EMLSAT00000000907, EMLSAT00000000907-696754 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000907
Unique NameEMLSAT00000000907-696754
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1159supercontigLSalAtl2s1159:22987..23984 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000907 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000907EMLSAG00000000907-683673Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003974EMLSAE00000003974-712902Lepeophtheirus salmonisexon
EMLSAE00000003975EMLSAE00000003975-712903Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769562auto769562Lepeophtheirus salmonispolypeptide
EMLSAP00000000907EMLSAP00000000907Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000907

>EMLSAP00000000907 ID=EMLSAP00000000907|Name=EMLSAP00000000907|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MTEARCSSIIFPPPVISIPEEDEYPSSLGFPSSSSTTEYSISDCESQDNG
LVGRSISCSPWSISPSRSPXFRHHRSETAARIRTQKKFSKSFKKAKEEPN
LSPYEHLSKITFLIKRSTFGRTGWKVMPEDIDIDMNRLPDSLLANIMGIL
REAELSGKAVPEKITLNL
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mRNA from alignment at LSalAtl2s1159:22987..23984+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000907-696754 ID=EMLSAT00000000907-696754|Name=EMLSAT00000000907|organism=Lepeophtheirus salmonis|type=mRNA|length=998bp|location=Sequence derived from alignment at LSalAtl2s1159:22987..23984+ (Lepeophtheirus salmonis)
TGAAAATTTAATTTTCATCGAATTTCTATAACCTCAGTTCAATGACAGAA
GCAAGGTGCTCCTCTATAATTTTCCCACCCCCGGTGATATCCATCCCGGA
AGAGGATGAGTACCCCTCATCCTTGGGATTTCCTTCATCCTCATCTACAA
CAGAGTATTCTATATCGGATTGTGAGAGCCAAGATAACGGATTAGGTGTG
TGAAATGTGATATGAGTGAATTATGTGATTTTCTATTAGTTAAAAGCGAG
GTTCATACCTACATATTTATATTCGACAAACATGAGTTTAAACGGCCATT
TTGTGACAATCTTCATTATGAAGAAGGGAATGAAAAGTTTAATTAGAAGA
GAAGGAGTCACATTGAATATAAATTACTTTGAAATAACCTTGAAAGGTGT
TTTTATAATTTAAAAAAAAAGTTTATAAAAATAATCGAAAGAACTTAATA
CTTTGGATCTTAAAAGAGAAAAACATAAAATATTCCTCACTTTTTTATTT
GATTTTTTTCCATATCAAGCATCAATCTTTTGACACATTATAATTATATA
AATGTAATACCTAATGATAAGTTAATTTTAAACATATTTCTCCCCTCAGT
TGGCCGAAGTATCTCCTGTTCCCCCTGGTCAATTTCCCCTTCTCGAAGTC
CCWCCTTCCGTCATCACCGCTCAGAAACTGCAGCACGGATCCGAACCCAG
AAAAAATTCTCCAAATCCTTTAAAAAAGCCAAAGAGGAGCCGAATCTCTC
TCCCTACGAACATCTCTCCAAAATAACTTTCCTCATAAAACGAAGCACAT
TTGGACGCACTGGTTGGAAAGTGATGCCTGAGGATATAGACATTGATATG
AATAGACTACCTGACTCACTCCTTGCTAACATCATGGGTATACTTAGAGA
GGCTGAGCTCTCTGGTAAGGCAGTGCCAGAAAAAATCACACTAAATTTGT
AATGGATCATGACAAAAACATAAAAGCAAAAAATGTATTACTTATTTT
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