EMLSAT00000000897, EMLSAT00000000897-696744 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000897
Unique NameEMLSAT00000000897-696744
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1157supercontigLSalAtl2s1157:162526..164042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000897 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000897EMLSAG00000000897-683663Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003931EMLSAE00000003931-712859Lepeophtheirus salmonisexon
EMLSAE00000003932EMLSAE00000003932-712860Lepeophtheirus salmonisexon
EMLSAE00000003933EMLSAE00000003933-712861Lepeophtheirus salmonisexon
EMLSAE00000003934EMLSAE00000003934-712862Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773615auto773615Lepeophtheirus salmonispolypeptide
EMLSAP00000000897EMLSAP00000000897Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000897

>EMLSAP00000000897 ID=EMLSAP00000000897|Name=EMLSAP00000000897|organism=Lepeophtheirus salmonis|type=polypeptide|length=157bp
MADEFDFGEGDAGASETFPMQCSALRKNGFVMIKGRPCKIVEMSTSKTGK
HGHAKVHMVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDIDDGFLS
LMDDSGNTRDDLRVPEGEIGDEIKVAIAESRDILCXVLSACGEESVIATK
VNTAVDK
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mRNA from alignment at LSalAtl2s1157:162526..164042+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000897-696744 ID=EMLSAT00000000897-696744|Name=EMLSAT00000000897|organism=Lepeophtheirus salmonis|type=mRNA|length=1517bp|location=Sequence derived from alignment at LSalAtl2s1157:162526..164042+ (Lepeophtheirus salmonis)
TTTCTTCCTTTTCTTCAGTTAACTATTCTTTATGAACCAATTTACAATTG
TGAGTAATTTTTATTTTGGTTTAATTACTCTAATACATTTAAAATCGACT
TCCTAAAAATTTGATGTTTCAAGAAATCTTCGATAAAATACAGATACGAT
CAGGTAAACTTTAGAGTTTTGTTTATCAAACAGCAAAATTTTTAAAAAAT
CGACCGACTGACATAGACATTATGATATCTTGCAAAATTGTATTCACAAT
GACTGATAAAAAAAAGTTAGATATCTATAAAAAAAACCTTCAATCGAAAG
TGTGATGTTATACCATAGGGAAGTGCGTTTGTATATTATACATTTTTAAT
TATAATTTAAATTTGTTATTACTCATTGTATTTTAGATTTTTATGTTAAA
TACAATAATATATTTATTAGTTTATAATTTGAGATATAATCTTTTGATTT
AATGAAAGGTTGCGTTGTAATATAATTAGAAAAAATAACCTAAGCAGATG
TGGTCGGCTATAGGATGTGGCATCTACCTATATAAATATAAAATTTAGAA
ACTGGAATAACTGTGCTTATCCAAGAAATATAAGCCCTCTTGGCGTCAAC
AAAATTCTACACTGAATTTACATCGCAGGAACCTTTTAAGAGTCCTTGAT
GAAGTTATTTTTGATTTTTAGTAACCGAGCTACTATAAACTCTGCTGTGA
AGGAAATGGATTTTTGAATGGATCTTTCCTCTTTTTTCCCCTTAGTCTTT
CCCTTTTTGTTTCTTTTTTGGATTCTTTTCTTTCTTTTGTTTTCTTTTAG
GGTAGTTTCCTTCTTTTCTTTCCTTAGTGGAAGAGTCAAGACCTCTTGGA
AGTAGTTGAGAGGACAACGTGTTTCTGAGTCTTGGAATTAAGAATTGTGG
ACCTAGAGGAATTTAGCAGAATGGCAGACGAATTTGATTTTGGTGAAGGA
GATGCAGGAGCTTCCGAGACGTTCCCCATGCAGTGCTCCGCGCTTCGTAA
AAATGGTTTCGTGATGATAAAGGTGAGTGTGTGTGGGCGTTGGGGCTAGG
NTGCTAAGTAGTTGATCTTTGTGCCCCTAGGGCCGTCCCTGCAAGATAGT
GGAGATGTCCACTTCCAAGACGGGGAAGCACGGACATGCCAAGGTGCACA
TGGTGGCCCTGGACATCTTTACGCAAAAGAAGTACGAGGACATTTGTCCC
TCCACACACAACATGGATGTTCCCAATGTCAAGCGCAAGGATTACCAGCT
CCTGGATATCGATGATGGCTTCCTCTCCCTCATGGATGATTCGGGTAACA
CAAGGGATGACCTGCGTGTTCCAGAGGGAGAGATCGGCGATGAGATCAAA
GTGGCCATCGCGGAGTCGCGGGATATTCTCGTAAGTAGCACAAGGGGCAG
AAGTAGCAGAAGTAGCAGAGCTTGMCCCTCTCTCCCTCTCTCTAGTGCWC
CGTTCTCTCGGCTTGTGGGGAGGAGTCTGTCATTGCCACCAAAGTGAACA
CCGCTGTCGATAAGTAA
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