EMLSAT00000000924, EMLSAT00000000924-696771 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000924
Unique Name	EMLSAT00000000924-696771
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1160	supercontig	LSalAtl2s1160:83444..88071 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000924 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000924	EMLSAG00000000924-683690	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004052	EMLSAE00000004052-712980	Lepeophtheirus salmonis	exon
EMLSAE00000004053	EMLSAE00000004053-712981	Lepeophtheirus salmonis	exon
EMLSAE00000004054	EMLSAE00000004054-712982	Lepeophtheirus salmonis	exon
EMLSAE00000004055	EMLSAE00000004055-712983	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771689	auto771689	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000924	EMLSAP00000000924	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1160:83444..88071+

protein sequence of EMLSAP00000000924

>EMLSAP00000000924 ID=EMLSAP00000000924|Name=EMLSAP00000000924|organism=Lepeophtheirus salmonis|type=polypeptide|length=248bp
MSPTASAPKLEPESHPLTQQVRMVLLGPPGSGKGTQSPKLRDHYNVCHLS
TGDLLRHEVRNKTPLGNQIKAVIDAGKLVSDETVLKLVENNLDKKECENG
FLLDGFPRTVPQAEQLDKLLQKRNEPGVDAAXEFAIDDSLLVRRICGRWF
HMSSGRSYHEEFKPSKVPGVDDVTGEPLVKRQDDNADTLRTRLNTYHNET
MPLIDYYQKRRIHRRIDASMDSSTVFENIKNIFADLKIQSHRIFLSYD

mRNA from alignment at LSalAtl2s1160:83444..88071+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000924-696771 ID=EMLSAT00000000924-696771|Name=EMLSAT00000000924|organism=Lepeophtheirus salmonis|type=mRNA|length=4628bp|location=Sequence derived from alignment at LSalAtl2s1160:83444..88071+ (Lepeophtheirus salmonis)
TAAAGAGAGAGGGAGAAACTCTGAGAGTTATATAAACCCTCATTGTAATA
AGTAACAATCAGCAAACATCTCGCCGGGACGTGCACACACTTCTCTTCCT
GGATAGCTTTTMCATATTTGTGGCCTCCCAATCAACTCCAAAATGTCTCC
AACAGCTTCTGCTCCCAAATTAGAACCAGAATCCCATCCTTTGACTCAGC
AGGTTCGAATGGTTCTCCTCGGTCCTCCAGGATCTGGCAAAGGAACTCAA
GTAATTCATTTTATTTTCCACTCTAATAAGTAATAACTTAACTCCACATG
GTAGCTGACAAAAACATAAGGGCAGAAATTGGCCATACTTAGTTTTTCCA
TCATTTCTGCTATGAAAGAATATATAATACCTTAACAGAAATAATTTTTA
TTCTTCTCTTGAACTATGATGATTCTTTATTTATGCCCTTGGTCTTGTAC
GAAAGGACAAATTGAATTGTCTGATAGTGCTATTAATTATACTATTATTG
AATTACGGATTAAATTCCCACTTTGAAAATGTTCATGATACTAATTACAA
AATAATAAATATGTTCCCATTGATAAATGAATAATAAGTATTAACAACCC
TTGATTTCAGTCTCCCAAGTTGCGAGATCACTACAATGTTTGTCACTTGT
CCACGGGTGATCTCCTCAGACATGAAGTCCGCAATAAAACTCCATTGGGA
AATCAAATTAAGGCTGTTATTGATGCGGGTAAATTAGTCTCCGATGAGAC
TGTTCTCAAACTTGTCGAAAATAACTTGGACAAGAAGGAATGTGAAAATG
GGTTTTTATTGGATGGTTTTCCACGAACGGTTCCTCAGGCTGAGCAATTA
GATAAACTTCTACAGAAAAGAAATGAACCAGGAGTGGACGCGGCTGKAGA
ATTTGCCATTGATGACTCATTGCTTGTTCGAAGAATATGTGGACGTTGGT
TTCATATGTCTTCGGGTAGATCCTATCATGAGGAATTCAAACCTTCTAAA
GTACCGGGTGTGGATGACGTAAGTAACTTGATCTTAAAAAACATTATTTA
ATTTATATAAATTTAAGTCTATTGACCTCATTAGTCTGATCTTGATCTTT
GGAATCTTATCATTCCATTTTTCAATAAATGTAATTTTTTTAGTGTAGAT
AGTTTTTAAATGTTCATCGANNNNNNNNNNNAGGAACTCGAGATTTAAAA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATCTTTGGAATCTTATCATTCCATTTTTC
AATAAATGTAATTTTTTTAGTGTAGATAGTTTTTAAATGTTCATCGATCC
CCCCCTTCTTCCGTATTAACAACTTTAATATGACATATGTAATAGTTTAC
TTATGTCTTATAAGTCCTAAATATATTTTTTATTGGGTAGCAAATAAAAT
ATTTTGAATATTCATATTTTTATAATAACTTGCTCGACTTTGTCTCAATG
AAGTCAGTATTTCTACTCTGAGTGAATGAAGTGTACTCTTTGACTCGTAC
AACTTATCTTAGATCTATATAATATTGTTATCAATTTATAATTATGATAT
GACTAATATATACCTAAATGGGAATAGCGAAGTTGAATTGAATCGTGTGA
AGATTTTCTAATAAATATTTTWWAAAAAGAAGTGATTTGCCATTGGCGTA
ACATCTATTTTGTATACAAGTTGACTAGTTAGACTAGTATATTTATGTAT
TAGCCAATTTTCGTATTCCTTGTTAACTATTRTTTATATCGTCTACTTAC
TAAAAATGGCTTAACTGTTAAACAGTTTGTAATATAACTTTTTAGAAGGA
AAAAAGCCCCAAAGTAAATTCAGAATATAATTTTAAAGAAAGTATTCATT
GGCGTCATTATTGTTGATGTGTCCCATTTTGGTGCCTAAAAAACCTAGTT
TTATAAGAATATAAACCCTTTTTTCATTCATATTTAAGGGAATAGTAAAC
TATTGGATACCAAATTGGGACCAATTAATAAAATAACTTAAACCTTACTG
CCTATTAAAAATATATCCCTCGAATGTATAGTTTTATTATTTATCAGTCT
AATATTTTTTTTAAATATTCCTATTTTCATATTGTAGACAGTAAGTTAAC
ACTATTACACAGGAAAGAATAAGATATTTTTCTCTAATTAACTTAATTTT
TATCATCCTTAATCGATCAAAAATATTTAGCGTACAAATCTAGCCATTTC
ATCAGAATTTTTAACATATATTTCTTGGATTTAATTATAATATCACTGTT
TATCTTTGGGATCAAGTTGTATTTTTATTGTTAAAGACATTTGTTGAAGT
TTCATTAAGTTTTATTGGAGATTCATACCTTTCAATTACTAAAATATCAA
CTATGTGCTCCCAATATGGCATGGCGTTGCTTTTAATTGTGATGCAATAT
ATGCCATTAGTGAAAAGACTCTATATAGGCTTAGGCTACCAAATATTCAT
ATACGTTAGACCCTCGTTCAAACTATCTAATATGCTCAACATATCTAAGT
TATCAATATCAATTTAATACATATGTAATAATTATTAAATTATATTTAAA
CAATGTGATAATATTTTCGAACTGCCTCACATTTTTAAAGATAACAAAGT
CATTATTGCTTTTTGTGTATTTAGTTATATAATGTTAAACAATCAATATA
AAAATATTTTTATTTATTCATTTAATAAAGGTCACGGGTGAGCCACTAGT
TAAACGACAGGATGACAACGCAGACACACTCAGAACTCGCTTAAATACCT
ACCATAATGAGACAATGCCTCTAATCGATTACTACCAAAAAAGAAGAATT
CATCGACGGATAGATGCATCCATGGACTCATCTACTGTTTTTGAAAATAT
CAAAAATATTTTTGCAGATTTAAAAAGTACGTTGACTGAAAGTAGAACTT
CCGTTCTTTAAGTCTATATTAATTATTATTCATTTACCTAGTTCATTTTG
TGGGCAGTGCAGATTTGCCTAAATGTCATTTACTTCAAATTTAACGCTTA
GTGATGCTTTTATCTTCAATTTTTTTGTATGAAAATCATTATAATAAATT
AATTAAATTATGTTTACCGTGTACCACAAATAACATTTTAGTGCTCAAGT
CTGGCAAATTTTATTACCTTTCAAGGCAGTCACCATTTATAAAGTAAGTC
TGACCAATATATGTGTATTTTCAAGTCGATGCCAATAAAAATATATTTGT
GTCTATAGTAAGCTGGTCATGACTTTCCATTTTCTTCAAATCTTTAAGGA
GCAAGTGGAAGTTTATAATATTGAAAAATGAGTTTCATCAAAATCTATTT
CAATATTTAAAGAAATAATGATTCTTCTAAAATATTTACCACTTTTATAA
TGGACTTCTTAAACTAGGTATCCAAATAACCCTTCAAAGCGTTTTTTTAA
ACCTATTTTTACTAATTATTATGTATTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGTACCTTGGATCTACGACTTCATTGTAAAACCTTTTTTT
CTTAAATTAATTCTGGTTTATACAGATTTTTGAGTATTCTTTAATCATTA
TTACAAAATCTCTTAAAATCAACGGACATTCAAAAATAAAAACTTTCGAA
ATAATATTGATTATAATGAACTAATCGTTTTTTATATTCATCTATTATAA
TCATAGGAAAAGTTTGTTAGTAACATTTTGACCCGAGTCTTGTTTATGTC
TGAGTAAAAATTTTTATTTAAAAAAATTGTGATTCTGTACTTTTGAATAT
AACTGTATTAAGAAAATATATCAGCTAAAAGGAATTTGATTCTTAATCAA
ATTATATATTTTAGTTCAATATTTATTAAAATTACTGAATAAGATTTGTG
TGCARGACTATATTAAGAAATGCTTAAAAATAATTTTATTACATCGTTAT
TTTTGTCCAATCTATTTTTGATTTTTTTATATTTGCAGAATTCGGTCCTA
ATATAAAAACATCTTAGTTACTCTGAATCAAACGGATTATTTATGTATTG
TGCTMAGAAAAGTCYTAAAGATATTTGCTTCAATAATTAATCATTGTTAT
TCTTTGACATTATTGATTTATTATTTGTAAAGTGATGAATGTTTTCAATT
AAATCTTTTTTTTTTTAACTTTTTTTTCTAGTTCAAAGTCACCGTATATT
TCTTTCCTATGATTGATATTGGCATATTAAGAACTTTAGATTGAATAATC
TTACATTAGTAAGATATTTTGATTTTGCTTTTCATTTAGTTTATTTTTAA
TGAGTATCTTTATGTGTTATGTTAAGGGTCAATTGACCCATTTCAATTTT
TGGCTTGGCCGAGGTTATATACTGATTAACCTCTTCATTTCAATATAAAA
TGTTTTGACTTTTCTTCATCCGGGTCAAGTACAAGTGGGTATAATTAGAA
AATTTTGAAAGGACGTGGAATGGTTGGA

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