAT00000000880-696727|Name=EMLSAT00000000880|organism=Lepeophtheirus salmonis|type=mRNA|length=565bp|location=Sequence derived from alignment at LSalAtl2s1152:93052..93616- (Lepeophtheirus salmonis)
ATGCAAACGATTAAGTGTGTGGTGGTGGGCGATGGAGCCGTGGGTAAGAC
GTGCCTCCTCATTTCCTACACGACGAACAAGTTTCCGTCCGAGTACGTTC
CAACAGTGTTTGACAATTATGCAGTGACAGTGATGATTGGGGGCGAGCCC
TACACTTTGGGCCTGTTTGATACAGCGGGGCAAGAGGACTATGATCGGCT
GCGTCCCCTGAGCTACCCGCAGACGGATGTGTTCTTGGTGTGCTACTCCG
TCGTGTCTCCCTCCTCTTACGAAAACGTGAGGGAAAAGGTAAGAAAGACT
TGATTGTGGCCCTGAGCTGTGACTCACTCCTCTTGTCATCTAGTGGGTCC
CGGAGATCTCGCACCACTGTCAAAGGACGCCTTTCCTTCMCGTGGGAKCT
CAGATCGKCCTGCGGGATGAGGCGGCCACGATCGAGAAGCTGACGAAGAA
CAAGCAGAAGCCCTTGAGCATGGAAGTGGGAGAAAAGTTGGCCAAGGAGC
TCAAGGCGGTACGCTACGTGGAATGCTCCGCTTTAACTCAGGTATCCAAC
ATATCATCAACCTAA
back to top
Add to Basket