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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1165 | supercontig | LSalAtl2s1165:73493..78626 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000937 >EMLSAP00000000937 ID=EMLSAP00000000937|Name=EMLSAP00000000937|organism=Lepeophtheirus salmonis|type=polypeptide|length=548bp
MDIPIRETLLLFMLFYSNNNVAGSSSSNQSIVISFEDRLEIIDGESTNVI
ESFSLSPTVNYIVSITSDGHKLFLSDYRDEGTTIFEVSLGKKLQILPLVE
QNSLNMAEGIAFDSKSKKLYFSDSRKRQISSILLTKEKKLQNVITMDSPH
GKLRDVAIDSCNRRLYWVNWDSNRPRIEFLNLDLNSYNSSATQIFIDSNL
SKPRSLIYDYWDLRLYWIDTDENHKYKIERAFSDSSGRXVVCKGNDNSPY
DITVTENHIFWSDWMNMVIWRAHKFGDKCELTAVKHLKSSRPMGIASLSF
PNKCIEKESVIKYSTELVEETNDNIMKPSTVTMSSEICQNYCIHGNCSLS
AINFPICHCQFGYSGSRCQNDLCHNYCLNKGICRFPTSNKGKPICQCIGE
FNGARCQFDMSKDRNNVQQIKESPTSKVFLYGFVLTSSSTGLLLLLLTAI
TVRTYREKKGVYVRQKNSLSEKFIDTPEPPKSEICIGKTTNCSSFVDIED
CCQMTLCDTPCVEATFRKPRRRGLSHGDDDKAVLLDNDSLVNKEENLF back to topmRNA from alignment at LSalAtl2s1165:73493..78626+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000937-696784 ID=EMLSAT00000000937-696784|Name=EMLSAT00000000937|organism=Lepeophtheirus salmonis|type=mRNA|length=5134bp|location=Sequence derived from alignment at LSalAtl2s1165:73493..78626+ (Lepeophtheirus salmonis)
TTGATTTCAAAAATTGATATTTATCTGTGAGGAAATATTTCCTACATTAT
TATATGGTATGCAGTATGTATATAATCGTGAGAAGGATCATGTTTCAAAG
TGAATTTTAATTACATCAATATTAGTAGTATACAACCACGGGTTGTAATT
GTTTAGATGAAAAACATCCCATTTTAGCCCTTAGCTTTCTAATTATGTCA
TACGTCCTCATATTGCTTTCCTTTGATCGTCACAAACAGTCAAGGTAAGA
AGAGGGTTTCTCGAAATATCTTTATTCCAACCCATTTAAAGAGTAATTAT
TATCATGTATTTAATAGCGATATGTTAAATACATGATCTAAATACACTCT
GAATATCGTAATGGATCAACACTAATCAGTTAGACTTCAAGACATTGAGA
TAAAATAGATTAGTGTGTTTTTTATTACATATCAGCTGACTCTAAAAAAG
AAGGAATCATGGAATTTATTTTCAAGACGAAGGAGGCAAAGTATTACAAC
TATTTTAGCATGTGGTGTAGTTACTTGTTCATCTATGTAAAAAGGCATTC
GCTAAATTAACCTTATAAGAAAACCTTTCAAAGTGAACGCACGTGAAGAA
AATACAAAATACAGTTATATTAGATTTAGTAATTTCAAAAAATAAAATCG
TTATGGATATTCCGATTCGTGAAACGCTTCTACTTTTTATGCTATTTTAT
TCGAACAACAATGTCGCTGGATCATCCTCTTCCAATCAAAGTAAGTAACA
GATGACATTTACATATTATTATGTATTTCAAGAATAAGGCTCAGGTCCAA
AACATTGACGAATGAGTCTTCCGACTGACAACTCTCTAATTGTTTTGATT
CAAAATCAGTCTTCTTTTTGGCCCTTAAAACTATTTCATCTGCAGTCAAT
TATGTATAATATTAAATATAATATGGCATATGTACTTGTTTTATAGGTAT
TGTGATATCTTTTGAAGACCGACTCGAAATCATTGATGGAGAATCCACAA
ACGTGATTGAATCTTTCTCCTTATCTCCAACAGTTAACTATATTGTGAGT
ATAACCTCAGATGGACATAAATTATTTTTAAGCGACTATCGGGATGAGGG
AACAACTATCTTCGAAGTTAGTCTTGGAAAAAAATTACAAATCCTTCCTT
TGGTTGAACGTAAGATATTTTTTTATCATAAATCCTTCTAAGATCAATTA
ATTGAAAATATCTTTTCGCTTTTAAGAAAATTCCCTGAATATGGCCGAAG
GAATTGCATTTGATTCAAAGAGCAAAAAGCTATATTTCTCAGACTCCAGA
AAACGTCAAATATCTTCAATTTTATTGACGAAAGAAAAAAAACTTCAGAA
TGTCATAACGATGGATTCGCCACACGGAAAACTTAGGGATGTTGCAATTG
ATTCATGCAATCGCCGTTTATATTGGGTCAACTGGGATTCCAACCGACCA
AGAATTGAATTTTTGAATTTAGATCTCAACTCCTACAATTCATCAGCGAC
TCAGATTTTTATTGATTCCAATTTATCAAAACCTAGAAGTTTAATCTATG
ATTATTGGGATCTTAGATTATACTGGATTGATACAGATGAAAATCATAAA
TATAAAATAGAGCGAGCATTTTCTGATTCGAGTGGAAGGRCAGTTGTTTG
CAAGGGAAATGATAATTCTCCTTATGACATAACTGTTACTGAGAATCATA
TTTTTTGGTCTGATTGGATGAACATGGTAATTTGGCGAGCTCATAAATTT
GGTGATAAATGTGAACTTACAGCTGTGAAACATTTGAAGTCGTCTAGGCC
CATGGGGATCGCATCTCTTTCATTTCCTAATAAGTGCATTGAAAAAGAGT
CTGTGATCAAGTATTCCACCGAGTTAGTTGAAGAAACAAATGATAACATT
ATGAAACCTTCAACAGTGACTATGTCCTCGGAAATATGCCAAAATTACTG
CATACATGGAAATTGCAGTCTGTCTGCAATTAACTTTCCAATTTGTCATT
GCCAATTTGGTTATAGTGGATCTCGCTGTCAAAATGATCTCTGTCATAAC
TATTGCTTGAATAAGGGAATATGTCGCTTTCCTACATCAAATAAAGGCAA
GCCAATTTGTCAGTGTATTGGTGAATTTAATGGAGCACGATGTCAGTTTG
ATATGTAAGTACTACCCTGTAGGTATTTTAATAAGATCATCTAAATTTAA
AGGAGGATCAATGCAAATACTCAATTAAGTGTTTAGATTTTATTTATTTG
TTAACTTGTTCAGCATGCCTAGATTTCATTTTCTTTGCGACGCCATTCTT
TCAAAATGGCGCAAGGACAAATTTGCATGAGTGTATATTAGTAAGTACAT
GGATTGCTTTAATGTACAAACTTAAGCGTTTAGTTCAAAAAGTAAAATAA
TATTTTCTTCCTGATATAATATTTTCTTATATCGCAATAGTTAACAATTA
AAAATACTACAAAAGTAGTCAGAAATTAAAGTAACCTCTAAGTAAAATTA
ATTGTAAAAATGAATTTATATATTCACAGTTAAGGTATTCATTCAGAATT
AATCGGAATTTGAAAGCATAATCGTATGCTTTAAATTTCAGGTCTAAGGA
TCGAAATAATGTTCAACAGATTAAAGAATCTCCAACTTCCAAGGTTTTCC
TCTATGGATTTGTTCTAACTTCATCATCTACGGGATTATTACTCCTGTTG
CTCACTGCTATTACTGTCAGAACATATAGGGAGAAAAAAGGAGTGTATGT
AAGACAAAAAAATAGTTTATCAGAAAAATTTATTGATACTCCTGAGCCAC
CAAAGTCAGAAATATGTATTGGAAAGACGACAAATTGTTCTTCTTTTGTG
GACATTGAAGATTGTTGCCAAATGACTTTATGTGACACAGTAATATTTTT
ATAATTTTTGCTTTATATTTTTTATATTATGACGATTATTTATTTACAGC
CTTGTGTTGAGGCCACATTTCGTAAGCCAAGACGAAGAGGATTAAGCCAC
GGTGATGACGATAAAGCAGTTCTTCTGGATAATGATTCGCTCGTTAACAA
AGAAGAAAACCTTTTTTAAAACTATGATTCTCAAGAAATCGTACGGTAAC
CCTTAGGCAATATGTGCTTTATATACATGAGAGGAGAGATTCCTTCATTC
CAGCTAAAAACATTGTAGTAGTTAAACCAAAGCATTCATTGATTATTTAT
TTTCCAAGATACATAATTGGATAGTAATTTTGAAATTGAACCGAGTTGAT
TTTCACTCACAAATATTCAAGGTTCAATGATATTTATAAATACCTCCTAT
TTGTGATACGAAGAACCTGATGACCTTGATATATTATATATTCGAAAAAG
GAAAAATCACGGTTTCATTATGAAGTACATAATACTCCAAATGTGATACA
TATAATGTGTTATCTTTCAACGCCTTCCGCCCATGTCTTCAATCTGTAAG
CATATTTTGTAGTCCGCAATGCTACTTTCTCACCATGAAGACAAACCAAA
TAATATACTACACATCATTGATTTTTCAAGAAAGAAAAATAATAAGATAG
TTTAAGTATACCATCATCATTAGTACCTACTGAAAAACTGACAGACATGG
ACTTGTAGCAATTCTACTTTCTATTAACAAAAATTCAATATTTTTCAGCA
AGTTTGAATTTAATTTAATGGATAATATTTTTTAAAGCAAGTATTGATAC
TTTGTTTATTACTTATATGCGATTGACTACGTAACCAGATCATCATCGTA
CGTGTTGGTGAGGAATGTTGATTTAACCAAATTTACCCCTTTCTTTTTAT
ATATACAAGTACCATAATTTATACATTTTGTTCTTTTTCATGAAAAAATT
TATATATTCAATGACGGGTGATGTTCTCGTTTTAAGAAAACAGAAATACT
TGTCCATTGTAATTCATTCAGTCGAAATACATAGTATTACTTTTATAGTC
ATAAGTATATAAATATATATATTTATAGTAGAATAAAGACGAATAATTAA
TTATTTAATCTGTTCATTCATATATGTGTTATGCATGTTCACTCCTAAAA
TAGTCTACATGAACTAGGTTACTGTATTAATGTCATATAGTATTAAAACC
TATAAACCAATATCAGTAATAGATCTGTCATTTATAGAGTAAAAAAGAAG
AACAGTAATCATATTGATCGGTCTATCAATGGTGAGTCATCCATAGTTCC
TCCAACCATATCCCCCAATTATAAAACCGTGATTACGGTACTGACATGCA
TATATTGCGCAAAGCCAATGAAGTGAATCTTGACATTTTTTATCATAAAT
AGTAATTTTTCGAAAAAGTTGTATTAATATTTTCTAACCATTGCATTATA
ATCTAAAAGTATATATTTAGCAAAAAGTTATTAGATATTTTCAGTTTATA
ATTTTTCCCTTTTTCCAAAATTTCATGGGCAATGAAATTGCATAGATCCG
TTTATTAGGTACACACAGTGCCAAAAATGCTCCAAATCGGGGCATTAGAC
TCACTAATGAATGTACAATATAGCCTGTGTTATATTACTATATTTCTACT
GGTATGATCCAAGTATAATACGTAATTATAAATATATTGTTTTTTGTAGT
TCTAATTTGTGTAAATGCATTCAAAGAAGTTACAAAAAGAGGTCATTGAA
CACAAGACACTTTATTTTTTATATATTTGTAAAATGATGAGTAAGGAACT
AAAAACTTAATCAGTTGGATAGGATCCAACGGTTTTAATTCCTTAGATGA
TAATTACAATGAAAAAAACTGTTCTTGAAAGTTGTTTTCATGTATCAACT
CTTAGCAAGAAGTTATATCAGTGCTTAGAACAAGTACTACTATTTTTGTA
TATATTTATATAACCAATTAGTAGCTCCTATTTTGACATCATAATATGAC
ATTTAAACGATTTAATAACGTACGCGTAGGAGTGAATTAAATGGTGTGCA
ATAATTGCATAGAAAAATATCATCATAATATCTAAATCAATTTGATCTTT
ATTTTCATAGATCAAGGATGACAACAACATTAATACAAAAACAAGTTAAT
TTTGGCAACAACTAATATTAAAAGCTTTCAATTCTGTTAATTAGAACAAA
AATATATAAGTATGTATGTATGTATCAATTAAAA back to top
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